RNA–Protein interactions for RNA: ENST00000216727.8

PABPN1-201, Transcript of poly(A) binding protein nuclear 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene PABPN1, Length 2,001 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPN1-201ENST00000216727 FAM217BQ9NTX9 383 aaPredicted RBP34.65■■■■□ 3.14
PABPN1-201ENST00000216727 ZNF772Q68DY9 489 aaPredicted RBP34.64■■■■□ 3.14
PABPN1-201ENST00000216727 SYNE3Q6ZMZ3 975 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 ESR2Q92731 530 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 KIAA1551Q9HCM1 1747 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 ERICH2A1L162 156 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 KLRG2A4D1S0 409 aaPredicted RBP34.64■■■■□ 3.14
PABPN1-201ENST00000216727 BBOX1O75936 387 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 FGRP09769 529 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 LIG1P18858 919 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 WTAPQ15007 396 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 ZNF804AQ7Z570 1209 aa34.64■■■■□ 3.14
PABPN1-201ENST00000216727 CRNKL1Q9BZJ0 848 aaKnown RBP34.63■■■■□ 3.13
PABPN1-201ENST00000216727 PLSCR1O15162 318 aa34.62■■■■□ 3.13
PABPN1-201ENST00000216727 RXRAP19793 462 aa34.62■■■■□ 3.13
PABPN1-201ENST00000216727 USP28Q96RU2 1077 aa34.62■■■■□ 3.13
PABPN1-201ENST00000216727 GPSM2P81274 684 aa34.62■■■■□ 3.13
PABPN1-201ENST00000216727 BRAPQ7Z569 592 aa34.62■■■■□ 3.13
PABPN1-201ENST00000216727 ATP8A2Q9NTI2 1148 aa34.62■■■■□ 3.13
PABPN1-201ENST00000216727 ATP2B4P23634 1241 aa34.61■■■■□ 3.13
PABPN1-201ENST00000216727 CTR9Q6PD62 1173 aa34.61■■■■□ 3.13
PABPN1-201ENST00000216727 SLC51AQ86UW1 340 aa34.61■■■■□ 3.13
PABPN1-201ENST00000216727 FUCA2Q9BTY2 467 aa34.61■■■■□ 3.13
PABPN1-201ENST00000216727 DDX19AQ9NUU7 478 aaKnown RBP34.61■■■■□ 3.13
PABPN1-201ENST00000216727 AATFQ9NY61 560 aaKnown RBP eCLIP34.61■■■■□ 3.13
PABPN1-201ENST00000216727 STK36Q9NRP7 1315 aa34.61■■■■□ 3.13
PABPN1-201ENST00000216727 BAZ2AQ9UIF9 1905 aaKnown RBP34.6■■■■□ 3.13
PABPN1-201ENST00000216727 OTUD7BQ6GQQ9 843 aa34.6■■■■□ 3.13
PABPN1-201ENST00000216727 CRAMP1Q96RY5 1269 aa34.6■■■■□ 3.13
PABPN1-201ENST00000216727 DUOX1Q9NRD9 1551 aa34.6■■■■□ 3.13
PABPN1-201ENST00000216727 DZIP1Q86YF9 867 aaKnown RBP34.6■■■■□ 3.13
PABPN1-201ENST00000216727 FAM43AQ8N2R8 423 aa34.6■■■■□ 3.13
PABPN1-201ENST00000216727 UBAC1Q9BSL1 405 aa34.6■■■■□ 3.13
PABPN1-201ENST00000216727 IARSP41252 1262 aaKnown RBP34.59■■■■□ 3.13
PABPN1-201ENST00000216727 ALG1Q9BT22 464 aa34.59■■■■□ 3.13
PABPN1-201ENST00000216727 MYL10Q9BUA6 226 aa34.59■■■■□ 3.13
PABPN1-201ENST00000216727 NUP62CLQ9H1M0 184 aa34.59■■■■□ 3.13
PABPN1-201ENST00000216727 ZKSCAN3Q9BRR0 538 aa34.59■■■■□ 3.13
PABPN1-201ENST00000216727 DCP1AQ9NPI6 582 aaPredicted RBP34.59■■■■□ 3.13
PABPN1-201ENST00000216727 DACT1Q9NYF0 836 aa34.59■■■■□ 3.13
PABPN1-201ENST00000216727 PODXL2Q9NZ53 605 aa34.59■■■■□ 3.13
PABPN1-201ENST00000216727 IFNAR1P17181 557 aa34.58■■■■□ 3.13
PABPN1-201ENST00000216727 CCDC144CPQ8IYA2 1237 aa34.58■■■■□ 3.13
PABPN1-201ENST00000216727 RNF214Q8ND24 703 aa34.58■■■■□ 3.13
PABPN1-201ENST00000216727 RTEL1Q9NZ71 1219 aa34.58■■■■□ 3.13
PABPN1-201ENST00000216727 LDHBP07195 334 aaKnown RBP34.57■■■■□ 3.13
PABPN1-201ENST00000216727 SEC23AQ15436 765 aa34.57■■■■□ 3.13
PABPN1-201ENST00000216727 STK11IPQ8N1F8 1099 aa34.57■■■■□ 3.13
PABPN1-201ENST00000216727 BICD2Q8TD16 824 aa34.57■■■■□ 3.13
PABPN1-201ENST00000216727 PDLIM2Q96JY6 352 aa34.57■■■■□ 3.13
PABPN1-201ENST00000216727 USP17L12C9JPN9 530 aa34.57■■■■□ 3.12
PABPN1-201ENST00000216727 USP17L21D6R901 530 aa34.57■■■■□ 3.12
PABPN1-201ENST00000216727 RANBP6O60518 1105 aaKnown RBP34.57■■■■□ 3.12
PABPN1-201ENST00000216727 KIF23Q02241 960 aaPredicted RBP34.57■■■■□ 3.12
PABPN1-201ENST00000216727 CEBPZQ03701 1054 aaKnown RBP34.57■■■■□ 3.12
PABPN1-201ENST00000216727 PHKBQ93100 1093 aa34.57■■■■□ 3.12
PABPN1-201ENST00000216727 GGA1Q9UJY5 639 aa34.57■■■■□ 3.12
PABPN1-201ENST00000216727 SBK1Q52WX2 424 aa34.56■■■■□ 3.12
PABPN1-201ENST00000216727 TMC4Q7Z404 712 aa34.56■■■■□ 3.12
PABPN1-201ENST00000216727 FTOQ9C0B1 505 aaKnown RBP eCLIP34.56■■■■□ 3.122e-10■■□□□ 12.9
PABPN1-201ENST00000216727 JAG2Q9Y219 1238 aa34.56■■■■□ 3.12
PABPN1-201ENST00000216727 CCDC196A0A1B0GTZ2 297 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 UFL1O94874 794 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 UVSSAQ2YD98 709 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 AKT1S1Q96B36 256 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 ARPP21Q9UBL0 812 aaPredicted RBP34.55■■■■□ 3.12
PABPN1-201ENST00000216727 CYP2D7A0A087X1C5 515 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 FMNL1O95466 1100 aaPredicted RBP34.55■■■■□ 3.12
PABPN1-201ENST00000216727 MAP3K11Q16584 847 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 RTN1Q16799 776 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 TRIM44Q96DX7 344 aaPredicted RBP34.55■■■■□ 3.12
PABPN1-201ENST00000216727 GJB4Q9NTQ9 266 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 TNKSO95271 1327 aa34.55■■■■□ 3.12
PABPN1-201ENST00000216727 SMIM22K7EJ46 135 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 GSTO1P78417 241 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 SSRP1Q08945 709 aaKnown RBP34.54■■■■□ 3.12
PABPN1-201ENST00000216727 PPP2R5BQ15173 497 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 NLGN1Q8N2Q7 840 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 DDX52Q9Y2R4 599 aaKnown RBP eCLIP34.54■■■■□ 3.12
PABPN1-201ENST00000216727 ORC4O43929 436 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 ZNF827Q17R98 1081 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 MYSM1Q5VVJ2 828 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 RBM43Q6ZSC3 357 aaKnown RBP34.54■■■■□ 3.12
PABPN1-201ENST00000216727 ZNF654Q8IZM8 581 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 CLSTN2Q9H4D0 955 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 POLR3EQ9NVU0 708 aa34.54■■■■□ 3.12
PABPN1-201ENST00000216727 LAMB1P07942 1786 aa34.53■■■■□ 3.12
PABPN1-201ENST00000216727 IL1R1P14778 569 aa34.53■■■■□ 3.12
PABPN1-201ENST00000216727 WASF1Q92558 559 aa34.53■■■■□ 3.12
PABPN1-201ENST00000216727 ZSCAN10Q96SZ4 725 aaPredicted RBP34.53■■■■□ 3.12
PABPN1-201ENST00000216727 CD209Q9NNX6 404 aa34.53■■■■□ 3.12
PABPN1-201ENST00000216727 KRT40Q6A162 431 aa34.52■■■■□ 3.12
PABPN1-201ENST00000216727 AIFM3Q96NN9 605 aa34.52■■■■□ 3.12
PABPN1-201ENST00000216727 ECM29Q5VYK3 1845 aa34.52■■■■□ 3.12
PABPN1-201ENST00000216727 NR1I2O75469 434 aa34.52■■■■□ 3.12
PABPN1-201ENST00000216727 TNMDQ9H2S6 317 aa34.52■■■■□ 3.12
PABPN1-201ENST00000216727 KIF28PB7ZC32 967 aa34.51■■■■□ 3.12
PABPN1-201ENST00000216727 YEATS4O95619 227 aa34.51■■■■□ 3.12
PABPN1-201ENST00000216727 SLC3A2P08195 630 aaKnown RBP34.51■■■■□ 3.12
PABPN1-201ENST00000216727 CCDC192P0DO97 292 aa34.51■■■■□ 3.12
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms