RNA–Protein interactions for RNA: ENSMUST00000113707.8

Tpm1-216, Transcript of Tropomyosin alpha-1 chain, mousemouse

TSL 1 (best) BASIC

Gene Tpm1, Length 1,898 nt, Biotype protein coding, Subcellular localisation Axon .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Tpm1-216ENSMUST00000113707 Pus7lQ8CE46 702 aa29.97■■■□□ 2.39
Tpm1-216ENSMUST00000113707 SrrtQ99MR6 875 aaKnown RBP29.97■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Slc1a4O35874 532 aa29.97■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Slitrk3Q810B9 980 aa29.97■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Rtn1Q8K0T0 780 aa29.97■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Ccdc6D3YZP9 469 aa29.96■■■□□ 2.39
Tpm1-216ENSMUST00000113707 PdcQ9QW08 244 aa29.96■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Mtcl1Q3UHU5 1945 aa29.96■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Ccng2O08918 344 aa29.95■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Adam7O35227 789 aa29.95■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Terf1P70371 421 aa29.95■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Ppp2r5bQ6PD28 497 aa29.95■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Myl6bQ8CI43 207 aa29.95■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Gtf2iQ9ESZ8 998 aaKnown RBP29.95■■■□□ 2.39
Tpm1-216ENSMUST00000113707 Lnx1O70263 728 aa29.95■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Usp28Q5I043 1051 aa29.95■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Nell2Q61220 819 aa29.95■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Wasf1Q8R5H6 559 aa29.95■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Myh6Q02566 1938 aaKnown RBP29.95■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Prr16A3KMN5 304 aa29.94■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Ces1hD3Z298 562 aa29.94■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Pcmtd1P59913 357 aa29.94■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Fxr1Q61584 677 aaKnown RBP29.94■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Lrrc2Q8VDB8 371 aa29.94■■■□□ 2.38
Tpm1-216ENSMUST00000113707 PnnO35691 725 aaKnown RBP29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 TbcaP48428 108 aaKnown RBP29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 XpcP51612 930 aa29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Tango6Q8C3S2 1079 aa29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 ParnQ8VDG3 624 aa29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Ccdc112A0AUP1 442 aa29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Usp17lbE9Q9U0 468 aa29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 TrhQ62361 256 aa29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Plcd3Q8K2J0 785 aa29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Dnttip2Q8R2M2 758 aaKnown RBP29.93■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Zfp831A2ADM8 1628 aa29.92■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Nrxn2E9Q7X7 1710 aa29.92■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Ano3A2AHL1 981 aa29.92■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Chrna5Q2MKA5 467 aa29.92■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Tbc1d5Q80XQ2 815 aa29.92■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Hps4Q99KG7 671 aa29.92■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Stac3Q8BZ71 360 aa29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Rai14Q9EP71 979 aaKnown RBP29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Plekhg2Q6KAU7 1340 aa29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Calm1P0DP26 149 aaKnown RBP29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Calm2P0DP27 149 aaKnown RBP29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Calm3P0DP28 149 aaKnown RBP29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Znf18Q810A1 556 aa29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Evc2Q8K1G2 1220 aa29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Myoz2Q9JJW5 264 aa29.91■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Wdr33Q8K4P0 1330 aaKnown RBP29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Ythdc1E9Q5K9 736 aaKnown RBP29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 SlkO54988 1233 aa29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Traf3ip1Q149C2 625 aa29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Tmtc2Q56A06 836 aa29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 ErfeQ6PGN1 340 aa29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Mboat7Q8CHK3 473 aa29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Scn9aQ62205 1984 aa29.9■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Tbc1d8bA3KGB4 1114 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Kif3aP28741 701 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Znf667Q2TL60 609 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Kif1bpQ6ZPU9 617 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Acnat2Q8BGG9 420 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Slc51aQ8R000 340 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Pcdhb5Q91XZ5 792 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Bicd2Q921C5 820 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Col4a3bpQ9EQG9 624 aa29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 Znf638Q61464 1960 aaKnown RBP29.89■■■□□ 2.38
Tpm1-216ENSMUST00000113707 1700113H08RikE9Q9Q5 327 aa29.89■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Kifc2O08672 792 aa29.89■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Prpf38aQ4FK66 312 aaKnown RBP29.89■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Nup133Q8R0G9 1155 aa29.89■■■□□ 2.37
Tpm1-216ENSMUST00000113707 HibadhQ99L13 335 aaKnown RBP29.89■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Lamb1P02469 1786 aa29.88■■■□□ 2.37
Tpm1-216ENSMUST00000113707 UncxO08934 530 aa29.88■■■□□ 2.37
Tpm1-216ENSMUST00000113707 DnttP09838 530 aa29.88■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Dnm1P39053 867 aa29.88■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Gm28047Q3US59 414 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Pramel6Q810Y9 485 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Dynll2Q9D0M5 89 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Jag1Q9QXX0 1218 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Ftl1P29391 183 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Cplx1P63040 134 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Ankrd13aQ80UP5 588 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Ccer1Q9CQL2 403 aa29.87■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Grem2O88273 168 aa29.86■■■□□ 2.37
Tpm1-216ENSMUST00000113707 DlatQ8BMF4 642 aa29.86■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Ndufv1Q91YT0 464 aa29.86■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Cep89Q9CZX2 791 aa29.86■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Nfe2l3Q9WTM4 660 aa29.86■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Stk39Q9Z1W9 556 aa29.86■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Mtmr2Q9Z2D1 643 aa29.86■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Gm36210A0A1B0GS00 229 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Nmt2O70311 529 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Glis3Q6XP49 780 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Kdm4aQ8BW72 1064 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Zscan20B2KFW1 1030 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Cfap58B2RW38 873 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Lmnb1P14733 588 aaKnown RBP29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Lins1Q3U1D0 764 aa29.85■■■□□ 2.37
Tpm1-216ENSMUST00000113707 Aak1Q3UHJ0 959 aa29.85■■■□□ 2.37
Retrieved 100 of 22,080 RNA–protein pairs in 68.7 ms