RNA–Protein interactions for RNA: ENSMUST00000210789.1

Prpf40a-208, Transcript of Pre-mRNA-processing factor 40 homolog A, mousemouse

APPRIS ALT2 TSL 5 BASIC

Gene Prpf40a, Length 3,773 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40a-208ENSMUST00000210789 Yipf3Q3UDR8 347 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Sco1Q5SUC9 284 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Cadps2Q8BYR5 1297 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Prpf6Q91YR7 941 aaKnown RBP10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Noa1Q9JJG9 693 aaKnown RBP10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 C5P06684 1680 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Fbf1A2A870 1173 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Trove2O08848 538 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Adam1aQ60813 791 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Cplx4Q80WM3 160 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Rint1Q8BZ36 792 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 OplahQ8K010 1288 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Matr3Q8K310 846 aaKnown RBP10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Pcdhga10Q91XY9 930 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Chd4Q6PDQ2 1915 aaKnown RBP10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Tom1O88746 492 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ddr1Q03146 911 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 RalgdsQ03385 852 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ell2Q3UKU1 639 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ano1Q8BHY3 960 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gpatch3Q8BIY1 525 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Tmem87aQ8BXN9 555 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Pcdhb3Q91XZ7 784 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 ZwintQ9CQU5 252 aa10.05□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Vmn2r78K7N6U5 853 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Q3TQI7 289 aaKnown RBP10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Cand2Q6ZQ73 1235 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Rhot2Q8JZN7 620 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Srgap1Q91Z69 1062 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Bloc1s2Q9CWG9 143 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 TraddQ3U0V2 310 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ggnbp2Q5SV77 696 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ranbp17Q99NF8 1088 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 TnksQ6PFX9 1320 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ptpn20O55082 426 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Cep112Q5PR68 954 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 PnocQ64387 187 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Tpp2Q64514 1262 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 PolnQ7TQ07 864 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Trpa1Q8BLA8 1125 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Hps3Q91VB4 1002 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Calr3Q9D9Q6 380 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 NalcnQ8BXR5 1738 aa10.04□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Zscan18E9PUD6 809 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Kcnd1Q03719 651 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ksr1Q61097 873 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Btbd11Q6GQW0 1109 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 HdlbpQ8VDJ3 1268 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Mrps25Q9D125 171 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Txnrd1Q9JMH6 613 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 IncenpQ9WU62 880 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Als2Q920R0 1651 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 E9QMW4 1145 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Card10P58660 1021 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Csrnp1P59054 583 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 EspnlQ3UYR4 1005 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Gja3Q64448 417 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Galnt17Q7TT15 598 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Msantd4Q91YU3 345 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Rad50P70388 1312 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 N4bp2F8VQG7 1678 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Zfp42P22227 288 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Pdrg1P59048 133 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ezh1P70351 747 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Zfyve27Q3TXX3 415 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Serpinb6dQ3UWK8 375 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Orc2Q60862 576 aaKnown RBP10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Cdc23Q8BGZ4 597 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Anapc5Q8BTZ4 740 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Q8C5K5 320 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Slf1Q8R3P9 1054 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Card14Q99KF0 999 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Erc1Q99MI1 1120 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Nphp1Q9QY53 687 aa10.03□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ugt1a6bK9J7B2 531 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Sap30bpQ02614 308 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ric8aQ3TIR3 530 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Nol8Q3UHX0 1147 aaKnown RBP10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Mum1l1Q4VA55 681 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ugt1a6Q64435 531 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Unc5clQ6R653 518 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ugt1a7cQ6ZQM8 531 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Eif4bQ8BGD9 611 aaKnown RBP10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Ccser1Q8C0C4 895 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Exd1Q8CDF7 570 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Srgap2Q91Z67 1071 aa10.02□□□□□ -0.8
Prpf40a-208ENSMUST00000210789 Foxn2E9Q7L6 429 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Arhgap44Q5SSM3 814 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Fam71bQ5STT6 665 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Rassf2Q8BMS9 326 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Rbm41Q8JZV4 413 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Gle1Q8R322 699 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Thsd7aQ69ZU6 1645 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Efcab14Q8BGQ6 484 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Eva1bQ8K2Y3 164 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Ppp1r42Q8R1Z4 357 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Rab27aQ9ERI2 221 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 PyglQ9ET01 850 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Kif1aP33173 1695 aa10.02□□□□□ -0.81
Prpf40a-208ENSMUST00000210789 Sipa1l2Q80TE4 1722 aa10.02□□□□□ -0.81
Retrieved 100 of 22,080 RNA–protein pairs in 14.2 ms