RNA–Protein interactions for RNA: ENST00000236671.6

CTSD-201, Transcript of cathepsin D, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CTSD, Length 2,123 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-201ENST00000236671 ZBTB1Q9Y2K1 713 aa17.97■□□□□ 0.47
CTSD-201ENST00000236671 RIPOR2Q9Y4F9 1068 aa17.97■□□□□ 0.47
CTSD-201ENST00000236671 CYP19A1P11511 503 aaPredicted RBP17.96■□□□□ 0.47
CTSD-201ENST00000236671 MARCKSP29966 332 aaPredicted RBP17.96■□□□□ 0.47
CTSD-201ENST00000236671 CRKLP46109 303 aaKnown RBP17.96■□□□□ 0.47
CTSD-201ENST00000236671 TIGD1Q96MW7 591 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 ALG1Q9BT22 464 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 GTPBP4Q9BZE4 634 aaKnown RBP17.96■□□□□ 0.47
CTSD-201ENST00000236671 OGFRQ9NZT2 677 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 KIF2AO00139 706 aaPredicted RBP17.96■□□□□ 0.47
CTSD-201ENST00000236671 TPM4P67936 248 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 METTL24Q5JXM2 366 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 KIF6Q6ZMV9 814 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 VPS37DQ86XT2 251 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 ZNF512BQ96KM6 892 aaPredicted RBP17.96■□□□□ 0.47
CTSD-201ENST00000236671 HPSEQ9Y251 543 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 UBR3Q6ZT12 1888 aa17.96■□□□□ 0.47
CTSD-201ENST00000236671 ECM29Q5VYK3 1845 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 PSDA5PKW4 1024 aaPredicted RBP17.95■□□□□ 0.46
CTSD-201ENST00000236671 IKBKBO14920 756 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 METAP2P50579 478 aaKnown RBP eCLIP17.95■□□□□ 0.465e-7■■□□□ 12.4
CTSD-201ENST00000236671 TRDNQ13061 729 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 SYNE4Q8N205 404 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 KIF18AQ8NI77 898 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 HSD3B7Q9H2F3 369 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 TUBE1Q9UJT0 475 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 CDHR2Q9BYE9 1310 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 KCNJ6P48051 423 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 PTPAQ15257 358 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 SLC9C2Q5TAH2 1124 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 INTS5Q6P9B9 1019 aaKnown RBP17.95■□□□□ 0.46
CTSD-201ENST00000236671 PPP1R13BQ96KQ4 1090 aa17.95■□□□□ 0.46
CTSD-201ENST00000236671 PIH1D3Q9NQM4 214 aaKnown RBP17.95■□□□□ 0.46
CTSD-201ENST00000236671 DDX41Q9UJV9 622 aaKnown RBP17.95■□□□□ 0.46
CTSD-201ENST00000236671 GNPATO15228 680 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 PPP6R2O75170 966 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 CDKL5O76039 1030 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 SFPQP23246 707 aaKnown RBP eCLIP17.94■□□□□ 0.46
CTSD-201ENST00000236671 CDC27P30260 824 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 SLC27A3Q5K4L6 730 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 KRT40Q6A162 431 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 APOA5Q6Q788 366 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 SHC4Q6S5L8 630 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 VGLL2Q8N8G2 317 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 ERO1AQ96HE7 468 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 GREM2Q9H772 168 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 SENP2Q9HC62 589 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 ZNF831Q5JPB2 1677 aa17.94■□□□□ 0.46
CTSD-201ENST00000236671 FAM237AA0A1B0GTK4 181 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 RXRAP19793 462 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 ITGA6P23229 1130 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 SYKP43405 635 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 UBE3CQ15386 1083 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 LDHAL6AQ6ZMR3 332 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 TTLL11Q8NHH1 800 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 MAP3K14Q99558 947 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 LMOD1P29536 600 aaPredicted RBP17.93■□□□□ 0.46
CTSD-201ENST00000236671 FANCCQ00597 558 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 DHX8Q14562 1220 aaKnown RBP17.93■□□□□ 0.46
CTSD-201ENST00000236671 ZNF397Q8NF99 534 aaPredicted RBP17.93■□□□□ 0.46
CTSD-201ENST00000236671 PHKBQ93100 1093 aa17.93■□□□□ 0.46
CTSD-201ENST00000236671 ATP1A3P13637 1013 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 TTF1Q15361 905 aaPredicted RBP17.92■□□□□ 0.46
CTSD-201ENST00000236671 ISM2Q6H9L7 571 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 NOL12Q9UGY1 213 aaKnown RBP eCLIP17.92■□□□□ 0.466e-8■□□□□ 10.2
CTSD-201ENST00000236671 V9GYY5 206 aaPredicted RBP17.92■□□□□ 0.46
CTSD-201ENST00000236671 MAP3K15Q6ZN16 1313 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 CICQ96RK0 1608 aaPredicted RBP17.92■□□□□ 0.46
CTSD-201ENST00000236671 SLU7O95391 586 aaKnown RBP17.92■□□□□ 0.46
CTSD-201ENST00000236671 R3HDM1Q15032 1099 aaKnown RBP17.92■□□□□ 0.46
CTSD-201ENST00000236671 NTRK3Q16288 839 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 KMT5BQ4FZB7 885 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 RESP18Q5W5W9 173 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 GIGYF2Q6Y7W6 1299 aaKnown RBP17.92■□□□□ 0.46
CTSD-201ENST00000236671 NLRP10Q86W26 655 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 JMYQ8N9B5 988 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 L2HGDHQ9H9P8 463 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 ZNF532Q9HCE3 1301 aa17.92■□□□□ 0.46
CTSD-201ENST00000236671 MYO5AQ9Y4I1 1855 aaKnown RBP17.92■□□□□ 0.46
CTSD-201ENST00000236671 B4E1Z4 1266 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 RANBP6O60518 1105 aaKnown RBP17.91■□□□□ 0.46
CTSD-201ENST00000236671 IDH1O75874 414 aaKnown RBP17.91■□□□□ 0.46
CTSD-201ENST00000236671 CTSWP56202 376 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 HLFQ16534 295 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 MICU3Q86XE3 530 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 IGDCC4Q8TDY8 1250 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 AKT1S1Q96B36 256 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 TMEM87BQ96K49 555 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 TFCP2L1Q9NZI6 479 aa17.91■□□□□ 0.46
CTSD-201ENST00000236671 TCRBV5S4A2TA0A5A2 114 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 APPP05067 770 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 PDE6AP16499 860 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 GPTP24298 496 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 ELF2Q15723 593 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 CPLX2Q6PUV4 134 aaKnown RBP17.9■□□□□ 0.46
CTSD-201ENST00000236671 TEX13AQ9BXU3 409 aaPredicted RBP17.9■□□□□ 0.46
CTSD-201ENST00000236671 LY9Q9HBG7 655 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 CNNM1Q9NRU3 951 aa17.9■□□□□ 0.46
CTSD-201ENST00000236671 FAM217BQ9NTX9 383 aaPredicted RBP17.9■□□□□ 0.46
CTSD-201ENST00000236671 ZHX1Q9UKY1 873 aaPredicted RBP17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms