RNA–Protein interactions for RNA: ENST00000035307.6

CHPF2-201, Transcript of chondroitin polymerizing factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHPF2, Length 3,978 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHPF2-201ENST00000035307 STX17P56962 302 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 STX1AQ16623 288 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 TXNRD3Q86VQ6 643 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 PPFIBP1Q86W92 1011 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 PDCL2Q8N4E4 241 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 ESR2Q92731 530 aa13.88□□□□□ -0.19
CHPF2-201ENST00000035307 FAM196BA6NMK8 535 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 PPIP5K2O43314 1243 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 CYP2D6P10635 497 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 TXLNAP40222 546 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 NLRP5P59047 1200 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 PDE4BQ07343 736 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 ZMYM1Q5SVZ6 1142 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 MRPS27Q92552 414 aaKnown RBP13.87□□□□□ -0.19
CHPF2-201ENST00000035307 TMOD2Q9NZR1 351 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 XRN1Q8IZH2 1706 aaKnown RBP13.87□□□□□ -0.19
CHPF2-201ENST00000035307 COL9A3Q14050 684 aaPredicted RBP13.87□□□□□ -0.19
CHPF2-201ENST00000035307 SPTY2D1Q68D10 685 aaPredicted RBP13.87□□□□□ -0.19
CHPF2-201ENST00000035307 LEO1Q8WVC0 666 aaPredicted RBP13.87□□□□□ -0.19
CHPF2-201ENST00000035307 CDK5RAP3Q96JB5 506 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 RNF41Q9H4P4 317 aaPredicted RBP13.87□□□□□ -0.19
CHPF2-201ENST00000035307 SPTLC2O15270 562 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 ZNF445P59923 1031 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 FILIP1LQ4L180 1135 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 NLGN1Q8N2Q7 840 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 DYNLL2Q96FJ2 89 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 AIFM3Q96NN9 605 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 PLIN2Q99541 437 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 ZSCAN16Q9H4T2 348 aaPredicted RBP13.87□□□□□ -0.19
CHPF2-201ENST00000035307 KAT14Q9H8E8 782 aa13.87□□□□□ -0.19
CHPF2-201ENST00000035307 SPATA31A6Q5VVP1 1343 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 NTSR2O95665 410 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 RTN1Q16799 776 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 KCNJ14Q9UNX9 436 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 BAZ2BQ9UIF8 2168 aaKnown RBP13.86□□□□□ -0.19
CHPF2-201ENST00000035307 DLG5Q8TDM6 1919 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 CIAO1O76071 339 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 USP17L8P0C7I0 530 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 GOLGA8HP0CJ92 632 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 DNA2P51530 1060 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 NOL7Q9UMY1 257 aaKnown RBP13.86□□□□□ -0.19
CHPF2-201ENST00000035307 SKILP12757 684 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 PTPN21Q16825 1174 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 PRR5LQ6MZQ0 368 aa13.86□□□□□ -0.19
CHPF2-201ENST00000035307 CLRN2A0PK11 232 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 NR1I2O75469 434 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 TOP1P11387 765 aaKnown RBP13.85□□□□□ -0.19
CHPF2-201ENST00000035307 FSD2A1L4K1 749 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 SLC44A5Q8NCS7 719 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 TANGO6Q9C0B7 1094 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 LTN1O94822 1766 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 AMIGO3Q86WK7 504 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 GPIHBP1Q8IV16 184 aa13.85□□□□□ -0.19
CHPF2-201ENST00000035307 RNF216Q9NWF9 866 aaPredicted RBP13.85□□□□□ -0.19
CHPF2-201ENST00000035307 BCL9O00512 1426 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 ADD2P35612 726 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 SOGA3Q5TF21 947 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 OGFOD1Q8N543 542 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 STAMQ92783 540 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 ZDHHC9Q9Y397 364 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 KRT18P05783 430 aaKnown RBP13.84□□□□□ -0.19
CHPF2-201ENST00000035307 LRMPQ12912 555 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 TRIM28Q13263 835 aaKnown RBP13.84□□□□□ -0.19
CHPF2-201ENST00000035307 CLEC4GQ6UXB4 293 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 CPVLQ9H3G5 476 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 RRP9O43818 475 aaKnown RBP13.84□□□□□ -0.19
CHPF2-201ENST00000035307 TFAP4Q01664 338 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 HEATR3Q7Z4Q2 680 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 CAGE1Q8TC20 777 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 GPCPD1Q9NPB8 672 aa13.84□□□□□ -0.19
CHPF2-201ENST00000035307 V9GY48 417 aaPredicted RBP13.84□□□□□ -0.19
CHPF2-201ENST00000035307 OFD1O75665 1012 aa13.83□□□□□ -0.19
CHPF2-201ENST00000035307 MECOMQ03112 1051 aa13.83□□□□□ -0.19
CHPF2-201ENST00000035307 NECTIN1Q15223 517 aa13.83□□□□□ -0.19
CHPF2-201ENST00000035307 GOLGA6L1Q8N7Z2 621 aa13.83□□□□□ -0.19
CHPF2-201ENST00000035307 DHX58Q96C10 678 aa13.83□□□□□ -0.19
CHPF2-201ENST00000035307 IFNKQ9P0W0 207 aa13.83□□□□□ -0.19
CHPF2-201ENST00000035307 SETD1AO15047 1707 aaKnown RBP13.83□□□□□ -0.2
CHPF2-201ENST00000035307 SMTNL1A8MU46 457 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 PPEF1O14829 653 aaPredicted RBP13.83□□□□□ -0.2
CHPF2-201ENST00000035307 FAM84BQ96KN1 310 aaPredicted RBP13.83□□□□□ -0.2
CHPF2-201ENST00000035307 USP28Q96RU2 1077 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 CBX8Q9HC52 389 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 AKAP12Q02952 1782 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 ERICH4A6NGS2 130 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 POLD1P28340 1107 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 CASP7P55210 303 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 WASF1Q92558 559 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 ZSWIM6Q9HCJ5 1215 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 RGPD2P0DJD1 1756 aa13.83□□□□□ -0.2
CHPF2-201ENST00000035307 NMT2O60551 498 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 UBE4AQ14139 1066 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 FEZ1Q99689 392 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 ANGEL1Q9UNK9 670 aaKnown RBP13.82□□□□□ -0.2
CHPF2-201ENST00000035307 KNDC1Q76NI1 1749 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 CCDC196A0A1B0GTZ2 297 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 SMIM22K7EJ46 135 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 BTDP43251 543 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 PPARAQ07869 468 aa13.82□□□□□ -0.2
CHPF2-201ENST00000035307 STOX1Q6ZVD7 989 aa13.82□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms