RNA–Protein interactions for RNA: ENST00000314028.10

CSNK1D-202, Transcript of casein kinase 1 delta, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CSNK1D, Length 3,712 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-202ENST00000314028 AKR1B15C9JRZ8 316 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 ITGA6P23229 1130 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 SPECC1LQ69YQ0 1117 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 CCDC70Q6NSX1 233 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 NUTM2AQ8IVF1 878 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 A0A1W2PQ27 194 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 A0A1W2PQ64 194 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 A0A1W2PQD8 194 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 SLC39A14Q15043 492 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 VPS54Q9P1Q0 977 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 MORC2Q9Y6X9 1032 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 PSDA5PKW4 1024 aaPredicted RBP16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 RBM6P78332 1123 aaKnown RBP16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 POLR3EQ9NVU0 708 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 CEP131Q9UPN4 1083 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 PREX1Q8TCU6 1659 aa16.32■□□□□ 0.2
CSNK1D-202ENST00000314028 SOWAHDA6NJG2 315 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 MTF1Q14872 753 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 ZCRB1Q8TBF4 217 aaKnown RBP16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 WDR24Q96S15 920 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 SLF1Q9BQI6 1058 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 DEF6Q9H4E7 631 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 CTAGE15A4D2H0 777 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 GOLGA6L9A6NEM1 432 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 SLFN14P0C7P3 912 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 CTAGE8P0CG41 777 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 TXLNAP40222 546 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 NLRP5P59047 1200 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 TOGARAM2Q6ZUX3 1019 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 CTAGE6Q86UF2 777 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 CTAGE4Q8IX94 777 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 CRACR2AQ9BSW2 395 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 CTAGE9A4FU28 777 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 TXLNBQ8N3L3 684 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 PLEKHA4Q9H4M7 779 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 JADE2Q9NQC1 790 aa16.31■□□□□ 0.2
CSNK1D-202ENST00000314028 TRIM75PA6NK02 468 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 APOA5Q6Q788 366 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 NYAP1Q6ZVC0 841 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 ENGASEQ8NFI3 743 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 PSMB7Q99436 277 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 SENP2Q9HC62 589 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 TAB2Q9NYJ8 693 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 CTNND2Q9UQB3 1225 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 PLEKHG1Q9ULL1 1385 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 STARD3NLO95772 234 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 MCM7P33993 719 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 ZSCAN26Q16670 478 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 ZNHIT6Q9NWK9 470 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 BAZ2BQ9UIF8 2168 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 CCDC196A0A1B0GTZ2 297 aa16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 NOM1Q5C9Z4 860 aaKnown RBP16.3■□□□□ 0.2
CSNK1D-202ENST00000314028 PDIA6Q15084 440 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 PARD6BQ9BYG5 372 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 CDC25AP30304 524 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 PHKA1P46020 1223 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 USPL1Q5W0Q7 1092 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 TANGO6Q9C0B7 1094 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 PDE11AQ9HCR9 933 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 SH3TC1Q8TE82 1336 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 H0YHG0 523 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 IRS4O14654 1257 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 CUTAO60888 179 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 CYP7A1P22680 504 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 SYCP1Q15431 976 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 NBPF11Q86T75 865 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 DNAJC10Q8IXB1 793 aa16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 V9GY48 417 aaPredicted RBP16.29■□□□□ 0.2
CSNK1D-202ENST00000314028 ZMYND10O75800 440 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 ST5P78524 1137 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 KCNB2Q92953 911 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 OSBPL5Q9H0X9 879 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 CYP27B1O15528 508 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 CDC27P30260 824 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 EXOSC10Q01780 885 aaKnown RBP16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 TSGA10IPQ3SY00 556 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 MROH7-TTC4A0A0A0MT08 1334 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 EFCAB8A8MWE9 144 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 ENC1O14682 589 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 PRKAB2O43741 272 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 SHC4Q6S5L8 630 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 NOSTRINQ8IVI9 506 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 CCDC148Q8NFR7 591 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 SMARCC1Q92922 1105 aaPredicted RBP16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 WWC3Q9ULE0 1092 aa16.28■□□□□ 0.2
CSNK1D-202ENST00000314028 CLTCQ00610 1675 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 SSBP05455 408 aaKnown RBP eCLIP16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 UBXN1Q04323 297 aa16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 TTF1Q15361 905 aaPredicted RBP16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 CCDC181Q5TID7 509 aa16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 RBM43Q6ZSC3 357 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 CDC5LQ99459 802 aaKnown RBP16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 ERBB3P21860 1342 aa16.27■□□□□ 0.2
CSNK1D-202ENST00000314028 CYB5R4Q7L1T6 521 aa16.27■□□□□ 0.19
CSNK1D-202ENST00000314028 ACRBPQ8NEB7 543 aa16.27■□□□□ 0.19
CSNK1D-202ENST00000314028 SDR42E1Q8WUS8 393 aa16.27■□□□□ 0.19
CSNK1D-202ENST00000314028 GREM2Q9H772 168 aa16.27■□□□□ 0.19
CSNK1D-202ENST00000314028 PCDHB6Q9Y5E3 794 aa16.27■□□□□ 0.19
CSNK1D-202ENST00000314028 PRR29P0C7W0 189 aa16.27■□□□□ 0.19
CSNK1D-202ENST00000314028 SLC5A1P13866 664 aa16.27■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms