RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 NAA25Q14CX7 972 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 C14orf37Q86TY3 774 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 OTUD6BQ8N6M0 293 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 KCND1Q9NSA2 647 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 CTAGE9A4FU28 777 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 CASP1P29466 404 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 IRAK1P51617 712 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 NWD1Q149M9 1564 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 MROH7-TTC4A0A0A0MT08 1334 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 STIM1Q13586 685 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 STOX1Q6ZVD7 989 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 USHBP1Q8N6Y0 703 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 FAM76AQ8TAV0 307 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.41■□□□□ 0.22
CDT1-201ENST00000301019 ADGRL3Q9HAR2 1447 aa16.41■□□□□ 0.22
CDT1-201ENST00000301019 SWT1Q5T5J6 900 aaKnown RBP16.4■□□□□ 0.22
CDT1-201ENST00000301019 PROSER2Q86WR7 435 aaPredicted RBP16.4■□□□□ 0.22
CDT1-201ENST00000301019 SLF1Q9BQI6 1058 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 ANKARQ7Z5J8 1434 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 NALCNQ8IZF0 1738 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 ADALQ6DHV7 355 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 LINC00301Q8NCQ3 95 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 IL17RAQ96F46 866 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 ODF2LQ9ULJ1 636 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 SHTN1A0MZ66 631 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 KIAA0754O94854 1291 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 UPP2O95045 317 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 PDHBP11177 359 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 DNA2P51530 1060 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 FMR1Q06787 632 aaKnown RBP eCLIP16.4■□□□□ 0.22
CDT1-201ENST00000301019 CHPF2Q9P2E5 772 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 PCDHA5Q9Y5H7 936 aa16.4■□□□□ 0.22
CDT1-201ENST00000301019 CBFA2T2O43439 604 aa16.39■□□□□ 0.21
CDT1-201ENST00000301019 CCT6AP40227 531 aaKnown RBP16.39■□□□□ 0.21
CDT1-201ENST00000301019 RBL2Q08999 1139 aa16.39■□□□□ 0.21
CDT1-201ENST00000301019 SMYD4Q8IYR2 804 aaPredicted RBP16.39■□□□□ 0.21
CDT1-201ENST00000301019 CAGE1Q8TC20 777 aa16.39■□□□□ 0.21
CDT1-201ENST00000301019 MED4Q9NPJ6 270 aa16.39■□□□□ 0.21
CDT1-201ENST00000301019 ELF1P32519 619 aa16.39■□□□□ 0.21
CDT1-201ENST00000301019 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.39■□□□□ 0.21
CDT1-201ENST00000301019 CEP112Q8N8E3 955 aa16.39■□□□□ 0.21
CDT1-201ENST00000301019 NGDNQ8NEJ9 315 aaKnown RBP16.39■□□□□ 0.21
CDT1-201ENST00000301019 RRP36Q96EU6 259 aaKnown RBP16.39■□□□□ 0.21
CDT1-201ENST00000301019 GNL3LQ9NVN8 582 aaKnown RBP16.39■□□□□ 0.21
CDT1-201ENST00000301019 MON2Q7Z3U7 1717 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 CLNS1AP54105 237 aaKnown RBP16.38■□□□□ 0.21
CDT1-201ENST00000301019 FOXP4Q8IVH2 680 aaPredicted RBP16.38■□□□□ 0.21
CDT1-201ENST00000301019 TBC1D31Q96DN5 1066 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 EEF2KMTQ96G04 330 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 ITSN1Q15811 1721 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 AKAP12Q02952 1782 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 CCDC196A0A1B0GTZ2 297 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 KIF28PB7ZC32 967 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 ZNF185O15231 689 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 TAF5LO75529 589 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 SPECC1LQ69YQ0 1117 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 C8orf76Q96K31 380 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 TEX13AQ9BXU3 409 aaPredicted RBP16.38■□□□□ 0.21
CDT1-201ENST00000301019 CAPS2Q9BXY5 557 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 USP6P35125 1406 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 FMN2Q9NZ56 1722 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 SLC7A5Q01650 507 aa16.38■□□□□ 0.21
CDT1-201ENST00000301019 ZBTB12Q9Y330 459 aaPredicted RBP16.38■□□□□ 0.21
CDT1-201ENST00000301019 KIF20BQ96Q89 1820 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 CCDC82Q8N4S0 544 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 ZKSCAN4Q969J2 545 aaPredicted RBP16.37■□□□□ 0.21
CDT1-201ENST00000301019 CABS1Q96KC9 395 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 CDHR2Q9BYE9 1310 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 UBE2Q2LH0YL09 131 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 USP8P40818 1118 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 SEC24CP53992 1094 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 G3BP1Q13283 466 aaKnown RBP eCLIP16.37■□□□□ 0.21
CDT1-201ENST00000301019 STAMQ92783 540 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 VEZTQ9HBM0 779 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 ANKRD26Q9UPS8 1709 aa16.37■□□□□ 0.21
CDT1-201ENST00000301019 EPB41L2O43491 1005 aaKnown RBP16.36■□□□□ 0.21
CDT1-201ENST00000301019 KCNQ3O43525 872 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 SND1Q7KZF4 910 aaKnown RBP eCLIP16.36■□□□□ 0.21
CDT1-201ENST00000301019 PPFIBP1Q86W92 1011 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 MIEF2Q96C03 454 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 ADGRG1Q9Y653 693 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 RGPD8O14715 1765 aaPredicted RBP16.36■□□□□ 0.21
CDT1-201ENST00000301019 BMP6P22004 513 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 CASP14P31944 242 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 APBA1Q02410 837 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 IFT88Q13099 833 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 CCDC148Q8NFR7 591 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 MMS19Q96T76 1030 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 SMARCAL1Q9NZC9 954 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 HPCAL4Q9UM19 191 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 MAP3K19Q56UN5 1328 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 MYO1BO43795 1136 aa16.36■□□□□ 0.21
CDT1-201ENST00000301019 EZH2Q15910 746 aaKnown RBP16.36■□□□□ 0.21
CDT1-201ENST00000301019 ENO4A6NNW6 628 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 STX10O60499 249 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 ZPR1O75312 459 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 TUBB4AP04350 444 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 PPARAQ07869 468 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 NEDD4P46934 1319 aa16.35■□□□□ 0.21
CDT1-201ENST00000301019 AOX1Q06278 1338 aa16.35■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms