RNA–Protein interactions for RNA: ENST00000259254.8

GYPC-201, Transcript of glycophorin C (Gerbich blood group), humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GYPC, Length 1,246 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GYPC-201ENST00000259254 EPB41L4AQ9HCS5 686 aaPredicted RBP18.59■□□□□ 0.57
GYPC-201ENST00000259254 ATP8A2Q9NTI2 1148 aa18.59■□□□□ 0.57
GYPC-201ENST00000259254 TRPM7Q96QT4 1865 aa18.58■□□□□ 0.57
GYPC-201ENST00000259254 MYO1BO43795 1136 aa18.58■□□□□ 0.56
GYPC-201ENST00000259254 FGAP02671 866 aa18.58■□□□□ 0.56
GYPC-201ENST00000259254 ZKSCAN1P17029 563 aaPredicted RBP18.58■□□□□ 0.56
GYPC-201ENST00000259254 HSPA4P34932 840 aa18.58■□□□□ 0.56
GYPC-201ENST00000259254 IMMTQ16891 758 aaKnown RBP18.58■□□□□ 0.56
GYPC-201ENST00000259254 MAP1SQ66K74 1059 aaPredicted RBP18.58■□□□□ 0.56
GYPC-201ENST00000259254 CREB3L3Q68CJ9 461 aa18.58■□□□□ 0.56
GYPC-201ENST00000259254 ADARB2Q9NS39 739 aaKnown RBP18.58■□□□□ 0.56
GYPC-201ENST00000259254 MYH7P12883 1935 aa18.58■□□□□ 0.56
GYPC-201ENST00000259254 ZNF646O15015 1829 aaPredicted RBP18.58■□□□□ 0.56
GYPC-201ENST00000259254 CLRN2A0PK11 232 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 SLC27A2O14975 620 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 CACNB3P54284 484 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 ALX1Q15699 326 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 KIF4BQ2VIQ3 1234 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 GIMAP6Q6P9H5 292 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 SAMD7Q7Z3H4 446 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 AMOTL1Q8IY63 956 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 MTMR14Q8NCE2 650 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 DCP1AQ9NPI6 582 aaPredicted RBP18.57■□□□□ 0.56
GYPC-201ENST00000259254 MCM9Q9NXL9 1143 aa18.57■□□□□ 0.56
GYPC-201ENST00000259254 MINDY4BA8MYZ0 360 aa18.56■□□□□ 0.56
GYPC-201ENST00000259254 ZNF213O14771 459 aa18.56■□□□□ 0.56
GYPC-201ENST00000259254 RBM25P49756 843 aaKnown RBP18.56■□□□□ 0.56
GYPC-201ENST00000259254 HAND2P61296 217 aa18.56■□□□□ 0.56
GYPC-201ENST00000259254 NECTIN1Q15223 517 aa18.56■□□□□ 0.56
GYPC-201ENST00000259254 VEZTQ9HBM0 779 aa18.56■□□□□ 0.56
GYPC-201ENST00000259254 TSHZ2Q9NRE2 1034 aa18.56■□□□□ 0.56
GYPC-201ENST00000259254 SAP30BPQ9UHR5 308 aaKnown RBP18.56■□□□□ 0.56
GYPC-201ENST00000259254 PALD1Q9ULE6 856 aa18.56■□□□□ 0.56
GYPC-201ENST00000259254 ZMYM6O95789 1325 aa18.55■□□□□ 0.56
GYPC-201ENST00000259254 FLT1P17948 1338 aa18.55■□□□□ 0.56
GYPC-201ENST00000259254 WDHD1O75717 1129 aaPredicted RBP18.55■□□□□ 0.56
GYPC-201ENST00000259254 SLC4A8Q2Y0W8 1093 aa18.55■□□□□ 0.56
GYPC-201ENST00000259254 NBPF9Q3BBW0 867 aa18.55■□□□□ 0.56
GYPC-201ENST00000259254 ARPP21Q9UBL0 812 aaPredicted RBP18.55■□□□□ 0.56
GYPC-201ENST00000259254 ZNF70Q9UC06 446 aaPredicted RBP18.55■□□□□ 0.56
GYPC-201ENST00000259254 TMEM88BA6NKF7 163 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 USP17L12C9JPN9 530 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 USP17L21D6R901 530 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 WNT10BO00744 389 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 EGFRP00533 1210 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 POLR3DP05423 398 aaPredicted RBP18.54■□□□□ 0.56
GYPC-201ENST00000259254 CYP21A2P08686 494 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 NFIAQ12857 509 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 SPDYE2Q495Y8 402 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 ZBED3Q96IU2 234 aaPredicted RBP18.54■□□□□ 0.56
GYPC-201ENST00000259254 SNX14Q9Y5W7 946 aa18.54■□□□□ 0.56
GYPC-201ENST00000259254 CYP2D7A0A087X1C5 515 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 TCP10L2B9ZVM9 353 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 CYP2D6P10635 497 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 PPARAQ07869 468 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 TCP10Q12799 353 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 CTR9Q6PD62 1173 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 TRPM4Q8TD43 1214 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 IDI2Q9BXS1 227 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 DDX4Q9NQI0 724 aaKnown RBP18.53■□□□□ 0.56
GYPC-201ENST00000259254 CNTNAP1P78357 1384 aa18.53■□□□□ 0.56
GYPC-201ENST00000259254 ANAPC15P60006 121 aa18.52■□□□□ 0.56
GYPC-201ENST00000259254 ZSCAN29Q8IWY8 852 aaPredicted RBP18.52■□□□□ 0.56
GYPC-201ENST00000259254 RASEFQ8IZ41 740 aa18.52■□□□□ 0.56
GYPC-201ENST00000259254 STK11IPQ8N1F8 1099 aa18.52■□□□□ 0.56
GYPC-201ENST00000259254 OSBPL5Q9H0X9 879 aaPredicted RBP18.52■□□□□ 0.56
GYPC-201ENST00000259254 MKRN1Q9UHC7 482 aaKnown RBP18.52■□□□□ 0.56
GYPC-201ENST00000259254 MYH2Q9UKX2 1941 aa18.52■□□□□ 0.56
GYPC-201ENST00000259254 SLC3A2P08195 630 aaKnown RBP18.51■□□□□ 0.55
GYPC-201ENST00000259254 CTDSPL2Q05D32 466 aa18.51■□□□□ 0.55
GYPC-201ENST00000259254 KRT32Q14532 448 aa18.51■□□□□ 0.55
GYPC-201ENST00000259254 SBK1Q52WX2 424 aa18.51■□□□□ 0.55
GYPC-201ENST00000259254 KCNB2Q92953 911 aa18.51■□□□□ 0.55
GYPC-201ENST00000259254 JAKMIP1Q96N16 626 aaKnown RBP18.51■□□□□ 0.55
GYPC-201ENST00000259254 FAM198AQ9UFP1 575 aa18.51■□□□□ 0.55
GYPC-201ENST00000259254 TAF6LQ9Y6J9 622 aa18.51■□□□□ 0.55
GYPC-201ENST00000259254 ENTPD3O75355 529 aa18.5■□□□□ 0.55
GYPC-201ENST00000259254 HLA-DOAP06340 250 aa18.5■□□□□ 0.55
GYPC-201ENST00000259254 TNNI2P48788 182 aa18.5■□□□□ 0.55
GYPC-201ENST00000259254 TTC6Q86TZ1 520 aa18.5■□□□□ 0.55
GYPC-201ENST00000259254 TBC1D10CQ8IV04 446 aa18.5■□□□□ 0.55
GYPC-201ENST00000259254 TOMM22Q9NS69 142 aa18.5■□□□□ 0.55
GYPC-201ENST00000259254 PGAP2Q9UHJ9 254 aa18.5■□□□□ 0.55
GYPC-201ENST00000259254 ASTN2O75129 1339 aaPredicted RBP18.49■□□□□ 0.55
GYPC-201ENST00000259254 E7EWF7 191 aa18.49■□□□□ 0.55
GYPC-201ENST00000259254 NPM3O75607 178 aaKnown RBP18.49■□□□□ 0.55
GYPC-201ENST00000259254 PSMA5P28066 241 aa18.49■□□□□ 0.55
GYPC-201ENST00000259254 HIRAP54198 1017 aaPredicted RBP18.49■□□□□ 0.55
GYPC-201ENST00000259254 C12orf60Q5U649 245 aa18.49■□□□□ 0.55
GYPC-201ENST00000259254 ANGEL2Q5VTE6 544 aaKnown RBP18.49■□□□□ 0.55
GYPC-201ENST00000259254 ZFPM1Q8IX07 1006 aa18.49■□□□□ 0.55
GYPC-201ENST00000259254 ZC3H15Q8WU90 426 aaKnown RBP18.49■□□□□ 0.55
GYPC-201ENST00000259254 RNF41Q9H4P4 317 aaPredicted RBP18.49■□□□□ 0.55
GYPC-201ENST00000259254 POLR2AP24928 1970 aaKnown RBP18.48■□□□□ 0.55
GYPC-201ENST00000259254 FMR1Q06787 632 aaKnown RBP eCLIP18.48■□□□□ 0.55
GYPC-201ENST00000259254 TRDNQ13061 729 aa18.48■□□□□ 0.55
GYPC-201ENST00000259254 TNFAIP1Q13829 316 aa18.48■□□□□ 0.55
GYPC-201ENST00000259254 FKBP1CQ5VVH2 108 aa18.48■□□□□ 0.55
GYPC-201ENST00000259254 RALYLQ86SE5 291 aaKnown RBP18.48■□□□□ 0.55
GYPC-201ENST00000259254 FAM151AQ8WW52 585 aa18.48■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms