RNA–Protein interactions for RNA: ENST00000297265.4

CHMP4C-201, Transcript of charged multivesicular body protein 4C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP4C, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4C-201ENST00000297265 H3BQV1 296 aa15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 DHX16O60231 1041 aaKnown RBP15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 MMP10P09238 476 aa15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 KRT85P78386 507 aa15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 IFFO2Q5TF58 517 aa15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 SPTY2D1Q68D10 685 aaPredicted RBP15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 ZKSCAN3Q9BRR0 538 aa15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 MTA3Q9BTC8 594 aa15.93■□□□□ 0.14
CHMP4C-201ENST00000297265 DUOX1Q9NRD9 1551 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 IFIT3O14879 490 aaKnown RBP15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 IGSF3O75054 1194 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 SEC23AQ15436 765 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 RRP12Q5JTH9 1297 aaKnown RBP15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 OLFM4Q6UX06 510 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 MYL10Q9BUA6 226 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 RNF41Q9H4P4 317 aaPredicted RBP15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 GJB4Q9NTQ9 266 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 ATP6V0A2Q9Y487 856 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 COL11A2P13942 1736 aaPredicted RBP15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 NID2Q14112 1375 aa15.92■□□□□ 0.14
CHMP4C-201ENST00000297265 SYCE3A1L190 88 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 PPEF1O14829 653 aaPredicted RBP15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 LDHBP07195 334 aaKnown RBP15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 METAP2P50579 478 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 FOSBP53539 338 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 OTUD7BQ6GQQ9 843 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 CAMKK2Q96RR4 588 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 ANO8Q9HCE9 1232 aaPredicted RBP15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 ORC3Q9UBD5 711 aaPredicted RBP15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 ZBTB43O43298 467 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 GUCY1B3Q02153 619 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 DIXDC1Q155Q3 683 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 TMC4Q7Z404 712 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 FBXO18Q8NFZ0 1043 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 LEO1Q8WVC0 666 aaPredicted RBP15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 ATP8A2Q9NTI2 1148 aa15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 DDX52Q9Y2R4 599 aaKnown RBP eCLIP15.91■□□□□ 0.14
CHMP4C-201ENST00000297265 RANBP6O60518 1105 aaKnown RBP15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 NPR1P16066 1061 aa15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 PPP4CP60510 307 aa15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 EZH2Q15910 746 aaKnown RBP15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 SBK1Q52WX2 424 aa15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 MSL1Q68DK7 614 aa15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 LRSAM1Q6UWE0 723 aa15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 MICU3Q86XE3 530 aa15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 DZIP1Q86YF9 867 aaKnown RBP15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 CRNKL1Q9BZJ0 848 aaKnown RBP15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 SCAND2PQ9GZW5 306 aaPredicted RBP15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 KIF3AQ9Y496 699 aa15.9■□□□□ 0.14
CHMP4C-201ENST00000297265 CSPP1Q1MSJ5 1256 aa15.89■□□□□ 0.13
CHMP4C-201ENST00000297265 CCDC144CPQ8IYA2 1237 aa15.89■□□□□ 0.13
CHMP4C-201ENST00000297265 PGBD1Q96JS3 809 aa15.89■□□□□ 0.13
CHMP4C-201ENST00000297265 AIFM3Q96NN9 605 aa15.89■□□□□ 0.13
CHMP4C-201ENST00000297265 TOMM22Q9NS69 142 aa15.89■□□□□ 0.13
CHMP4C-201ENST00000297265 LAMB1P07942 1786 aa15.89■□□□□ 0.13
CHMP4C-201ENST00000297265 UBE2Q2LH0YL09 131 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 CPLX1O14810 134 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 CYP2D6P10635 497 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 NFXL1Q6ZNB6 911 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 ESR2Q92731 530 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 PHKBQ93100 1093 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 RTFDC1Q9BY42 306 aaPredicted RBP15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 RBSNQ9H1K0 784 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 SLC12A7Q9Y666 1083 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 PARP3Q9Y6F1 533 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 ECM29Q5VYK3 1845 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 PRDM1O75626 825 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 PDE6BP35913 854 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 EN1Q05925 392 aaPredicted RBP15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 WTAPQ15007 396 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 RGS22Q8NE09 1264 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 SH3RF3Q8TEJ3 882 aaPredicted RBP15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 SPATA32Q96LK8 384 aa15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 FTOQ9C0B1 505 aaKnown RBP eCLIP15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 GOLGB1Q14789 3259 aaKnown RBP15.88■□□□□ 0.13
CHMP4C-201ENST00000297265 FAM205AQ6ZU69 1335 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 CDK5RAP2Q96SN8 1893 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 CCDC69A6NI79 296 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 C6orf229H3BNL8 230 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 ORC4O43929 436 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 USP17L8P0C7I0 530 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 PCP11498 1178 aaKnown RBP15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 SLC15A2Q16348 729 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 TPRNQ4KMQ1 711 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 TMTC2Q8N394 836 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 ENAHQ8N8S7 591 aaPredicted RBP15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 C8orf76Q96K31 380 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 DLEC1Q9Y238 1755 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 TNKSO95271 1327 aa15.87■□□□□ 0.13
CHMP4C-201ENST00000297265 GOLGA8AA7E2F4 631 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 ALDH1B1P30837 517 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 NBPF11Q86T75 865 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 FAM163AQ96GL9 167 aaPredicted RBP15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 MASTLQ96GX5 879 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 USP28Q96RU2 1077 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 RCOR1Q9UKL0 485 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 MROH7-TTC4A0A0A0MT08 1334 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 GPR75-ASB3A0A0A6YYF3 556 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 KIF28PB7ZC32 967 aa15.86■□□□□ 0.13
CHMP4C-201ENST00000297265 IFNAR1P17181 557 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms