RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Ranbp6Q8BIV3 1105 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Kif2bQ8C0N1 668 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Atp6v1e2Q9D593 226 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Gm10110D3Z5M2 615 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Gm5168Q4KL04 211 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 ApobrQ8VBT6 942 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Tnnc2P20801 160 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Krt80Q0VBK2 452 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Hddc2Q3SXD3 199 aa20.32■□□□□ 0.84
Trim71-201ENSMUST00000111816 Akap5D3YVF0 745 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ltv1Q6NSQ7 470 aaKnown RBP20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Znf18Q810A1 556 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Krt75Q8BGZ7 551 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Saal1Q9D2C2 474 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Patl1Q3TC46 770 aaKnown RBP20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 DlatQ8BMF4 642 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Thap12Q9CUX1 758 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ccdc105Q9D4K7 499 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Amotl2Q8K371 772 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Mrps22Q9CXW2 359 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Pdzd4Q9QY39 772 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 RpsaP14206 295 aaKnown RBP20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ctnna1P26231 906 aaKnown RBP20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Gimap8Q75N62 688 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 NonoQ99K48 473 aaKnown RBP20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Rapgef1Q3UHC1 1224 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Kif21aQ9QXL2 1672 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ift140E9PY46 1464 aa20.31■□□□□ 0.84
Trim71-201ENSMUST00000111816 Parp2O88554 559 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Cd109Q8R422 1442 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 TxlngQ8BHN1 524 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ddx41Q91VN6 622 aaKnown RBP20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 2310002L09RikQ9D7L5 217 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Olfm3P63056 478 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ccdc68Q8BVC4 333 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Cabcoco1Q8CDT7 208 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 A630010A05RikA9C473 232 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Nucks1Q80XU3 234 aaKnown RBP20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Kif9Q9WV04 790 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Mtmr7Q9Z2C9 660 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Spocd1B1ASB6 936 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Pdzd8B9EJ80 1147 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Trim71Q1PSW8 855 aaKnown RBP20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Klhl14Q69ZK5 630 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Myo1gQ5SUA5 1024 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ifih1Q8R5F7 1025 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Angptl3Q9R182 455 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Snx1Q9WV80 522 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 Kank1E9Q238 1360 aa20.3■□□□□ 0.84
Trim71-201ENSMUST00000111816 ChkbO55229 394 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Pde4dQ01063 747 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Sbno1Q689Z5 1390 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 ScinQ60604 715 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 HgsQ99LI8 775 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Mtrf1lQ8BJU9 373 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Spata2Q8K004 515 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Zscan18E9PUD6 809 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 SpertQ32MG2 446 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Slc26a7Q8R2Z3 656 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ppil4Q9CXG3 492 aaKnown RBP20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Pfdn4Q3UWL8 134 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Rassf6Q80UQ2 353 aa20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Fam133bQ9CVI2 245 aaKnown RBP20.29■□□□□ 0.84
Trim71-201ENSMUST00000111816 Lcmt1A0A0U1RNF2 332 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Cct6aP80317 531 aaKnown RBP20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Trim12aQ99PQ1 284 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 ErmapQ9JLN5 566 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Myh14Q6URW6 2000 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ccdc153P0C7Q1 202 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Pdrg1P59048 133 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ccdc154Q6RUT8 657 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Gm10093D3YYI8 482 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Hdac1O09106 482 aaKnown RBP20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 EmbP21995 330 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Rint1Q8BZ36 792 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Zmynd15Q8C0R7 736 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ube4aE9Q735 1028 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Rnf8Q8VC56 488 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Plekhg2Q6KAU7 1340 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Zmym4A2A791 1549 aaKnown RBP20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Palm3A2TJV2 734 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Armc3A2AU72 881 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Mmrn2A6H6E2 943 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 Zbtb21E9Q444 1094 aa20.28■□□□□ 0.84
Trim71-201ENSMUST00000111816 NsmfQ99NF2 532 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 Lzts1P60853 599 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 Fam228aQ8CDW1 299 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 PalmQ9Z0P4 383 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ckap2lQ7TS74 745 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ctnna3Q65CL1 895 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ppp1r10Q80W00 888 aaKnown RBP20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 Ube3bQ9ES34 1070 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 Dach1Q9QYB2 751 aa20.27■□□□□ 0.84
Trim71-201ENSMUST00000111816 NxnP97346 435 aa20.27■□□□□ 0.83
Trim71-201ENSMUST00000111816 Igsf3Q6ZQA6 1194 aa20.27■□□□□ 0.83
Trim71-201ENSMUST00000111816 Q7TT23 1179 aa20.27■□□□□ 0.83
Trim71-201ENSMUST00000111816 Prpf40bQ80W14 870 aa20.27■□□□□ 0.83
Trim71-201ENSMUST00000111816 Lmod1Q8BVA4 595 aa20.27■□□□□ 0.83
Trim71-201ENSMUST00000111816 Gys2Q8VCB3 704 aa20.27■□□□□ 0.83
Trim71-201ENSMUST00000111816 Larp1bA0A0A6YXJ7 370 aaKnown RBP20.26■□□□□ 0.83
Retrieved 100 of 22,080 RNA–protein pairs in 11.8 ms