RNA–Protein interactions for RNA: ENST00000273342.8

COL8A1-202, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 2 BASIC

Gene COL8A1, Length 3,029 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-202ENST00000273342 TOMM22Q9NS69 142 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 CEP126Q9P2H0 1117 aa14.79□□□□□ -0.04
COL8A1-202ENST00000273342 KDM3BQ7LBC6 1761 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 BTBD18B2RXH4 712 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 PTPAQ15257 358 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 SMYD4Q8IYR2 804 aaPredicted RBP14.78□□□□□ -0.04
COL8A1-202ENST00000273342 CCDC102AQ96A19 550 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 PNKPQ96T60 521 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 SEC31BQ9NQW1 1179 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 MAN1B1Q9UKM7 699 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 MED1Q15648 1581 aaPredicted RBP14.78□□□□□ -0.04
COL8A1-202ENST00000273342 EYA2O00167 538 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 A1BGP04217 495 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 TUBB4AP04350 444 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 AFMP43652 599 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 TRIM29Q14134 588 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 KIF4BQ2VIQ3 1234 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 RSRC2Q7L4I2 434 aaKnown RBP14.78□□□□□ -0.04
COL8A1-202ENST00000273342 PROSER2Q86WR7 435 aaPredicted RBP14.78□□□□□ -0.04
COL8A1-202ENST00000273342 JMYQ8N9B5 988 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 STAMQ92783 540 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 HINFPQ9BQA5 517 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 ZKSCAN3Q9BRR0 538 aa14.78□□□□□ -0.04
COL8A1-202ENST00000273342 IL15P40933 162 aaPredicted RBP14.77□□□□□ -0.04
COL8A1-202ENST00000273342 XAGE2Q96GT9 111 aa14.77□□□□□ -0.04
COL8A1-202ENST00000273342 AK7Q96M32 723 aa14.77□□□□□ -0.04
COL8A1-202ENST00000273342 GDAP1L1Q96MZ0 367 aa14.77□□□□□ -0.04
COL8A1-202ENST00000273342 CDC5LQ99459 802 aaKnown RBP14.77□□□□□ -0.04
COL8A1-202ENST00000273342 HPSEQ9Y251 543 aa14.77□□□□□ -0.04
COL8A1-202ENST00000273342 UBR1Q8IWV7 1749 aa14.77□□□□□ -0.05
COL8A1-202ENST00000273342 IDH1O75874 414 aaKnown RBP14.77□□□□□ -0.05
COL8A1-202ENST00000273342 GUCY1A2P33402 732 aa14.77□□□□□ -0.05
COL8A1-202ENST00000273342 TXLNAP40222 546 aa14.77□□□□□ -0.05
COL8A1-202ENST00000273342 CASP7P55210 303 aa14.77□□□□□ -0.05
COL8A1-202ENST00000273342 RRP12Q5JTH9 1297 aaKnown RBP14.77□□□□□ -0.05
COL8A1-202ENST00000273342 KRT28Q7Z3Y7 464 aa14.77□□□□□ -0.05
COL8A1-202ENST00000273342 LRP10Q7Z4F1 713 aa14.77□□□□□ -0.05
COL8A1-202ENST00000273342 TBC1D10CQ8IV04 446 aa14.77□□□□□ -0.05
COL8A1-202ENST00000273342 TEX13AQ9BXU3 409 aaPredicted RBP14.77□□□□□ -0.05
COL8A1-202ENST00000273342 IARSP41252 1262 aaKnown RBP14.76□□□□□ -0.05
COL8A1-202ENST00000273342 TAF7LQ5H9L4 462 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 SLC9C2Q5TAH2 1124 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 RESP18Q5W5W9 173 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 RAD9BQ6WBX8 426 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 RABGGTAQ92696 567 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 RASSF4Q9H2L5 321 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 FAN1Q9Y2M0 1017 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 ABCC6O95255 1503 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 LAMA4Q16363 1823 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 STX10O60499 249 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 POSTNQ15063 836 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 JAKMIP3Q5VZ66 844 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 MED15Q96RN5 788 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 ABCB6Q9NP58 842 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 SLIT1O75093 1534 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 RBL2Q08999 1139 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 MAP3K14Q99558 947 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 UBXN6Q9BZV1 441 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 RAI14Q9P0K7 980 aa14.76□□□□□ -0.05
COL8A1-202ENST00000273342 RANBP6O60518 1105 aaKnown RBP14.75□□□□□ -0.05
COL8A1-202ENST00000273342 CCDC175P0C221 793 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 NR5A1Q13285 461 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 RGS22Q8NE09 1264 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 ACRBPQ8NEB7 543 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 CWC25Q9NXE8 425 aaPredicted RBP14.75□□□□□ -0.05
COL8A1-202ENST00000273342 ANGEL1Q9UNK9 670 aaKnown RBP14.75□□□□□ -0.05
COL8A1-202ENST00000273342 LTN1O94822 1766 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 GOLGA8AA7E2F4 631 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 NBPF26B4DH59 902 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 PHKG2P15735 406 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 NBPF14Q5TI25 921 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 NBPF10Q6P3W6 841 aaKnown RBP14.75□□□□□ -0.05
COL8A1-202ENST00000273342 APOA5Q6Q788 366 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 SYNE4Q8N205 404 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 NBPF15Q8N660 670 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 ANKZF1Q9H8Y5 726 aa14.75□□□□□ -0.05
COL8A1-202ENST00000273342 CDC25AP30304 524 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 CCT6AP40227 531 aaKnown RBP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 CABP4P57796 275 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 FAM193AP78312 1265 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 TBX2Q13207 712 aaPredicted RBP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 IGSF22Q8N9C0 903 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 KRI1Q8N9T8 703 aaKnown RBP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 PLBD2Q8NHP8 589 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 GNL3Q9BVP2 549 aaKnown RBP eCLIP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 NBPF3Q9H094 633 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 hCG_1642624A0A1W2PR95 340 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 CUTAO60888 179 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 DHX8Q14562 1220 aaKnown RBP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 CCDC57Q2TAC2 916 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 LEKR1Q6ZMV7 388 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 PPFIBP1Q86W92 1011 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 CHMP4CQ96CF2 233 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 RRP15Q9Y3B9 282 aaKnown RBP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 AKR1B15C9JRZ8 316 aaPredicted RBP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 ZBTB43O43298 467 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 KIF5CO60282 957 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 CPLX2Q6PUV4 134 aaKnown RBP14.74□□□□□ -0.05
COL8A1-202ENST00000273342 FAM89AQ96GI7 184 aa14.74□□□□□ -0.05
COL8A1-202ENST00000273342 PCDHB6Q9Y5E3 794 aa14.74□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms