RNA–Protein interactions for RNA: ENST00000217109.8

CSTF1-201, Transcript of cleavage stimulation factor subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSTF1, Length 4,290 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-201ENST00000217109 EXOSC10Q01780 885 aaKnown RBP11.15□□□□□ -0.62
CSTF1-201ENST00000217109 UBE3CQ15386 1083 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 CCDC144BQ3MJ40 725 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 KANK3Q6NY19 840 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 KCNB2Q92953 911 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 KCNF1Q9H3M0 494 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 FBXO3Q9UK99 471 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 MAPK8IP1Q9UQF2 711 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 POLR3GO15318 223 aaPredicted RBP11.15□□□□□ -0.62
CSTF1-201ENST00000217109 AP5Z1O43299 807 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 DEXIO95424 95 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 EIF5P55010 431 aaKnown RBP11.15□□□□□ -0.62
CSTF1-201ENST00000217109 GOLGA8FQ08AF8 430 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 GOLGA8DPQ0D2H9 430 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 RRAGBQ5VZM2 374 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 CCDC12Q8WUD4 166 aaPredicted RBP11.15□□□□□ -0.62
CSTF1-201ENST00000217109 SETDB2Q96T68 719 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 C3P01024 1663 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 CUTAO60888 179 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 CTDNEP1O95476 244 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 SLC39A14Q15043 492 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 MEX3CQ5U5Q3 659 aaKnown RBP11.15□□□□□ -0.62
CSTF1-201ENST00000217109 TBC1D10CQ8IV04 446 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 CAGE1Q8TC20 777 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 FANCLQ9NW38 375 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 PCDHA5Q9Y5H7 936 aa11.15□□□□□ -0.62
CSTF1-201ENST00000217109 UBA7P41226 1012 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 IKQ13123 557 aaPredicted RBP11.15□□□□□ -0.63
CSTF1-201ENST00000217109 ELF2Q15723 593 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 NOSTRINQ8IVI9 506 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 ZNF654Q8IZM8 581 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 ISCA1Q9BUE6 129 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 ZHX3Q9H4I2 956 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 LZTFL1Q9NQ48 299 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 POLR3EQ9NVU0 708 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 AATFQ9NY61 560 aaKnown RBP eCLIP11.15□□□□□ -0.63
CSTF1-201ENST00000217109 SERTAD1Q9UHV2 236 aa11.15□□□□□ -0.63
CSTF1-201ENST00000217109 ZNF215Q9UL58 517 aaPredicted RBP11.15□□□□□ -0.63
CSTF1-201ENST00000217109 KNDC1Q76NI1 1749 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 A0A1W2PQ27 194 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 A0A1W2PQ64 194 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 A0A1W2PQD8 194 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 RASGRF1Q13972 1273 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 CYB5R4Q7L1T6 521 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 ALDH8A1Q9H2A2 487 aaPredicted RBP11.14□□□□□ -0.63
CSTF1-201ENST00000217109 ATP1A3P13637 1013 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 KRT2P35908 639 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 NR5A1Q13285 461 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 FAM47AQ5JRC9 791 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 TRIM34Q9BYJ4 488 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 DENND2AQ9ULE3 1009 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 ZNF335Q9H4Z2 1342 aaPredicted RBP11.14□□□□□ -0.63
CSTF1-201ENST00000217109 PEAK1Q9H792 1746 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 KIF5CO60282 957 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 FANCBQ8NB91 859 aa11.14□□□□□ -0.63
CSTF1-201ENST00000217109 ZNHIT6Q9NWK9 470 aaKnown RBP11.14□□□□□ -0.63
CSTF1-201ENST00000217109 USP17L12C9JPN9 530 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 USP17L21D6R901 530 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 KIF5BP33176 963 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 NAA30Q147X3 362 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-201ENST00000217109 CLSTN1O94985 981 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 CCT6AP40227 531 aaKnown RBP11.13□□□□□ -0.63
CSTF1-201ENST00000217109 CHRNDQ07001 517 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 PPARAQ07869 468 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 POSTNQ15063 836 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 SKIDA1Q1XH10 827 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 HEATR3Q7Z4Q2 680 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 GRAMD1CQ8IYS0 662 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 LCORLQ8N3X6 602 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 MON2Q7Z3U7 1717 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 PARP10Q53GL7 1025 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 PIK3AP1Q6ZUJ8 805 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 MB21D2Q8IYB1 491 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-201ENST00000217109 STRBPQ96SI9 672 aaKnown RBP11.13□□□□□ -0.63
CSTF1-201ENST00000217109 TNKSO95271 1327 aa11.13□□□□□ -0.63
CSTF1-201ENST00000217109 KDM6AO15550 1401 aaPredicted RBP11.13□□□□□ -0.63
CSTF1-201ENST00000217109 SH2B2O14492 632 aaPredicted RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 ADKP55263 362 aaKnown RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 HSP90B2PQ58FF3 399 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 SUSD4Q5VX71 490 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 BAG1Q99933 345 aaPredicted RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 TANGO6Q9C0B7 1094 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 MEGF6O75095 1541 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 CYP2D7A0A087X1C5 515 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 CDC27P30260 824 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 FMR1NBQ8N0W7 255 aaPredicted RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 FUCA2Q9BTY2 467 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 KIF28PB7ZC32 967 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 TSPY3P0CV98 308 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 TSPY8P0CW00 308 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 FDPSP14324 419 aaKnown RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 CRKLP46109 303 aaKnown RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 RNF216Q9NWF9 866 aaPredicted RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 C6orf229H3BNL8 230 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 RBM6P78332 1123 aaKnown RBP11.12□□□□□ -0.63
CSTF1-201ENST00000217109 NRXN3Q9Y4C0 1643 aa11.12□□□□□ -0.63
CSTF1-201ENST00000217109 LOC102724428A0A0B4J2F2 783 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 COBLO75128 1261 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 SIK1P57059 783 aa11.11□□□□□ -0.63
CSTF1-201ENST00000217109 LONRF3Q496Y0 759 aa11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 14.2 ms