RNA–Protein interactions for RNA: ENSMUST00000108661.7

Chd3-202, Transcript of Chromodomain helicase DNA-binding protein 3, mousemouse

APPRIS P2 TSL 5 BASIC

Gene Chd3, Length 7,261 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Chd3-202ENSMUST00000108661 Slc4a7Q8BTY2 1034 aa12.78□□□□□ -0.36
Chd3-202ENSMUST00000108661 Pcdhb22Q91XZ8 794 aa12.78□□□□□ -0.36
Chd3-202ENSMUST00000108661 Nphp4P59240 1425 aa12.78□□□□□ -0.36
Chd3-202ENSMUST00000108661 Eif4a1P60843 406 aaKnown RBP12.77□□□□□ -0.36
Chd3-202ENSMUST00000108661 Cd2bp2Q9CWK3 342 aaKnown RBP12.77□□□□□ -0.36
Chd3-202ENSMUST00000108661 Ybx3Q9JKB3 361 aaKnown RBP12.77□□□□□ -0.36
Chd3-202ENSMUST00000108661 Fam184aE9PW83 1143 aa12.77□□□□□ -0.36
Chd3-202ENSMUST00000108661 Tspyl1O88852 379 aa12.77□□□□□ -0.36
Chd3-202ENSMUST00000108661 Hoxd10P28359 340 aa12.77□□□□□ -0.36
Chd3-202ENSMUST00000108661 Hirip3Q8BLH7 601 aa12.77□□□□□ -0.36
Chd3-202ENSMUST00000108661 Clrn2B2RVW2 232 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Plbd2Q3TCN2 594 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Nrbp2Q91V36 499 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Abca16E9PWJ7 1678 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Adgrl1Q80TR1 1466 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Zhx1P70121 873 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Fam47cQ14BE7 430 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Q3UJP5 209 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ift88Q61371 824 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Fam208aQ69ZR9 1610 aaKnown RBP12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Gimd1E9PW74 217 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ankrd35E9Q9D8 996 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ccdc93Q7TQK5 629 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Kif17Q99PW8 1038 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Bcs1lQ9CZP5 418 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Btn2a2A4QPC6 514 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Gm1661E9Q963 441 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Tmod1P49813 359 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ankrd40Q5SUE8 363 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Myl10Q62082 202 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ssh1Q76I79 1042 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Plcd3Q8K2J0 785 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Terf2ipQ91VL8 393 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Sept6Q9R1T4 434 aa12.77□□□□□ -0.37
Chd3-202ENSMUST00000108661 Lrp2bpQ9D4C6 346 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Fam178bQ24JP3 464 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ccdc83Q9D4V3 305 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Nucb2P81117 420 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Tex35Q14BK3 207 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Adora1Q60612 326 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Eif3j2Q66JS6 263 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 FibpQ9JI19 357 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Rreb1Q3UH06 1700 aaKnown RBP12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Duxf3A0A0N4SV92 674 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Cct8l1Q80YT3 562 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Spata21Q8BHW6 681 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Serpina3bQ8BYY9 420 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 ClasrpQ8CFC7 668 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 BrapQ99MP8 591 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Abcb4P21440 1276 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Sec63Q8VHE0 760 aaKnown RBP12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 AmfrQ9R049 643 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Abcc3B2RX12 1523 aa12.76□□□□□ -0.37
Chd3-202ENSMUST00000108661 Nkx1-2P42580 305 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ftl2P49945 183 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 DeptorQ570Y9 409 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Sv2cQ69ZS6 727 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Srp68Q8BMA6 625 aaKnown RBP12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 GnptabQ69ZN6 1235 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ncoa5Q91W39 579 aaKnown RBP12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 YarsQ91WQ3 528 aaKnown RBP12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Nos1Q9Z0J4 1429 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Sept7O55131 436 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 LlphQ9D945 130 aaKnown RBP12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Gm18336A0A140LIU8 765 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Copb2O55029 905 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Armc2Q3URY6 854 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Gas7Q60780 421 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Twf2Q9Z0P5 349 aaKnown RBP12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Nid2O88322 1403 aa12.75□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ets1P27577 440 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 F2rP30558 430 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Rexo1Q7TT28 1213 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Arpp21Q9DCB4 807 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Flt1P35969 1333 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Plch2A2AP18 1501 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Uri1Q3TLD5 531 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 IqcgQ80W32 419 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 BaatQ91X34 420 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Akt1s1Q9D1F4 257 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Lbhd1A0A087WPA0 259 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ifi207E9Q3L4 978 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Zbtb1Q91VL9 713 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 3425401B19RikD3Z1D3 1412 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Hmgb1P63158 215 aaKnown RBP12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Aldh1l2Q8K009 923 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Hexim1Q8R409 356 aaKnown RBP12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Stk36Q69ZM6 1316 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Tagap1P0CAX8 505 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Rapgef1Q3UHC1 1224 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Fgfr1opQ66JX5 399 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Ncaph2Q8BSP2 607 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Als2cr12Q8BVM7 383 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Six6os1Q9CTN5 574 aa12.74□□□□□ -0.37
Chd3-202ENSMUST00000108661 Dync1li2Q6PDL0 492 aaKnown RBP12.73□□□□□ -0.37
Chd3-202ENSMUST00000108661 Galnt17Q7TT15 598 aa12.73□□□□□ -0.37
Chd3-202ENSMUST00000108661 Efhd1Q9D4J1 240 aa12.73□□□□□ -0.37
Chd3-202ENSMUST00000108661 Rps6ka4Q9Z2B9 773 aa12.73□□□□□ -0.37
Chd3-202ENSMUST00000108661 L3mbtl2P59178 703 aa12.73□□□□□ -0.37
Chd3-202ENSMUST00000108661 Zbtb40Q6PCS8 1258 aa12.73□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 14.4 ms