RNA–Protein interactions for RNA: ENSMUST00000108593.7

Ctdnep1-201, Transcript of CTD nuclear envelope phosphatase 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ctdnep1, Length 1,627 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdnep1-201ENSMUST00000108593 Prl7a2O54831 253 aa36.18■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Acap3Q6NXL5 833 aa36.18■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Rnf123Q5XPI3 1314 aa36.17■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Gm11437Q5QR91 290 aa36.17■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 ImmtQ8CAQ8 757 aaKnown RBP36.17■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Plxnb2B2RXS4 1842 aa36.17■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Hand2Q61039 217 aa36.16■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Mapk4Q6P5G0 583 aa36.16■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Jakmip1Q8BVL9 626 aa36.16■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Plekhg2Q6KAU7 1340 aa36.16■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Il7P10168 154 aa36.16■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Znf667Q2TL60 609 aa36.16■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 L1camP11627 1260 aa36.15■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 VrtnQ3SYK4 740 aa36.15■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Ccdc148Q6P5U8 527 aa36.15■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 KhnynQ80U38 671 aa36.15■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Atrnl1Q6A051 1378 aa36.14■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Abl1P00520 1123 aa36.14■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Ms4a2P20490 235 aa36.14■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Eif5P59325 429 aaKnown RBP36.14■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Rassf8Q8CJ96 419 aa36.14■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Usp42B2RQC2 1324 aaKnown RBP36.13■■■■□ 3.38
Ctdnep1-201ENSMUST00000108593 Lamb1P02469 1786 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Pde11aP0C1Q2 933 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Ercc3P49135 783 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Rbm46P86049 533 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Rnf20Q5DTM8 973 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Spty2d1Q68FG3 682 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Shisa4Q8CA71 197 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Dynll2Q9D0M5 89 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Rgs12Q8CGE9 1381 aa36.13■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Ano3A2AHL1 981 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Q3TYL0 343 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Slc10a4Q3UEZ8 437 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Exoc8Q6PGF7 716 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Tshz3Q8CGV9 1081 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Tfip11Q9ERA6 838 aaKnown RBP36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Myh2G3UW82 1942 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Cd3dP04235 173 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Cxcl9P18340 126 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 FAM186AQ9D9R9 1790 aa36.12■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Tnni2P13412 182 aa36.11■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Ncf1Q09014 390 aa36.11■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Slc9c1Q6UJY2 1175 aa36.11■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Phf20Q8BLG0 1010 aaKnown RBP36.11■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Styxl1Q9DAR2 321 aa36.11■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Hmg20bQ9Z104 317 aa36.11■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Cacna1fQ9JIS7 1985 aa36.11■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Bace1P56818 501 aa36.1■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Nlgn2Q69ZK9 836 aa36.1■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 C8aQ8K182 587 aa36.1■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Ttll12Q3UDE2 639 aa36.09■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Cnot6lQ8VEG6 555 aa36.09■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Bap1Q99PU7 728 aa36.09■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Casp12O08736 419 aa36.08■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Htatsf1Q8BGC0 757 aa36.08■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Cdk8Q8R3L8 464 aa36.08■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Upf1Q9EPU0 1124 aaKnown RBP36.08■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Pitpnm2Q6ZPQ6 1335 aa36.08■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Aak1Q3UHJ0 959 aa36.08■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Col2a1P28481 1487 aa36.07■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Fam205a1D3YZF6 1314 aa36.07■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 XdhQ00519 1335 aa36.07■■■■□ 3.37
Ctdnep1-201ENSMUST00000108593 Cep131Q62036 1060 aa36.07■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Ipo8Q7TMY7 1010 aa36.07■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Rnf41Q8BH75 317 aa36.07■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Spata21Q8BHW6 681 aa36.07■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Scnn1aQ61180 699 aa36.06■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Gja3Q64448 417 aa36.06■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Snapc2Q91XA5 359 aa36.06■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Ndufv1Q91YT0 464 aa36.06■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Tjap1Q9DCD5 539 aa36.06■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 GrapQ9CX99 217 aa36.05■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Efcc1Q9JJF6 558 aa36.05■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Ltbp2O08999 1813 aa36.05■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Llgl2Q3TJ91 1027 aa36.05■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Otop3Q80UF9 577 aa36.05■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Cyp3a59D3Z2W7 503 aa36.04■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Ythdc1E9Q5K9 736 aaKnown RBP36.04■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 SobpQ0P5V2 864 aa36.04■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Krt74Q6IFZ9 495 aa36.04■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Senp5Q6NXL6 749 aa36.04■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Atf7Q8R0S1 413 aa36.04■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Krt84Q99M73 603 aa36.04■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Mmp20P57748 482 aa36.03■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Znf287Q9EQB9 759 aa36.03■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Il21rQ9JHX3 529 aa36.03■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Slc1a4O35874 532 aa36.02■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Znf326O88291 580 aa36.02■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Prkg1P0C605 671 aa36.02■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 CtshP49935 333 aa36.02■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Kif20aP97329 887 aa36.02■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Ppp1r11Q8K1L5 131 aa36.02■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Zbtb43Q9DAI4 467 aa36.02■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 A0A1W2P6Q8 802 aa36.01■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Gm9048A0A1W2P7H4 802 aa36.01■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 A0A1W2P7Z8 802 aa36.01■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Gm9046A0A1W2P855 802 aa36.01■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 MyrflQ3UN70 904 aa36.01■■■■□ 3.36
Ctdnep1-201ENSMUST00000108593 Stxbp2Q64324 593 aa36.01■■■■□ 3.36
Retrieved 100 of 22,080 RNA–protein pairs in 72.9 ms