RNA–Protein interactions for RNA: ENST00000229304.4

APOBEC1-201, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOBEC1, Length 879 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-201ENST00000229304 NAA16Q6N069 864 aaPredicted RBP11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 RALYLQ86SE5 291 aaKnown RBP11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 LCORLQ8N3X6 602 aa11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 BRF1Q92994 677 aa11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 NSUN4Q96CB9 384 aaKnown RBP11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 LARP6Q9BRS8 491 aaKnown RBP11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 MTA3Q9BTC8 594 aa11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 NAPBQ9H115 298 aa11.26□□□□□ -0.61
APOBEC1-201ENST00000229304 STX6O43752 255 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 UFL1O94874 794 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 SYT1P21579 422 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 GJB2P29033 226 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 HAND2P61296 217 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 FGD1P98174 961 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 EZH2Q15910 746 aaKnown RBP11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 TBC1D10CQ8IV04 446 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 NECAB1Q8N987 351 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 SMARCC2Q8TAQ2 1214 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 TBC1D16Q8TBP0 767 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 ZNF384Q8TF68 577 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 MASTLQ96GX5 879 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 NBPF3Q9H094 633 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 CNNM2Q9H8M5 875 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 ANO8Q9HCE9 1232 aaPredicted RBP11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 ANAPC4Q9UJX5 808 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 NSFL1CQ9UNZ2 370 aaKnown RBP11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 SLC4A4Q9Y6R1 1079 aa11.25□□□□□ -0.61
APOBEC1-201ENST00000229304 PRC1O43663 620 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 PRKAB2O43741 272 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 TRAK2O60296 914 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 TBC1D12O60347 775 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 ZSCAN22P10073 491 aaPredicted RBP11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 PCP11498 1178 aaKnown RBP11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 NT5C2P49902 561 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 ANTXR2P58335 489 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 GSTO1P78417 241 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 MECOMQ03112 1051 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 EN1Q05925 392 aaPredicted RBP11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 STYK1Q6J9G0 422 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 ADGRA1Q86SQ6 560 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 CERS3Q8IU89 383 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 STAG1Q8WVM7 1258 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 TMEM87BQ96K49 555 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 RNF41Q9H4P4 317 aaPredicted RBP11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 CD209Q9NNX6 404 aa11.24□□□□□ -0.61
APOBEC1-201ENST00000229304 TNS1Q9HBL0 1735 aaKnown RBP11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 NRXN2Q9P2S2 1712 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 DOCK2Q92608 1830 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 PDIA3P30101 505 aaKnown RBP11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 BAG6P46379 1132 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 TDO2P48775 406 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 PPP4CP60510 307 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 HMGN5P82970 282 aaKnown RBP11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 SCRN1Q12765 414 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 CHAF1AQ13111 956 aaPredicted RBP11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 AKNAD1Q5T1N1 836 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 POTEEQ6S8J3 1075 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 MIGA1Q8NAN2 632 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 RGS22Q8NE09 1264 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 TBC1D22AQ8WUA7 517 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 KRT23Q9C075 422 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 POLLQ9UGP5 575 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 MTMR6Q9Y217 621 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 ATP6V1DQ9Y5K8 247 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 FAM205AQ6ZU69 1335 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 A0A1B0GUL6 1792 aa11.23□□□□□ -0.61
APOBEC1-201ENST00000229304 SH2B2O14492 632 aaPredicted RBP11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 LDHBP07195 334 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 LDHCP07864 332 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 FGRP09769 529 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 PRDX5P30044 214 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 LIFRP42702 1097 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 PPARAQ07869 468 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 APOBRQ0VD83 1088 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 SF3B2Q13435 895 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 SGMS1Q86VZ5 419 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 LRRC2Q9BYS8 371 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 CRNKL1Q9BZJ0 848 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 COA1Q9GZY4 146 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 TMX4Q9H1E5 349 aaPredicted RBP11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 ATP8A2Q9NTI2 1148 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 ANGEL1Q9UNK9 670 aaKnown RBP11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 SUGT1Q9Y2Z0 365 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 KIF3AQ9Y496 699 aa11.22□□□□□ -0.61
APOBEC1-201ENST00000229304 DUOX1Q9NRD9 1551 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 DHX16O60231 1041 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 F13A1P00488 732 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 DYNLL1P63167 89 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 SBK1Q52WX2 424 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 LARP1BQ659C4 914 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 MCTP1Q6DN14 999 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 MFSD6Q6ZSS7 791 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 CYB5R4Q7L1T6 521 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 SLC51AQ86UW1 340 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 DZIP1Q86YF9 867 aaKnown RBP11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 MPNDQ8N594 471 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 IGDCC4Q8TDY8 1250 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 LMBRD1Q9NUN5 540 aa11.21□□□□□ -0.61
APOBEC1-201ENST00000229304 NEDD4P46934 1319 aa11.2□□□□□ -0.62
APOBEC1-201ENST00000229304 B4E1Z4 1266 aa11.2□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms