RNA–Protein interactions for RNA: ENST00000011653.8

CD4-201, Transcript of CD4 molecule, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CD4, Length 3,114 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-201ENST00000011653 USP17L1Q7RTZ2 530 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 TMEM63CQ9P1W3 806 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 GSG1L2A8MUP6 293 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 NFKBIEO00221 500 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 C15orf52Q6ZUT6 534 aaKnown RBP12.42□□□□□ -0.42
CD4-201ENST00000011653 DSCC1Q9BVC3 393 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 EPB41L2O43491 1005 aaKnown RBP12.42□□□□□ -0.42
CD4-201ENST00000011653 RRP9O43818 475 aaKnown RBP12.42□□□□□ -0.42
CD4-201ENST00000011653 CYP2D6P10635 497 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 IARSP41252 1262 aaKnown RBP12.42□□□□□ -0.42
CD4-201ENST00000011653 TCP10Q12799 353 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 PDLIM2Q96JY6 352 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 NACAP1Q9BZK3 213 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 MCM9Q9NXL9 1143 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 CYP46A1Q9Y6A2 500 aa12.42□□□□□ -0.42
CD4-201ENST00000011653 A0A1B0GUL6 1792 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 SYCE3A1L190 88 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 PATL2C9JE40 543 aaKnown RBP12.41□□□□□ -0.42
CD4-201ENST00000011653 USP17L12C9JPN9 530 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 USP17L21D6R901 530 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 PSMD14O00487 310 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 HSP90AA2PQ14568 343 aaPredicted RBP12.41□□□□□ -0.42
CD4-201ENST00000011653 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.41□□□□□ -0.42
CD4-201ENST00000011653 TBC1D22AQ8WUA7 517 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 NEK1Q96PY6 1258 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 RIOK1Q9BRS2 568 aaKnown RBP12.41□□□□□ -0.42
CD4-201ENST00000011653 PDRG1Q9NUG6 133 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 USP17L8P0C7I0 530 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 TEX11Q8IYF3 940 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 IL17RAQ96F46 866 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 CHAMP1Q96JM3 812 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 ZKSCAN3Q9BRR0 538 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 CRNKL1Q9BZJ0 848 aaKnown RBP12.41□□□□□ -0.42
CD4-201ENST00000011653 GPHNQ9NQX3 736 aaPredicted RBP12.41□□□□□ -0.42
CD4-201ENST00000011653 DUOX1Q9NRD9 1551 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 RFX7Q2KHR2 1363 aa12.41□□□□□ -0.42
CD4-201ENST00000011653 E7EWF7 191 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 BAG3O95817 575 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 LDHCP07864 332 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 AK2P54819 239 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 RALYLQ86SE5 291 aaKnown RBP12.4□□□□□ -0.42
CD4-201ENST00000011653 SYAP1Q96A49 352 aaPredicted RBP12.4□□□□□ -0.42
CD4-201ENST00000011653 CTNNA3Q9UI47 895 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 B4E1Z4 1266 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 SLURP2P0DP57 97 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 TBC1D10CQ8IV04 446 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 QSER1Q2KHR3 1735 aa12.4□□□□□ -0.42
CD4-201ENST00000011653 SHTN1A0MZ66 631 aa12.4□□□□□ -0.43
CD4-201ENST00000011653 OFD1O75665 1012 aa12.4□□□□□ -0.43
CD4-201ENST00000011653 GSTO1P78417 241 aa12.4□□□□□ -0.43
CD4-201ENST00000011653 RTFDC1Q9BY42 306 aaPredicted RBP12.4□□□□□ -0.43
CD4-201ENST00000011653 DAGLAQ9Y4D2 1042 aa12.4□□□□□ -0.43
CD4-201ENST00000011653 KDM4AO75164 1064 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 TRDNQ13061 729 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 GPR162Q16538 588 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 DACT2Q5SW24 774 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 NKX2-3Q8TAU0 364 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 NOL7Q9UMY1 257 aaKnown RBP12.39□□□□□ -0.43
CD4-201ENST00000011653 CLRN2A0PK11 232 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 POLR3DP05423 398 aaPredicted RBP12.39□□□□□ -0.43
CD4-201ENST00000011653 CXCL9Q07325 125 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 STRIP1Q5VSL9 837 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 NECAB1Q8N987 351 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 USP40Q9NVE5 1235 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 MTMR7Q9Y216 660 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 MROH7-TTC4A0A0A0MT08 1334 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 ARAP2Q8WZ64 1704 aa12.39□□□□□ -0.43
CD4-201ENST00000011653 PSMA5P28066 241 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 CRKP46108 304 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 SOGA3Q5TF21 947 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 ZSCAN29Q8IWY8 852 aaPredicted RBP12.38□□□□□ -0.43
CD4-201ENST00000011653 TEKT1Q969V4 418 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 DYNLL2Q96FJ2 89 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 PSMD1Q99460 953 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 FAM205AQ6ZU69 1335 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 WDR33Q9C0J8 1336 aaKnown RBP12.38□□□□□ -0.43
CD4-201ENST00000011653 RANBP6O60518 1105 aaKnown RBP12.38□□□□□ -0.43
CD4-201ENST00000011653 Q6ZUG5 572 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 RUFY3Q7L099 469 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 TDRD3Q9H7E2 651 aaKnown RBP12.38□□□□□ -0.43
CD4-201ENST00000011653 DCP1AQ9NPI6 582 aaPredicted RBP12.38□□□□□ -0.43
CD4-201ENST00000011653 ZNRF3Q9ULT6 936 aa12.38□□□□□ -0.43
CD4-201ENST00000011653 BRF1Q92994 677 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 PRELPP51888 382 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 OGFOD1Q8N543 542 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 SLC44A5Q8NCS7 719 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 VEZTQ9HBM0 779 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 MYH7P12883 1935 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 ZNF500O60304 480 aaPredicted RBP12.37□□□□□ -0.43
CD4-201ENST00000011653 GNAT2P19087 354 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 RXRAP19793 462 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 PPARAQ07869 468 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 MFSD6Q6ZSS7 791 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 TSPY26PQ9H489 355 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 CCDC39Q9UFE4 941 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 SCN9AQ15858 1988 aa12.37□□□□□ -0.43
CD4-201ENST00000011653 SALL1Q9NSC2 1324 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 LARGE1O95461 756 aa12.36□□□□□ -0.43
CD4-201ENST00000011653 YBX3P16989 372 aaKnown RBP eCLIP12.36□□□□□ -0.43
CD4-201ENST00000011653 NFIAQ12857 509 aa12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms