RNA–Protein interactions for RNA: ENST00000263694.8

SNRNP40-201, Transcript of small nuclear ribonucleoprotein U5 subunit 40, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRNP40, Length 1,597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP40-201ENST00000263694 USP5P45974 858 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 HDLBPQ00341 1268 aaKnown RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 CTDSPL2Q05D32 466 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 PICALMQ13492 652 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 ALX1Q15699 326 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 TMED8Q6PL24 325 aaPredicted RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 OGFOD1Q8N543 542 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 MRIQ9BWK5 157 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 NBPF3Q9H094 633 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 NAPBQ9H115 298 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 TDRD3Q9H7E2 651 aaKnown RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 DCP1AQ9NPI6 582 aaPredicted RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 SAP30BPQ9UHR5 308 aaKnown RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 CNOT7Q9UIV1 285 aaKnown RBP11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 TACC3Q9Y6A5 838 aa11.61□□□□□ -0.55
SNRNP40-201ENST00000263694 MINDY4BA8MYZ0 360 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 USP17L12C9JPN9 530 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 USP17L21D6R901 530 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 WDHD1O75717 1129 aaPredicted RBP11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 NFIAQ12857 509 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 CTR9Q6PD62 1173 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 STOX1Q6ZVD7 989 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 SAMD7Q7Z3H4 446 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 MICALL2Q8IY33 904 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 NKX2-3Q8TAU0 364 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 KCNB2Q92953 911 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 NACAP1Q9BZK3 213 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 DDX4Q9NQI0 724 aaKnown RBP11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 HDAC9Q9UKV0 1011 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 MYH1P12882 1939 aa11.6□□□□□ -0.55
SNRNP40-201ENST00000263694 LAMA4Q16363 1823 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 FOCADQ5VW36 1801 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 NAV1Q8NEY1 1877 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 CLRN2A0PK11 232 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 DLGAP5Q15398 846 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 IMMTQ16891 758 aaKnown RBP11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 NBPF9Q3BBW0 867 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 TBC1D10BQ4KMP7 808 aaPredicted RBP11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 ZFPM1Q8IX07 1006 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 JAKMIP1Q96N16 626 aaKnown RBP11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 UPF3BQ9BZI7 483 aaKnown RBP11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 MYOZ2Q9NPC6 264 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 MCM9Q9NXL9 1143 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 MKRN1Q9UHC7 482 aaKnown RBP11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 CTNNA3Q9UI47 895 aa11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 SCAF8Q9UPN6 1271 aaKnown RBP11.59□□□□□ -0.55
SNRNP40-201ENST00000263694 E7EWF7 191 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 ZNF213O14771 459 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 PLCG2P16885 1265 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 ZKSCAN1P17029 563 aaPredicted RBP11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 RPS12P25398 132 aaKnown RBP11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 EPS15P42566 896 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 ZNF280AP59817 542 aaPredicted RBP11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 TCP10Q12799 353 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 RNF20Q5VTR2 975 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 TBC1D10CQ8IV04 446 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 GPC2Q8N158 579 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 DPF2Q92785 391 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 ATP8A2Q9NTI2 1148 aa11.58□□□□□ -0.55
SNRNP40-201ENST00000263694 FLT1P17948 1338 aa11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 CASTP20810 708 aaKnown RBP11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 ANAPC15P60006 121 aa11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 PPARAQ07869 468 aa11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 ZBED3Q96IU2 234 aaPredicted RBP11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 TCEANC2Q96MN5 208 aa11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 GPRC5DQ9NZD1 345 aa11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 ZNF70Q9UC06 446 aaPredicted RBP11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 FAM198AQ9UFP1 575 aa11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 ASTN2O75129 1339 aaPredicted RBP11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 RPAP1Q9BWH6 1393 aaPredicted RBP11.58□□□□□ -0.56
SNRNP40-201ENST00000263694 TCP10L2B9ZVM9 353 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 WNT10BO00744 389 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 CD2BP2O95400 341 aaKnown RBP11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 SLURP2P0DP57 97 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 PLCD1P51178 756 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 NEK4P51957 841 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 TSGA10IPQ3SY00 556 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 GIMAP6Q6P9H5 292 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 CHST3Q7LGC8 479 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 MTMR14Q8NCE2 650 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 DYNLL2Q96FJ2 89 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 ZMYM6O95789 1325 aa11.57□□□□□ -0.56
SNRNP40-201ENST00000263694 H7C1D1 291 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 POLR3DP05423 398 aaPredicted RBP11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 CD44P16070 742 aaKnown RBP11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 NEDD4P46934 1319 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 C12orf60Q5U649 245 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 CERS3Q8IU89 383 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 TRPM4Q8TD43 1214 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 IL17RAQ96F46 866 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 DDRGK1Q96HY6 314 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 LARP6Q9BRS8 491 aaKnown RBP11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 VEZTQ9HBM0 779 aa11.56□□□□□ -0.56
SNRNP40-201ENST00000263694 LAMB1P07942 1786 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 DDX60LQ5H9U9 1706 aaKnown RBP11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 PRDM1O75626 825 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 HIRAP54198 1017 aaPredicted RBP11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 RABEP1Q15276 862 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 KIF4BQ2VIQ3 1234 aa11.55□□□□□ -0.56
SNRNP40-201ENST00000263694 SBK1Q52WX2 424 aa11.55□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms