RNA–Protein interactions for RNA: ENST00000308259.9

MSRB3-201, Transcript of methionine sulfoxide reductase B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MSRB3, Length 4,417 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-201ENST00000308259 AFAP1L1Q8TED9 768 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 ELP1O95163 1332 aa11.91□□□□□ -0.5
MSRB3-201ENST00000308259 MARF1Q9Y4F3 1742 aaKnown RBP11.91□□□□□ -0.5
MSRB3-201ENST00000308259 ZNF609O15014 1411 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 CORO7P57737 925 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 ENOX2Q16206 610 aaKnown RBP11.9□□□□□ -0.5
MSRB3-201ENST00000308259 ARHGAP30Q7Z6I6 1101 aaPredicted RBP11.9□□□□□ -0.5
MSRB3-201ENST00000308259 POTEDQ86YR6 584 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 KIRREL3Q8IZU9 778 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 GJB4Q9NTQ9 266 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 ARHGAP23Q9P227 1491 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 TTC36A6NLP5 189 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 MICAL1Q8TDZ2 1067 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 CABS1Q96KC9 395 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 SLC52A2Q9HAB3 445 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 CACNA1FO60840 1977 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 HNRNPH1P31943 449 aaKnown RBP11.9□□□□□ -0.5
MSRB3-201ENST00000308259 ACTN3Q08043 901 aaPredicted RBP11.9□□□□□ -0.5
MSRB3-201ENST00000308259 DCAF5Q96JK2 942 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 CLSTN2Q9H4D0 955 aa11.9□□□□□ -0.5
MSRB3-201ENST00000308259 DCCP43146 1447 aa11.9□□□□□ -0.51
MSRB3-201ENST00000308259 RESTQ13127 1097 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 KIF4BQ2VIQ3 1234 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 CEP85LQ5SZL2 805 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 CCDC181Q5TID7 509 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 GBP3Q9H0R5 595 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 GOLPH3LQ9H4A5 285 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 SKAP2O75563 359 aaPredicted RBP11.89□□□□□ -0.51
MSRB3-201ENST00000308259 CCAR1Q8IX12 1150 aaKnown RBP11.89□□□□□ -0.51
MSRB3-201ENST00000308259 ZBTB3Q9H5J0 574 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 FAM204AQ9H8W3 233 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 JCADQ9P266 1359 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 ZSCAN12O43309 604 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 IRX1P78414 480 aaPredicted RBP11.89□□□□□ -0.51
MSRB3-201ENST00000308259 CCDC158Q5M9N0 1113 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 CC2D1AQ6P1N0 951 aaPredicted RBP11.89□□□□□ -0.51
MSRB3-201ENST00000308259 PLEKHG2Q9H7P9 1386 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 NFAT5O94916 1531 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 ENO4A6NNW6 628 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 RFX5P48382 616 aaPredicted RBP11.89□□□□□ -0.51
MSRB3-201ENST00000308259 FKBP4Q02790 459 aaKnown RBP eCLIP11.89□□□□□ -0.51
MSRB3-201ENST00000308259 LRRFIP1Q32MZ4 808 aaKnown RBP11.89□□□□□ -0.51
MSRB3-201ENST00000308259 MCMDC2Q4G0Z9 681 aa11.89□□□□□ -0.51
MSRB3-201ENST00000308259 PTPDC1A2A3K4 754 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 ZKSCAN8Q15776 578 aaPredicted RBP11.88□□□□□ -0.51
MSRB3-201ENST00000308259 CFAP100Q494V2 611 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 LRRC24Q50LG9 513 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 WWC2Q6AWC2 1192 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 AOPEPQ8N6M6 819 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 USP28Q96RU2 1077 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 DDX19AQ9NUU7 478 aaKnown RBP11.88□□□□□ -0.51
MSRB3-201ENST00000308259 KIF3CO14782 793 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 ATP5JP18859 108 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 ME1P48163 572 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 TTLL7Q6ZT98 887 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 LRRN4CLQ8ND94 238 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 ARMC2Q8NEN0 867 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 RSRC1Q96IZ7 334 aaKnown RBP11.88□□□□□ -0.51
MSRB3-201ENST00000308259 CTDNEP1O95476 244 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 POLR3DP05423 398 aaPredicted RBP11.88□□□□□ -0.51
MSRB3-201ENST00000308259 H2AFXP16104 143 aaPredicted RBP11.88□□□□□ -0.51
MSRB3-201ENST00000308259 GPR161Q8N6U8 529 aaKnown RBP11.88□□□□□ -0.51
MSRB3-201ENST00000308259 GDAP1L1Q96MZ0 367 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 UTP14AQ9BVJ6 771 aaKnown RBP11.88□□□□□ -0.51
MSRB3-201ENST00000308259 SAMM50Q9Y512 469 aa11.88□□□□□ -0.51
MSRB3-201ENST00000308259 ZEB2O60315 1214 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 PPFIA4O75335 1185 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 PHKG2P15735 406 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 ETF1P62495 437 aaKnown RBP11.87□□□□□ -0.51
MSRB3-201ENST00000308259 NBPF9Q3BBW0 867 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 PARD6BQ9BYG5 372 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 PUS3Q9BZE2 481 aaKnown RBP11.87□□□□□ -0.51
MSRB3-201ENST00000308259 C1orf167Q5SNV9 1468 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 UTYO14607 1347 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 ERBB3P21860 1342 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 EFCAB8A8MWE9 144 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 RBM5P52756 815 aaKnown RBP eCLIP11.87□□□□□ -0.51
MSRB3-201ENST00000308259 ARMC3Q5W041 872 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 SUGP1Q8IWZ8 645 aaKnown RBP11.87□□□□□ -0.51
MSRB3-201ENST00000308259 TEX11Q8IYF3 940 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 CEP112Q8N8E3 955 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 BCAS4Q8TDM0 211 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 CCDC114Q96M63 670 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 HMG20BQ9P0W2 317 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 BIN1O00499 593 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 PPARDQ03181 441 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 KARSQ15046 597 aaKnown RBP11.87□□□□□ -0.51
MSRB3-201ENST00000308259 HEG1Q9ULI3 1381 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 NDUFAB1O14561 156 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 ATP8B1O43520 1251 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 WDHD1O75717 1129 aaPredicted RBP11.87□□□□□ -0.51
MSRB3-201ENST00000308259 IQCA1Q86XH1 822 aa11.87□□□□□ -0.51
MSRB3-201ENST00000308259 SPATA31A6Q5VVP1 1343 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 CYP27B1O15528 508 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 CCDC150Q8NCX0 1101 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 NSUN7Q8NE18 718 aaKnown RBP11.86□□□□□ -0.51
MSRB3-201ENST00000308259 COPRSQ9NQ92 184 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 MED1Q15648 1581 aaPredicted RBP11.86□□□□□ -0.51
MSRB3-201ENST00000308259 GOLGA6L7A0A1B0GV03 622 aa11.86□□□□□ -0.51
MSRB3-201ENST00000308259 A0A1B0GVL5 298 aa11.86□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms