RNA–Protein interactions for RNA: ENST00000288462.4

C9orf43-201, Transcript of chromosome 9 open reading frame 43, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf43, Length 2,130 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf43-201ENST00000288462 LDHBP07195 334 aaKnown RBP11.92□□□□□ -0.5
C9orf43-201ENST00000288462 SRGNP10124 158 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 METAP2P50579 478 aaKnown RBP eCLIP11.92□□□□□ -0.5
C9orf43-201ENST00000288462 RCAN1P53805 252 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 SCAND2PQ9GZW5 306 aaPredicted RBP11.92□□□□□ -0.5
C9orf43-201ENST00000288462 ATP8A2Q9NTI2 1148 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 AATFQ9NY61 560 aaKnown RBP eCLIP11.92□□□□□ -0.5
C9orf43-201ENST00000288462 POLLQ9UGP5 575 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 JAG2Q9Y219 1238 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 ATP6V0A2Q9Y487 856 aa11.92□□□□□ -0.5
C9orf43-201ENST00000288462 MINDY4BA8MYZ0 360 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 CPLX1O14810 134 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 ZBTB43O43298 467 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 MMP10P09238 476 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 NPR1P16066 1061 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 GSTO1P78417 241 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 SART3Q15020 963 aaKnown RBP11.91□□□□□ -0.5
C9orf43-201ENST00000288462 SBK1Q52WX2 424 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 CTR9Q6PD62 1173 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 RAB11FIP4Q86YS3 637 aa11.91□□□□□ -0.5
C9orf43-201ENST00000288462 DCP1AQ9NPI6 582 aaPredicted RBP11.91□□□□□ -0.5
C9orf43-201ENST00000288462 ORC3Q9UBD5 711 aaPredicted RBP11.91□□□□□ -0.5
C9orf43-201ENST00000288462 CDKL5O76039 1030 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 RRP12Q5JTH9 1297 aaKnown RBP11.9□□□□□ -0.5
C9orf43-201ENST00000288462 POTEAQ6S8J7 498 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 MICU3Q86XE3 530 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 ESR2Q92731 530 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 ARPP21Q9UBL0 812 aaPredicted RBP11.9□□□□□ -0.5
C9orf43-201ENST00000288462 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.9□□□□□ -0.5
C9orf43-201ENST00000288462 PARP3Q9Y6F1 533 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 ZNF646O15015 1829 aaPredicted RBP11.9□□□□□ -0.5
C9orf43-201ENST00000288462 STK36Q9NRP7 1315 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 CYP2D7A0A087X1C5 515 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 GOLGA8AA7E2F4 631 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 SMIM22K7EJ46 135 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 CDC27P30260 824 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 PDE6BP35913 854 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 SEC23AQ15436 765 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 NTRK3Q16288 839 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 GRIK5Q16478 980 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 LRSAM1Q6UWE0 723 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 NFXL1Q6ZNB6 911 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 LEO1Q8WVC0 666 aaPredicted RBP11.9□□□□□ -0.5
C9orf43-201ENST00000288462 FAM217BQ9NTX9 383 aaPredicted RBP11.9□□□□□ -0.5
C9orf43-201ENST00000288462 SLC12A7Q9Y666 1083 aa11.9□□□□□ -0.5
C9orf43-201ENST00000288462 ROBO3Q96MS0 1386 aa11.9□□□□□ -0.51
C9orf43-201ENST00000288462 MROH7-TTC4A0A0A0MT08 1334 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 FAM205AQ6ZU69 1335 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 SYCE3A1L190 88 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 CCDC69A6NI79 296 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 USP17L12C9JPN9 530 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 USP17L21D6R901 530 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 ORC4O43929 436 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 ADD1P35611 737 aaKnown RBP11.89□□□□□ -0.51
C9orf43-201ENST00000288462 FOSBP53539 338 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 PPP4CP60510 307 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 WTAPQ15007 396 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 CCDC183Q5T5S1 534 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 ATL3Q6DD88 541 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 TMTC2Q8N394 836 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 C8orf76Q96K31 380 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 TOMM22Q9NS69 142 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 MKRN1Q9UHC7 482 aaKnown RBP11.89□□□□□ -0.51
C9orf43-201ENST00000288462 MYH6P13533 1939 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 PPFIA3O75145 1194 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 RXRAP19793 462 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 CPLX2Q6PUV4 134 aaKnown RBP11.89□□□□□ -0.51
C9orf43-201ENST00000288462 ILDR1Q86SU0 546 aaPredicted RBP11.89□□□□□ -0.51
C9orf43-201ENST00000288462 KLHL34Q8N239 644 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 FBXO18Q8NFZ0 1043 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 SPATA32Q96LK8 384 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 UBAC1Q9BSL1 405 aa11.89□□□□□ -0.51
C9orf43-201ENST00000288462 RTFDC1Q9BY42 306 aaPredicted RBP11.89□□□□□ -0.51
C9orf43-201ENST00000288462 ANO8Q9HCE9 1232 aaPredicted RBP11.89□□□□□ -0.51
C9orf43-201ENST00000288462 TNKSO95271 1327 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 ERICH2A1L162 156 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 RANBP6O60518 1105 aaKnown RBP11.88□□□□□ -0.51
C9orf43-201ENST00000288462 LDHCP07864 332 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 ALDH1B1P30837 517 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 CERS3Q8IU89 383 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 MASTLQ96GX5 879 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 CAMKK2Q96RR4 588 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 ZKSCAN3Q9BRR0 538 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 MYL10Q9BUA6 226 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 PANK2Q9BZ23 570 aa11.88□□□□□ -0.51
C9orf43-201ENST00000288462 C6orf229H3BNL8 230 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 NT5C2P49902 561 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 GUCY1B3Q02153 619 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 DIXDC1Q155Q3 683 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 MSL1Q68DK7 614 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 STK11IPQ8N1F8 1099 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 TBC1D22AQ8WUA7 517 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 TFIP11Q9UBB9 837 aaKnown RBP11.87□□□□□ -0.51
C9orf43-201ENST00000288462 CFAP45Q9UL16 551 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 GAKO14976 1311 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 IFNAR1P17181 557 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 SYNE3Q6ZMZ3 975 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 ZNF654Q8IZM8 581 aa11.87□□□□□ -0.51
C9orf43-201ENST00000288462 ENAHQ8N8S7 591 aaPredicted RBP11.87□□□□□ -0.51
C9orf43-201ENST00000288462 SH3RF3Q8TEJ3 882 aaPredicted RBP11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms