RNA–Protein interactions for RNA: ENST00000257909.7

TROAP-201, Transcript of trophinin associated protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TROAP, Length 2,527 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TROAP-201ENST00000257909 KIF4BQ2VIQ3 1234 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 LONRF3Q496Y0 759 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 MYD88Q99836 296 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 IRX2Q9BZI1 471 aaPredicted RBP13.12□□□□□ -0.31
TROAP-201ENST00000257909 DEF6Q9H4E7 631 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 PHRF1Q9P1Y6 1649 aaKnown RBP13.12□□□□□ -0.31
TROAP-201ENST00000257909 CTAGE15A4D2H0 777 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 RNF113AO15541 343 aaKnown RBP13.12□□□□□ -0.31
TROAP-201ENST00000257909 PPFIA4O75335 1185 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 CPP00450 1065 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 CTAGE8P0CG41 777 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 BMP6P22004 513 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 IMMTQ16891 758 aaKnown RBP13.12□□□□□ -0.31
TROAP-201ENST00000257909 FOXR1Q6PIV2 292 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 CTAGE6Q86UF2 777 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 VPS37DQ86XT2 251 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 CTAGE4Q8IX94 777 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 GNL3Q9BVP2 549 aaKnown RBP eCLIP13.12□□□□□ -0.31
TROAP-201ENST00000257909 FAM107BQ9H098 131 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 VIPAS39Q9H9C1 493 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 GJB4Q9NTQ9 266 aa13.12□□□□□ -0.31
TROAP-201ENST00000257909 WDR19Q8NEZ3 1342 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 SOWAHDA6NJG2 315 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 CDC27P30260 824 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 MTF1Q14872 753 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 ZNF569Q5MCW4 686 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 NT5DC1Q5TFE4 455 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 RASGRP2Q7LDG7 609 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 TRIML1Q8N9V2 468 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 CTCFLQ8NI51 663 aaPredicted RBP13.11□□□□□ -0.31
TROAP-201ENST00000257909 MAP3K14Q99558 947 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 GPHNQ9NQX3 736 aaPredicted RBP13.11□□□□□ -0.31
TROAP-201ENST00000257909 RNF216Q9NWF9 866 aaPredicted RBP13.11□□□□□ -0.31
TROAP-201ENST00000257909 C5P01031 1676 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 SPEF2Q9C093 1822 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 A0A1B0GTH6 734 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 KCNA6P17658 529 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 ATP2B1P20020 1258 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 VSNL1P62760 191 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 MDM2Q00987 491 aaPredicted RBP13.11□□□□□ -0.31
TROAP-201ENST00000257909 HSP90AA4PQ58FG1 418 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 PPFIBP1Q86W92 1011 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 SUGP1Q8IWZ8 645 aaKnown RBP13.11□□□□□ -0.31
TROAP-201ENST00000257909 GPR108Q9NPR9 543 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 MAN1B1Q9UKM7 699 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 TTF2Q9UNY4 1162 aaKnown RBP13.11□□□□□ -0.31
TROAP-201ENST00000257909 EID1Q9Y6B2 187 aa13.11□□□□□ -0.31
TROAP-201ENST00000257909 CDKL5O76039 1030 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 POSTNQ15063 836 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 TTLL5Q6EMB2 1281 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 WDR93Q6P2C0 686 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 MB21D2Q8IYB1 491 aaPredicted RBP13.1□□□□□ -0.31
TROAP-201ENST00000257909 NCOA7Q8NI08 942 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 NCAPGQ9BPX3 1015 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 ALG1Q9BT22 464 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 FAM204AQ9H8W3 233 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 SUGCTQ9HAC7 445 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 MYO1AQ9UBC5 1043 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 C4AP0C0L4 1744 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 C4BP0C0L5 1744 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 RHOXF2BP0C7M4 288 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 DNAJC21Q5F1R6 531 aaKnown RBP13.1□□□□□ -0.31
TROAP-201ENST00000257909 RAD9BQ6WBX8 426 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 LRRC59Q96AG4 307 aaKnown RBP13.1□□□□□ -0.31
TROAP-201ENST00000257909 CLIC6Q96NY7 704 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 MYCBPQ99417 103 aaPredicted RBP13.1□□□□□ -0.31
TROAP-201ENST00000257909 NAPGQ99747 312 aaPredicted RBP13.1□□□□□ -0.31
TROAP-201ENST00000257909 RHOXF2Q9BQY4 288 aa13.1□□□□□ -0.31
TROAP-201ENST00000257909 DDX60Q8IY21 1712 aaKnown RBP13.1□□□□□ -0.31
TROAP-201ENST00000257909 MCM3P25205 808 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 AARSP49588 968 aaKnown RBP eCLIP13.09□□□□□ -0.31
TROAP-201ENST00000257909 FMR1Q06787 632 aaKnown RBP eCLIP13.09□□□□□ -0.31
TROAP-201ENST00000257909 TTC39AQ5SRH9 613 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 RALYLQ86SE5 291 aaKnown RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 AFAP1L1Q8TED9 768 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 NEUROD6Q96NK8 337 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 FER1L4A9Z1Z3 1794 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 A0A087WUV0 522 aaPredicted RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 ERCC5P28715 1186 aaPredicted RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 SARSP49591 514 aaKnown RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 EIF5P55010 431 aaKnown RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 MORC3Q14149 939 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 CT47A1Q5JQC4 288 aaPredicted RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 KRT40Q6A162 431 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 WWC2Q6AWC2 1192 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 CPLX2Q6PUV4 134 aaKnown RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 KRI1Q8N9T8 703 aaKnown RBP13.09□□□□□ -0.31
TROAP-201ENST00000257909 XAGE3Q8WTP9 111 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 ZBTB9Q96C00 473 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 CCDC51Q96ER9 411 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 ZMYM6O95789 1325 aa13.09□□□□□ -0.31
TROAP-201ENST00000257909 M0R2C6 588 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 COPS6Q7L5N1 327 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 C14orf37Q86TY3 774 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 SLC35F6Q8N357 371 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 IGSF22Q8N9C0 903 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 TEX13AQ9BXU3 409 aaPredicted RBP13.08□□□□□ -0.32
TROAP-201ENST00000257909 RGPD5Q99666 1765 aa13.08□□□□□ -0.32
TROAP-201ENST00000257909 LRRIQ3A6PVS8 624 aaPredicted RBP13.08□□□□□ -0.32
TROAP-201ENST00000257909 RNF40O75150 1001 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 66.7 ms