RNA–Protein interactions for RNA: ENST00000297784.9

TMC1-201, Transcript of transmembrane channel like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMC1, Length 3,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC1-201ENST00000297784 USP25Q9UHP3 1055 aa7.8□□□□□ -1.16
TMC1-201ENST00000297784 PRKAB2O43741 272 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 ZSCAN25Q6NSZ9 544 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 MIGA1Q8NAN2 632 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 EPB41L4AQ9HCS5 686 aaPredicted RBP7.79□□□□□ -1.16
TMC1-201ENST00000297784 CGNQ9P2M7 1197 aaKnown RBP7.79□□□□□ -1.16
TMC1-201ENST00000297784 PSME4Q14997 1843 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 GSG1L2A8MUP6 293 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 TGFB2P61812 414 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 DOK7Q18PE1 504 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 CERS5Q8N5B7 392 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 TTLL6Q8N841 843 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 MXD3Q9BW11 206 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 ARMT1Q9H993 441 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 ZSWIM6Q9HCJ5 1215 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 TACC3Q9Y6A5 838 aa7.79□□□□□ -1.16
TMC1-201ENST00000297784 SMIM22K7EJ46 135 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 NEK4P51957 841 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 NCBP1Q09161 790 aaKnown RBP7.78□□□□□ -1.16
TMC1-201ENST00000297784 LRRFIP1Q32MZ4 808 aaKnown RBP7.78□□□□□ -1.16
TMC1-201ENST00000297784 FOCADQ5VW36 1801 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 MBD4O95243 580 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 DYNLL1P63167 89 aaKnown RBP7.78□□□□□ -1.16
TMC1-201ENST00000297784 TMX3Q96JJ7 454 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 COA1Q9GZY4 146 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 RAI14Q9P0K7 980 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 FAM205AQ6ZU69 1335 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 CASTP20810 708 aaKnown RBP7.78□□□□□ -1.16
TMC1-201ENST00000297784 CYP7A1P22680 504 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 MCCP23508 829 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 C17orf53Q8N3J3 647 aaPredicted RBP7.78□□□□□ -1.16
TMC1-201ENST00000297784 FUCA2Q9BTY2 467 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 ZC3H12CQ9C0D7 883 aaKnown RBP7.78□□□□□ -1.16
TMC1-201ENST00000297784 KCNF1Q9H3M0 494 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 DBNDD1Q9H9R9 158 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 FAM53CQ9NYF3 392 aa7.78□□□□□ -1.16
TMC1-201ENST00000297784 U3KPZ7 1027 aaPredicted RBP7.78□□□□□ -1.16
TMC1-201ENST00000297784 YDJCA8MPS7 323 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 SMTNL1A8MU46 457 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 PATL2C9JE40 543 aaKnown RBP7.77□□□□□ -1.17
TMC1-201ENST00000297784 IRX5P78411 483 aaPredicted RBP7.77□□□□□ -1.17
TMC1-201ENST00000297784 EVX2Q03828 476 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 DIXDC1Q155Q3 683 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 AOC3Q16853 763 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 RUFY3Q7L099 469 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 WDR66Q8TBY9 1149 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 AIDAQ96BJ3 306 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 TM6SF1Q9BZW5 370 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 GOLGA6L6A8MZA4 724 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 TULP2O00295 520 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 GTF2IP78347 998 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 TERF2Q15554 542 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 NAA16Q6N069 864 aaPredicted RBP7.77□□□□□ -1.17
TMC1-201ENST00000297784 IFNL3Q8IZI9 196 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 NLGN2Q8NFZ4 835 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 SDR42E1Q8WUS8 393 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 CHAMP1Q96JM3 812 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 JAKMIP1Q96N16 626 aaKnown RBP7.77□□□□□ -1.17
TMC1-201ENST00000297784 LARP6Q9BRS8 491 aaKnown RBP7.77□□□□□ -1.17
TMC1-201ENST00000297784 INCENPQ9NQS7 918 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 ARFGEF1Q9Y6D6 1849 aa7.77□□□□□ -1.17
TMC1-201ENST00000297784 CDK11BP21127 795 aaKnown RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 POLD1P28340 1107 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 MFSD14BQ5SR56 506 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 TIGD1Q96MW7 591 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 AATFQ9NY61 560 aaKnown RBP eCLIP7.76□□□□□ -1.17
TMC1-201ENST00000297784 PIM2Q9P1W9 311 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 PYCARDQ9ULZ3 195 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 ECM29Q5VYK3 1845 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 DDX60LQ5H9U9 1706 aaKnown RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 WDR33Q9C0J8 1336 aaKnown RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 E7EWF7 191 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 LDHBP07195 334 aaKnown RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 AK2P54819 239 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 HAND2P61296 217 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 USP48Q86UV5 1035 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 TCEANC2Q96MN5 208 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 TSPYL1Q9H0U9 437 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 MKRN1Q9UHC7 482 aaKnown RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 CD2APQ9Y5K6 639 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 TIAM2Q8IVF5 1701 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 MAGEB6P1A0A0J9YX57 407 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 GADD45BO75293 160 aaPredicted RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 ZKSCAN1P17029 563 aaPredicted RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 PRELPP51888 382 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 TOB2Q14106 344 aaPredicted RBP7.76□□□□□ -1.17
TMC1-201ENST00000297784 ALX1Q15699 326 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 PODNQ7Z5L7 613 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 PSMD1Q99460 953 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 CALCOCO1Q9P1Z2 691 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 PAXBP1Q9Y5B6 917 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 SLC4A4Q9Y6R1 1079 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 LAMB1P07942 1786 aa7.76□□□□□ -1.17
TMC1-201ENST00000297784 ZMYM6O95789 1325 aa7.75□□□□□ -1.17
TMC1-201ENST00000297784 ECE2O60344 883 aa7.75□□□□□ -1.17
TMC1-201ENST00000297784 EXOSC10Q01780 885 aaKnown RBP7.75□□□□□ -1.17
TMC1-201ENST00000297784 TBC1D10CQ8IV04 446 aa7.75□□□□□ -1.17
TMC1-201ENST00000297784 KIF18AQ8NI77 898 aa7.75□□□□□ -1.17
TMC1-201ENST00000297784 LARGE1O95461 756 aa7.75□□□□□ -1.17
TMC1-201ENST00000297784 RPS6KB1P23443 525 aa7.75□□□□□ -1.17
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms