RNA–Protein interactions for RNA: ENST00000265304.10

SSBP1-201, Transcript of single stranded DNA binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSBP1, Length 687 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-201ENST00000265304 DCPSQ96C86 337 aaKnown RBP17.14■□□□□ 0.33
SSBP1-201ENST00000265304 IL25Q9H293 177 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 DDX4Q9NQI0 724 aaKnown RBP17.14■□□□□ 0.33
SSBP1-201ENST00000265304 TMOD2Q9NZR1 351 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 ZMYM6O95789 1325 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 CCDC171Q6TFL3 1326 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 SIPA1L1O43166 1804 aa17.14■□□□□ 0.33
SSBP1-201ENST00000265304 CLRN2A0PK11 232 aa17.13■□□□□ 0.33
SSBP1-201ENST00000265304 PATL2C9JE40 543 aaKnown RBP17.13■□□□□ 0.33
SSBP1-201ENST00000265304 EAPPQ56P03 285 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-201ENST00000265304 CWC27Q6UX04 472 aaKnown RBP17.13■□□□□ 0.33
SSBP1-201ENST00000265304 ZNF589Q86UQ0 364 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-201ENST00000265304 ESYT1Q9BSJ8 1104 aa17.13■□□□□ 0.33
SSBP1-201ENST00000265304 DEFB129Q9H1M3 183 aa17.13■□□□□ 0.33
SSBP1-201ENST00000265304 DCP1AQ9NPI6 582 aaPredicted RBP17.13■□□□□ 0.33
SSBP1-201ENST00000265304 TNNI2P48788 182 aa17.12■□□□□ 0.33
SSBP1-201ENST00000265304 RASA3Q14644 834 aa17.12■□□□□ 0.33
SSBP1-201ENST00000265304 SBK1Q52WX2 424 aa17.12■□□□□ 0.33
SSBP1-201ENST00000265304 OSBPL5Q9H0X9 879 aaPredicted RBP17.12■□□□□ 0.33
SSBP1-201ENST00000265304 DHX36Q9H2U1 1008 aaKnown RBP17.12■□□□□ 0.33
SSBP1-201ENST00000265304 FLT1P17948 1338 aa17.12■□□□□ 0.33
SSBP1-201ENST00000265304 EPB41L2O43491 1005 aaKnown RBP17.11■□□□□ 0.33
SSBP1-201ENST00000265304 PRKAB2O43741 272 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 HSPD1P10809 573 aaKnown RBP17.11■□□□□ 0.33
SSBP1-201ENST00000265304 CACNB3P54284 484 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 FSTL1Q12841 308 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 SH3BP5LQ7L8J4 393 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 KRT26Q7Z3Y9 468 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 SULF1Q8IWU6 871 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 ZFPM1Q8IX07 1006 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 TGFBRAP1Q8WUH2 860 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 DSCC1Q9BVC3 393 aa17.11■□□□□ 0.33
SSBP1-201ENST00000265304 LAMA4Q16363 1823 aa17.1■□□□□ 0.33
SSBP1-201ENST00000265304 TBC1D12O60347 775 aa17.1■□□□□ 0.33
SSBP1-201ENST00000265304 IFNL3Q8IZI9 196 aa17.1■□□□□ 0.33
SSBP1-201ENST00000265304 SMC1BQ8NDV3 1235 aa17.1■□□□□ 0.33
SSBP1-201ENST00000265304 EPB41L4AQ9HCS5 686 aaPredicted RBP17.1■□□□□ 0.33
SSBP1-201ENST00000265304 SLC4A4Q9Y6R1 1079 aa17.1■□□□□ 0.33
SSBP1-201ENST00000265304 PASKQ96RG2 1323 aa17.1■□□□□ 0.33
SSBP1-201ENST00000265304 TCP10L2B9ZVM9 353 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 VPS53Q5VIR6 699 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 MAP1SQ66K74 1059 aaPredicted RBP17.09■□□□□ 0.33
SSBP1-201ENST00000265304 CCDC129Q6ZRS4 1044 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 USP48Q86UV5 1035 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 SDR42E1Q8WUS8 393 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 MAP4K1Q92918 833 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 EHD4Q9H223 541 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 VEZTQ9HBM0 779 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 CLEC11AQ9Y240 323 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 LAMB1P07942 1786 aa17.09■□□□□ 0.33
SSBP1-201ENST00000265304 PAPPA2Q9BXP8 1791 aa17.08■□□□□ 0.33
SSBP1-201ENST00000265304 DDTLA6NHG4 134 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-201ENST00000265304 FGAP02671 866 aa17.08■□□□□ 0.32
SSBP1-201ENST00000265304 C12orf60Q5U649 245 aa17.08■□□□□ 0.32
SSBP1-201ENST00000265304 CASC1Q6TDU7 716 aa17.08■□□□□ 0.32
SSBP1-201ENST00000265304 FOXP4Q8IVH2 680 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-201ENST00000265304 MAPKAPK5Q8IW41 473 aa17.08■□□□□ 0.32
SSBP1-201ENST00000265304 GLIS2Q9BZE0 524 aaPredicted RBP17.08■□□□□ 0.32
SSBP1-201ENST00000265304 TMEM39BQ9GZU3 492 aa17.08■□□□□ 0.32
SSBP1-201ENST00000265304 PI4KBQ9UBF8 816 aa17.08■□□□□ 0.32
SSBP1-201ENST00000265304 ANAPC4Q9UJX5 808 aa17.08■□□□□ 0.32
SSBP1-201ENST00000265304 SSC5DA1L4H1 1573 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 USP5P45974 858 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 GABPAQ06546 454 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 SUPT20HL1Q3ZLR7 823 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 CTR9Q6PD62 1173 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 HOOK2Q96ED9 719 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 NACAP1Q9BZK3 213 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 LSG1Q9H089 658 aaKnown RBP17.07■□□□□ 0.32
SSBP1-201ENST00000265304 MYH8P13535 1937 aa17.07■□□□□ 0.32
SSBP1-201ENST00000265304 ROBO3Q96MS0 1386 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 UNCXA6NJT0 531 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 USP17L12C9JPN9 530 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 ADM5C9JUS6 153 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 USP17L21D6R901 530 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 FGRP09769 529 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 TCP10Q12799 353 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 MAP3K11Q16584 847 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 NBPF12Q5TAG4 269 aaPredicted RBP17.06■□□□□ 0.32
SSBP1-201ENST00000265304 TTC6Q86TZ1 520 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 CDCA5Q96FF9 252 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 ARPP21Q9UBL0 812 aaPredicted RBP17.06■□□□□ 0.32
SSBP1-201ENST00000265304 ZNF112Q9UJU3 913 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 PALD1Q9ULE6 856 aa17.06■□□□□ 0.32
SSBP1-201ENST00000265304 EIF5BO60841 1220 aaKnown RBP17.05■□□□□ 0.32
SSBP1-201ENST00000265304 FKBP1BP68106 108 aa17.05■□□□□ 0.32
SSBP1-201ENST00000265304 PICALMQ13492 652 aa17.05■□□□□ 0.32
SSBP1-201ENST00000265304 C8orf34Q49A92 452 aa17.05■□□□□ 0.32
SSBP1-201ENST00000265304 CDAN1Q8IWY9 1227 aa17.05■□□□□ 0.32
SSBP1-201ENST00000265304 DDRGK1Q96HY6 314 aa17.05■□□□□ 0.32
SSBP1-201ENST00000265304 MCM9Q9NXL9 1143 aa17.05■□□□□ 0.32
SSBP1-201ENST00000265304 HERC5Q9UII4 1024 aaKnown RBP17.05■□□□□ 0.32
SSBP1-201ENST00000265304 PLCD1P51178 756 aa17.04■□□□□ 0.32
SSBP1-201ENST00000265304 PTH1RQ03431 593 aa17.04■□□□□ 0.32
SSBP1-201ENST00000265304 TRAF5O00463 557 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 NECTIN1Q15223 517 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 CST9Q5W186 159 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 TATDN1Q6P1N9 297 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 DLK2Q6UY11 383 aa17.03■□□□□ 0.32
SSBP1-201ENST00000265304 KCNB2Q92953 911 aa17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 106.6 ms