RNA–Protein interactions for RNA: ENSMUST00000088349.2

Col9a1-202, Transcript of Collagen alpha-1(IX) chain, mousemouse

TSL 1 (best) BASIC

Gene Col9a1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Col9a1-202ENSMUST00000088349 Fam160b2Q80YR2 744 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Vps37dQ810I0 261 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tmco3Q8BH01 678 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tcp11l1Q8BTG3 509 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ccdc12Q8R344 166 aaKnown RBP13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tab2Q99K90 693 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Pik3ap1Q9EQ32 811 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Calcoco2A2A6M5 331 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Atp8b5A3FIN4 1183 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Qtrt2B8ZXI1 415 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 CrcpO35427 148 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Pla2g4bP0C871 782 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Zbtb38Q3LR78 1197 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Slf2Q6P9P0 1278 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Atp1a2Q6PIE5 1020 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Zswim4Q8C7B8 1101 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ccdc150Q8CDI7 1110 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tada3Q8R0L9 432 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Casz1Q9CWL2 1761 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Hspa4Q61316 841 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ces1dQ8VCT4 565 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tgs1Q923W1 853 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Trim11Q99PQ2 467 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Psrc1Q9D0P7 329 aa13.24□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Gm3409A0A0G2JE67 319 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Cyp3a59D3Z2W7 503 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Cyp2c23E9Q5K4 494 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Arhgef16Q3U5C8 713 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Mctp2Q5RJH2 878 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 IqcgQ80W32 419 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Krt84Q99M73 603 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Chaf1aQ9QWF0 911 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 CpdO89001 1377 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 NapbP28663 298 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Gtpbp6Q3U6U5 514 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Glis3Q6XP49 780 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Cadps2Q8BYR5 1297 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ankk1Q8BZ25 745 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Iqca1Q9CUL5 857 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Etnk1Q9D4V0 363 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Wdr64Q9D565 1086 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ccdc39Q9D5Y1 937 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Cbx6Q9DBY5 414 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tfcp2Q9ERA0 502 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Slit1Q80TR4 1531 aa13.23□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Krt24A1L317 512 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Ehd4Q9EQP2 541 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Atp1a4Q9WV27 1032 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Wdr19Q3UGF1 1341 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tpm3-rs7D3Z2H9 248 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Capn2O08529 700 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 C87499Q3UX49 493 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Evc2Q8K1G2 1220 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 SelenooQ9DBC0 667 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tulp1Q9Z273 543 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Col18a1P39061 1774 aa13.22□□□□□ -0.29
Col9a1-202ENSMUST00000088349 PsdQ5DTT2 1024 aa13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Rbm19Q8R3C6 952 aaKnown RBP13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Tjp1P39447 1745 aaKnown RBP13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Siglec1Q62230 1695 aa13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Gnl3lQ6PGG6 577 aaKnown RBP13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Epc1Q8C9X6 813 aa13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Cd209bQ8CJ91 325 aa13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Pcdhgc5Q91XW9 944 aa13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Lonrf3Q9D4H7 753 aa13.21□□□□□ -0.29
Col9a1-202ENSMUST00000088349 Naaladl2A0A0N4SUJ3 795 aa13.21□□□□□ -0.3
Col9a1-202ENSMUST00000088349 ItpripQ3TNL8 555 aa13.21□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Exoc5Q3TPX4 708 aa13.21□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ufl1Q8CCJ3 793 aaKnown RBP13.21□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Nek3Q9R0A5 511 aa13.21□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Cyp2j7A0A140T8U1 504 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Map7d2A2AG50 781 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Trim34bJ3QNR8 485 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Pold4Q9CWP8 107 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ppil4Q9CXG3 492 aaKnown RBP13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Rapgef4Q9EQZ6 1011 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Zranb2Q9R020 330 aaKnown RBP13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Mast3Q3U214 1321 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 A0A1L1SQF0 893 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Pet2A2AHY8 747 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ccdc191J3QQ27 883 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Otop3Q80UF9 577 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Asnsd1Q8BFS9 627 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Susd4Q8BH32 490 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Zc3h6Q8BYK8 1177 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 NenfQ9CQ45 171 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 MicalclQ9D5U9 680 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Hic2Q9JLZ6 619 aaKnown RBP13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Unc13bQ9Z1N9 1602 aa13.2□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Zfp142G5E869 1843 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Dhx8A2A4P0 1244 aaKnown RBP13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Hap1O35668 628 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Myl3P09542 204 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Ifit1bl2Q3U687 466 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Csrnp2Q8BGQ2 534 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Sox30Q8CGW4 782 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Rtn1Q8K0T0 780 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Smc1aQ9CU62 1233 aaKnown RBP13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Gli3Q61602 1583 aa13.19□□□□□ -0.3
Col9a1-202ENSMUST00000088349 Cep63Q3UPP8 700 aa13.19□□□□□ -0.3
Retrieved 100 of 22,080 RNA–protein pairs in 18.2 ms