RNA–Protein interactions for RNA: ENST00000292808.5

ABCF3-201, Transcript of ATP binding cassette subfamily F member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene ABCF3, Length 2,453 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-201ENST00000292808 TMEM87BQ96K49 555 aa16.45■□□□□ 0.22
ABCF3-201ENST00000292808 AATFQ9NY61 560 aaKnown RBP eCLIP16.45■□□□□ 0.22
ABCF3-201ENST00000292808 MSL1Q68DK7 614 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 STK11IPQ8N1F8 1099 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 CNNM2Q9H8M5 875 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 CD209Q9NNX6 404 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 PPEF1O14829 653 aaPredicted RBP16.44■□□□□ 0.22
ABCF3-201ENST00000292808 APOA5Q6Q788 366 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 SGMS1Q86VZ5 419 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 KRT23Q9C075 422 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 MYH2Q9UKX2 1941 aa16.44■□□□□ 0.22
ABCF3-201ENST00000292808 IL1R1P14778 569 aa16.43■□□□□ 0.22
ABCF3-201ENST00000292808 UVSSAQ2YD98 709 aa16.43■□□□□ 0.22
ABCF3-201ENST00000292808 WDR66Q8TBY9 1149 aa16.43■□□□□ 0.22
ABCF3-201ENST00000292808 MINDY4BA8MYZ0 360 aa16.43■□□□□ 0.22
ABCF3-201ENST00000292808 CTR9Q6PD62 1173 aa16.43■□□□□ 0.22
ABCF3-201ENST00000292808 OLFM4Q6UX06 510 aa16.43■□□□□ 0.22
ABCF3-201ENST00000292808 SP8Q8IXZ3 490 aa16.43■□□□□ 0.22
ABCF3-201ENST00000292808 RXRAP19793 462 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 TMEM67Q5HYA8 995 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 RRP12Q5JTH9 1297 aaKnown RBP16.42■□□□□ 0.22
ABCF3-201ENST00000292808 SPATA32Q96LK8 384 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 CAMKK2Q96RR4 588 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 ATP6V0A2Q9Y487 856 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 CDK5RAP2Q96SN8 1893 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 QSER1Q2KHR3 1735 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 LIFRP42702 1097 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 EZH2Q15910 746 aaKnown RBP16.42■□□□□ 0.22
ABCF3-201ENST00000292808 SPTY2D1Q68D10 685 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-201ENST00000292808 GIMAP6Q6P9H5 292 aa16.42■□□□□ 0.22
ABCF3-201ENST00000292808 DZIP1Q86YF9 867 aaKnown RBP16.42■□□□□ 0.22
ABCF3-201ENST00000292808 DCP1AQ9NPI6 582 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-201ENST00000292808 FAM217BQ9NTX9 383 aaPredicted RBP16.42■□□□□ 0.22
ABCF3-201ENST00000292808 ELP1O95163 1332 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 LDHBP07195 334 aaKnown RBP16.41■□□□□ 0.22
ABCF3-201ENST00000292808 CDC27P30260 824 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 DIXDC1Q155Q3 683 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 TMED8Q6PL24 325 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-201ENST00000292808 ZKSCAN3Q9BRR0 538 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 MYL10Q9BUA6 226 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 NOL7Q9UMY1 257 aaKnown RBP16.41■□□□□ 0.22
ABCF3-201ENST00000292808 DLEC1Q9Y238 1755 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 IFIT3O14879 490 aaKnown RBP16.41■□□□□ 0.22
ABCF3-201ENST00000292808 FGRP09769 529 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 NPR1P16066 1061 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 GUCY1B3Q02153 619 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 TMC4Q7Z404 712 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 SCAND2PQ9GZW5 306 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-201ENST00000292808 RNF41Q9H4P4 317 aaPredicted RBP16.41■□□□□ 0.22
ABCF3-201ENST00000292808 PARP3Q9Y6F1 533 aa16.41■□□□□ 0.22
ABCF3-201ENST00000292808 NID2Q14112 1375 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 USP17L12C9JPN9 530 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 USP17L21D6R901 530 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 ADD1P35611 737 aaKnown RBP16.4■□□□□ 0.22
ABCF3-201ENST00000292808 EN1Q05925 392 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-201ENST00000292808 LEO1Q8WVC0 666 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-201ENST00000292808 KIF3AQ9Y496 699 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 GOLGA6L4A6NEF3 574 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 CYP2D6P10635 497 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 METAP2P50579 478 aaKnown RBP eCLIP16.4■□□□□ 0.22
ABCF3-201ENST00000292808 ILDR1Q86SU0 546 aaPredicted RBP16.4■□□□□ 0.22
ABCF3-201ENST00000292808 MICU3Q86XE3 530 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 CHMP4CQ96CF2 233 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 CRNKL1Q9BZJ0 848 aaKnown RBP16.4■□□□□ 0.22
ABCF3-201ENST00000292808 TOMM22Q9NS69 142 aa16.4■□□□□ 0.22
ABCF3-201ENST00000292808 MKRN1Q9UHC7 482 aaKnown RBP16.4■□□□□ 0.22
ABCF3-201ENST00000292808 DHX16O60231 1041 aaKnown RBP16.39■□□□□ 0.21
ABCF3-201ENST00000292808 IGSF3O75054 1194 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 SEC23AQ15436 765 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 NTRK3Q16288 839 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 ZSCAN16Q9H4T2 348 aaPredicted RBP16.39■□□□□ 0.21
ABCF3-201ENST00000292808 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.39■□□□□ 0.21
ABCF3-201ENST00000292808 NAV1Q8NEY1 1877 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 C6orf229H3BNL8 230 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 ZBTB43O43298 467 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 LIG1P18858 919 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 MSNP26038 577 aaKnown RBP16.39■□□□□ 0.21
ABCF3-201ENST00000292808 CEBPZQ03701 1054 aaKnown RBP16.39■□□□□ 0.21
ABCF3-201ENST00000292808 SLC15A2Q16348 729 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 OTUD7BQ6GQQ9 843 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 CCDC144CPQ8IYA2 1237 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 GJB4Q9NTQ9 266 aa16.39■□□□□ 0.21
ABCF3-201ENST00000292808 ORC3Q9UBD5 711 aaPredicted RBP16.39■□□□□ 0.21
ABCF3-201ENST00000292808 DDX60LQ5H9U9 1706 aaKnown RBP16.38■□□□□ 0.21
ABCF3-201ENST00000292808 RANBP6O60518 1105 aaKnown RBP16.38■□□□□ 0.21
ABCF3-201ENST00000292808 PDE6BP35913 854 aa16.38■□□□□ 0.21
ABCF3-201ENST00000292808 NFXL1Q6ZNB6 911 aa16.38■□□□□ 0.21
ABCF3-201ENST00000292808 SH3RF3Q8TEJ3 882 aaPredicted RBP16.38■□□□□ 0.21
ABCF3-201ENST00000292808 MTA3Q9BTC8 594 aa16.38■□□□□ 0.21
ABCF3-201ENST00000292808 RTFDC1Q9BY42 306 aaPredicted RBP16.38■□□□□ 0.21
ABCF3-201ENST00000292808 ATP8A2Q9NTI2 1148 aa16.38■□□□□ 0.21
ABCF3-201ENST00000292808 PRDM1O75626 825 aa16.38■□□□□ 0.21
ABCF3-201ENST00000292808 FUCA2Q9BTY2 467 aa16.38■□□□□ 0.21
ABCF3-201ENST00000292808 MROH7-TTC4A0A0A0MT08 1334 aa16.37■□□□□ 0.21
ABCF3-201ENST00000292808 GOLGA8AA7E2F4 631 aa16.37■□□□□ 0.21
ABCF3-201ENST00000292808 CPLX1O14810 134 aa16.37■□□□□ 0.21
ABCF3-201ENST00000292808 PPP4CP60510 307 aa16.37■□□□□ 0.21
ABCF3-201ENST00000292808 SBK1Q52WX2 424 aa16.37■□□□□ 0.21
ABCF3-201ENST00000292808 MASTLQ96GX5 879 aa16.37■□□□□ 0.21
ABCF3-201ENST00000292808 AIFM3Q96NN9 605 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms