RNA–Protein interactions for RNA: ENST00000302206.9

TPM3-202, Transcript of tropomyosin 3, humanhuman

TSL 3 BASIC

Gene TPM3, Length 741 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-202ENST00000302206 PPARAQ07869 468 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 ARHGAP27Q6ZUM4 889 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 CYB5R4Q7L1T6 521 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 SGMS1Q86VZ5 419 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 DZIP1Q86YF9 867 aaKnown RBP14.1□□□□□ -0.15
TPM3-202ENST00000302206 TBC1D22AQ8WUA7 517 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 POLLQ9UGP5 575 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 NEDD4P46934 1319 aa14.1□□□□□ -0.15
TPM3-202ENST00000302206 B4E1Z4 1266 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 FGRP09769 529 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 TGFB2P61812 414 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 DYNLL1P63167 89 aaKnown RBP14.09□□□□□ -0.15
TPM3-202ENST00000302206 CTDSPL2Q05D32 466 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 CSPP1Q1MSJ5 1256 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 SBK1Q52WX2 424 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 CHST3Q7LGC8 479 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 IGDCC4Q8TDY8 1250 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 COA1Q9GZY4 146 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 TMX4Q9H1E5 349 aaPredicted RBP14.09□□□□□ -0.15
TPM3-202ENST00000302206 SUGT1Q9Y2Z0 365 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 NID2Q14112 1375 aa14.09□□□□□ -0.15
TPM3-202ENST00000302206 PCNTO95613 3336 aa14.08□□□□□ -0.15
TPM3-202ENST00000302206 KLF18A0A0U1RQI7 1052 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 C6orf229H3BNL8 230 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 CTDNEP1O95476 244 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 BAG3O95817 575 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 MBD3O95983 291 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 RCAN1P53805 252 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 FOXD4L5Q5VV16 416 aaPredicted RBP14.08□□□□□ -0.16
TPM3-202ENST00000302206 SLF2Q8IX21 1173 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 TMTC2Q8N394 836 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 MPNDQ8N594 471 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 FAM184AQ8NB25 1140 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 FOXD4L4Q8WXT5 416 aaPredicted RBP14.08□□□□□ -0.16
TPM3-202ENST00000302206 BRPF3Q9ULD4 1205 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 ISY1Q9ULR0 285 aaKnown RBP14.08□□□□□ -0.16
TPM3-202ENST00000302206 HPS5Q9UPZ3 1129 aa14.08□□□□□ -0.16
TPM3-202ENST00000302206 DDX49Q9Y6V7 483 aaKnown RBP14.08□□□□□ -0.16
TPM3-202ENST00000302206 LAMB1P07942 1786 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 PTPDC1A2A3K4 754 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 VPS37CA5D8V6 355 aaPredicted RBP14.07□□□□□ -0.16
TPM3-202ENST00000302206 GOLGA8BA8MQT2 603 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 H0YIN7 160 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 JAK2O60674 1132 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 PRPF40AO75400 957 aaKnown RBP14.07□□□□□ -0.16
TPM3-202ENST00000302206 SART3Q15020 963 aaKnown RBP14.07□□□□□ -0.16
TPM3-202ENST00000302206 SLC51AQ86UW1 340 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 C2CD5Q86YS7 1000 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 SDR42E1Q8WUS8 393 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 FAM163AQ96GL9 167 aaPredicted RBP14.07□□□□□ -0.16
TPM3-202ENST00000302206 GPHNQ9NQX3 736 aaPredicted RBP14.07□□□□□ -0.16
TPM3-202ENST00000302206 ZSWIM5Q9P217 1185 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 ARPP21Q9UBL0 812 aaPredicted RBP14.07□□□□□ -0.16
TPM3-202ENST00000302206 TACC3Q9Y6A5 838 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 MROH7-TTC4A0A0A0MT08 1334 aa14.07□□□□□ -0.16
TPM3-202ENST00000302206 ORC4O43929 436 aa14.06□□□□□ -0.16
TPM3-202ENST00000302206 KDM4AO75164 1064 aa14.06□□□□□ -0.16
TPM3-202ENST00000302206 SLC3A2P08195 630 aaKnown RBP14.06□□□□□ -0.16
TPM3-202ENST00000302206 TMEM67Q5HYA8 995 aa14.06□□□□□ -0.16
TPM3-202ENST00000302206 CTR9Q6PD62 1173 aa14.06□□□□□ -0.16
TPM3-202ENST00000302206 DPP8Q6V1X1 898 aaPredicted RBP14.06□□□□□ -0.16
TPM3-202ENST00000302206 ESR2Q92731 530 aa14.06□□□□□ -0.16
TPM3-202ENST00000302206 GPR101Q96P66 508 aaPredicted RBP14.06□□□□□ -0.16
TPM3-202ENST00000302206 EYA3Q99504 573 aa14.06□□□□□ -0.16
TPM3-202ENST00000302206 NOL10Q9BSC4 688 aaKnown RBP14.06□□□□□ -0.16
TPM3-202ENST00000302206 ZSCAN16Q9H4T2 348 aaPredicted RBP14.06□□□□□ -0.16
TPM3-202ENST00000302206 LY9Q9HBG7 655 aa14.06□□□□□ -0.16
TPM3-202ENST00000302206 DCP1AQ9NPI6 582 aaPredicted RBP14.06□□□□□ -0.16
TPM3-202ENST00000302206 AATFQ9NY61 560 aaKnown RBP eCLIP14.06□□□□□ -0.16
TPM3-202ENST00000302206 BRCA1P38398 1863 aaKnown RBP14.06□□□□□ -0.16
TPM3-202ENST00000302206 IFIT3O14879 490 aaKnown RBP14.05□□□□□ -0.16
TPM3-202ENST00000302206 CDKL5O76039 1030 aa14.05□□□□□ -0.16
TPM3-202ENST00000302206 PLCG2P16885 1265 aa14.05□□□□□ -0.16
TPM3-202ENST00000302206 CCT2P78371 535 aaKnown RBP14.05□□□□□ -0.16
TPM3-202ENST00000302206 C9orf131Q5VYM1 1079 aa14.05□□□□□ -0.16
TPM3-202ENST00000302206 CPLX2Q6PUV4 134 aaKnown RBP14.05□□□□□ -0.16
TPM3-202ENST00000302206 APOA5Q6Q788 366 aa14.05□□□□□ -0.16
TPM3-202ENST00000302206 CDC37L1Q7L3B6 337 aa14.05□□□□□ -0.16
TPM3-202ENST00000302206 CNKSR1Q969H4 720 aa14.05□□□□□ -0.16
TPM3-202ENST00000302206 ZC3H12CQ9C0D7 883 aaKnown RBP14.05□□□□□ -0.16
TPM3-202ENST00000302206 NCOA5Q9HCD5 579 aaKnown RBP14.05□□□□□ -0.16
TPM3-202ENST00000302206 NAP1L2Q9ULW6 460 aaPredicted RBP14.05□□□□□ -0.16
TPM3-202ENST00000302206 DDX52Q9Y2R4 599 aaKnown RBP eCLIP14.05□□□□□ -0.16
TPM3-202ENST00000302206 ARFGEF1Q9Y6D6 1849 aa14.05□□□□□ -0.16
TPM3-202ENST00000302206 GPR75-ASB3A0A0A6YYF3 556 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 ERICH2A1L162 156 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 MINDY4BA8MYZ0 360 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 ZBTB43O43298 467 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 DPEP1P16444 411 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 NCLP19338 710 aaKnown RBP14.04□□□□□ -0.16
TPM3-202ENST00000302206 PLCB2Q00722 1185 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 GRIPAP1Q4V328 841 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 CC2D2BQ6DHV5 1058 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 NKX2-3Q8TAU0 364 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 RTFDC1Q9BY42 306 aaPredicted RBP14.04□□□□□ -0.16
TPM3-202ENST00000302206 MKRN1Q9UHC7 482 aaKnown RBP14.04□□□□□ -0.16
TPM3-202ENST00000302206 GAKO14976 1311 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 ROBO3Q96MS0 1386 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 C10orf71Q711Q0 1435 aa14.04□□□□□ -0.16
TPM3-202ENST00000302206 CCDC69A6NI79 296 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms