RNA–Protein interactions for RNA: ENST00000302316.12

CCDC7-202, Transcript of coiled-coil domain containing 7, humanhuman

TSL 1 (best)

Gene CCDC7, Length 2,129 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-202ENST00000302316 KRT23Q9C075 422 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 VPS33BQ9H267 617 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 INCENPQ9NQS7 918 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 MCM9Q9NXL9 1143 aa15.34■□□□□ 0.05
CCDC7-202ENST00000302316 RRP12Q5JTH9 1297 aaKnown RBP15.33■□□□□ 0.04
CCDC7-202ENST00000302316 NECAB1Q8N987 351 aa15.33■□□□□ 0.04
CCDC7-202ENST00000302316 NLGN2Q8NFZ4 835 aa15.33■□□□□ 0.04
CCDC7-202ENST00000302316 TEKT1Q969V4 418 aa15.33■□□□□ 0.04
CCDC7-202ENST00000302316 TAOK3Q9H2K8 898 aa15.33■□□□□ 0.04
CCDC7-202ENST00000302316 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.33■□□□□ 0.04
CCDC7-202ENST00000302316 TACC3Q9Y6A5 838 aa15.33■□□□□ 0.04
CCDC7-202ENST00000302316 COL4A5P29400 1685 aa15.33■□□□□ 0.04
CCDC7-202ENST00000302316 ADAMTSL1Q8N6G6 1762 aa15.33■□□□□ 0.04
CCDC7-202ENST00000302316 IARSP41252 1262 aaKnown RBP15.32■□□□□ 0.04
CCDC7-202ENST00000302316 RHBDL3P58872 404 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 APOBRQ0VD83 1088 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 STK3Q13188 491 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 CYB5R4Q7L1T6 521 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 SMIM22K7EJ46 135 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 KDM4AO75164 1064 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 SBK1Q52WX2 424 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 HHIPL2Q6UWX4 724 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 MAPKAPK5Q8IW41 473 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 AMOTL1Q8IY63 956 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 NIM1KQ8IY84 436 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 FBXL16Q8N461 479 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 NKX2-3Q8TAU0 364 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 MKRN1Q9UHC7 482 aaKnown RBP15.32■□□□□ 0.04
CCDC7-202ENST00000302316 FER1L6Q2WGJ9 1857 aa15.32■□□□□ 0.04
CCDC7-202ENST00000302316 USP17L8P0C7I0 530 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 CYP2D6P10635 497 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 CRKP46108 304 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 ST3GAL1Q11201 340 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 ILDR2Q71H61 639 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 GPHNQ9NQX3 736 aaPredicted RBP15.31■□□□□ 0.04
CCDC7-202ENST00000302316 NAP1L2Q9ULW6 460 aaPredicted RBP15.31■□□□□ 0.04
CCDC7-202ENST00000302316 PSME4Q14997 1843 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 CDK5RAP2Q96SN8 1893 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 NFKBIEO00221 500 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 SLC3A2P08195 630 aaKnown RBP15.31■□□□□ 0.04
CCDC7-202ENST00000302316 SLC4A8Q2Y0W8 1093 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 SMC3Q9UQE7 1217 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 FLT1P17948 1338 aa15.31■□□□□ 0.04
CCDC7-202ENST00000302316 RAD17O75943 681 aa15.3■□□□□ 0.04
CCDC7-202ENST00000302316 PCP11498 1178 aaKnown RBP15.3■□□□□ 0.04
CCDC7-202ENST00000302316 EVX2Q03828 476 aa15.3■□□□□ 0.04
CCDC7-202ENST00000302316 GTF3C6Q969F1 213 aa15.3■□□□□ 0.04
CCDC7-202ENST00000302316 TMEM87BQ96K49 555 aa15.3■□□□□ 0.04
CCDC7-202ENST00000302316 ZSWIM5Q9P217 1185 aa15.3■□□□□ 0.04
CCDC7-202ENST00000302316 ANGEL1Q9UNK9 670 aaKnown RBP15.3■□□□□ 0.04
CCDC7-202ENST00000302316 DDX60LQ5H9U9 1706 aaKnown RBP15.3■□□□□ 0.04
CCDC7-202ENST00000302316 MYO3BQ8WXR4 1341 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 SH2B2O14492 632 aaPredicted RBP15.29■□□□□ 0.04
CCDC7-202ENST00000302316 HDLBPQ00341 1268 aaKnown RBP15.29■□□□□ 0.04
CCDC7-202ENST00000302316 C12orf60Q5U649 245 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 ESR2Q92731 530 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 SAP30BPQ9UHR5 308 aaKnown RBP15.29■□□□□ 0.04
CCDC7-202ENST00000302316 ZNRF3Q9ULT6 936 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 PRDM1O75626 825 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 POLR3DP05423 398 aaPredicted RBP15.29■□□□□ 0.04
CCDC7-202ENST00000302316 RBM5P52756 815 aaKnown RBP eCLIP15.29■□□□□ 0.04
CCDC7-202ENST00000302316 NUCB2P80303 420 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 RSBN1LQ6PCB5 846 aaPredicted RBP15.29■□□□□ 0.04
CCDC7-202ENST00000302316 ZDHHC15Q96MV8 337 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 USP40Q9NVE5 1235 aa15.29■□□□□ 0.04
CCDC7-202ENST00000302316 FOCADQ5VW36 1801 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 KLF18A0A0U1RQI7 1052 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 PSMD14O00487 310 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 PFKFB2O60825 505 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 PDE4BQ07343 736 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 RAB3GAP1Q15042 981 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 TMEM67Q5HYA8 995 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 APOBEC3HQ6NTF7 200 aaKnown RBP15.28■□□□□ 0.04
CCDC7-202ENST00000302316 ZNF274Q96GC6 653 aaPredicted RBP15.28■□□□□ 0.04
CCDC7-202ENST00000302316 MRIQ9BWK5 157 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 SERPINA10Q9UK55 444 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 ROBO3Q96MS0 1386 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 IFIT3O14879 490 aaKnown RBP15.28■□□□□ 0.04
CCDC7-202ENST00000302316 RANBP6O60518 1105 aaKnown RBP15.28■□□□□ 0.04
CCDC7-202ENST00000302316 FGRP09769 529 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 EVCP57679 992 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 SCRN1Q12765 414 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 PICALMQ13492 652 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 SART3Q15020 963 aaKnown RBP15.28■□□□□ 0.04
CCDC7-202ENST00000302316 CDC42EP5Q6NZY7 148 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 JDP2Q8WYK2 163 aa15.28■□□□□ 0.04
CCDC7-202ENST00000302316 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.28■□□□□ 0.04
CCDC7-202ENST00000302316 ARFGEF1Q9Y6D6 1849 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 GOLGA8BA8MQT2 603 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 ORC4O43929 436 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 VIL1P09327 827 aaKnown RBP15.27■□□□□ 0.04
CCDC7-202ENST00000302316 GJB2P29033 226 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 PDIA3P30101 505 aaKnown RBP15.27■□□□□ 0.04
CCDC7-202ENST00000302316 PKP1Q13835 747 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 IGDCC4Q8TDY8 1250 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 ZKSCAN3Q9BRR0 538 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 UBAC1Q9BSL1 405 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 BRPF3Q9ULD4 1205 aa15.27■□□□□ 0.04
CCDC7-202ENST00000302316 LTBP3Q9NS15 1303 aa15.27■□□□□ 0.03
CCDC7-202ENST00000302316 ERICH2A1L162 156 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms