RNA–Protein interactions for RNA: ENSMUST00000077689.13

Ssh1-201, Transcript of Protein phosphatase Slingshot homolog 1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ssh1, Length 3,164 nt, Biotype protein coding, Subcellular localisation Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ssh1-201ENSMUST00000077689 Brd3Q8K2F0 726 aaKnown RBP12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Cdca7lQ922M5 438 aa12.99□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Csrnp1P59054 583 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Stim1P70302 685 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Gigyf2Q6Y7W8 1291 aaKnown RBP12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 PolnQ7TQ07 864 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Fam193aQ8CGI1 1231 aaKnown RBP12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Adcy3Q8VHH7 1145 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Aox2Q5SGK3 1345 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ccdc152E9PX14 254 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Taf4bG5E8Z2 855 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Slc1a4O35874 532 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Sap30bpQ02614 308 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 RalgdsQ03385 852 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ccdc138Q0VF22 680 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Ccdc181Q80ZU5 509 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Col14a1Q80X19 1797 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Abcc12Q80WJ6 1366 aa12.98□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Folh1O35409 752 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Zfy1P10925 782 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Gpatch3Q8BIY1 525 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Me3Q8BMF3 604 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Mrpl50Q8VDT9 159 aaKnown RBP12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Themis2Q91YX0 663 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Sipa1l2Q80TE4 1722 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Pkp1P97350 728 aaKnown RBP12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Camsap3Q80VC9 1252 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 ThemisQ8BGW0 636 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Cdc23Q8BGZ4 597 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Fbxo38Q8BMI0 1194 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 TnrQ8BYI9 1358 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Arfgef2A2A5R2 1792 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Nat1P50294 290 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Pa2g4P50580 394 aaKnown RBP12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Slc8a1P70414 970 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Irf9Q61179 399 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 NntQ61941 1086 aaKnown RBP12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Sorbs1Q62417 1290 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Suds3Q8BR65 328 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Pex19Q8VCI5 299 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Tgs1Q923W1 853 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Pdzd9Q9D9M4 266 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Entpd5Q9WUZ9 427 aa12.97□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Nphp3Q7TNH6 1325 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Cct4P80315 539 aaKnown RBP12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Cnnm1Q0GA42 951 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Cep112Q5PR68 954 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Kcna6Q61923 529 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 TrhQ62361 256 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Traf3ip3Q8C0G2 513 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Cep57l1Q8VDS7 400 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Nup153E9Q3G8 1462 aaKnown RBP12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 E9QMW4 1145 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Pde8aO88502 823 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Mpp4Q6P7F1 635 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 SympkQ80X82 1284 aa12.96□□□□□ -0.33
Ssh1-201ENSMUST00000077689 Nfat5Q9WV30 1534 aa12.96□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Ccdc191J3QQ27 883 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Tgfb1i1Q62219 461 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 BcrQ6PAJ1 1270 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Stkld1Q80YS9 662 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 ZwintQ9CQU5 252 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Eef2kO08796 724 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Pla2g4aP47713 748 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 CrklP47941 303 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Trim80Q3V061 624 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Aldh5a1Q8BWF0 523 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Kif2bQ8C0N1 668 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Brf1Q8CFK2 676 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Ranbp17Q99NF8 1088 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Taf7Q9R1C0 341 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Adcy9P51830 1353 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Znf513Q6PD29 541 aa12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Ppp1r12aQ9DBR7 1029 aaKnown RBP12.95□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Gm3415J3QMS8 315 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Eif5P59325 429 aaKnown RBP12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Surf6P70279 355 aaKnown RBP12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 ItgadQ3V0T4 1168 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Dpf2Q61103 391 aaKnown RBP12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Pip4k2bQ80XI4 416 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Ano1Q8BHY3 960 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Mettl5Q8K1A0 209 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Dnajc28Q8VCE1 385 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 SncbQ91ZZ3 133 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 SfswapQ3USH5 945 aaKnown RBP12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 CtcfQ61164 736 aaKnown RBP12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Unc5clQ6R653 518 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Lrsam1Q80ZI6 727 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Trpa1Q8BLA8 1125 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Ccer1Q9CQL2 403 aa12.94□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Cdr2P97817 455 aa12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Eif3j1Q3UGC7 261 aaKnown RBP12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Ifit1Q64282 463 aa12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Eif3j2Q66JS6 263 aa12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Noc3lQ8VI84 807 aaKnown RBP12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Abt1Q9QYL7 269 aaKnown RBP12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Col15a1O35206 1367 aa12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Myo1eE9Q634 1107 aa12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 LtkP08923 888 aa12.93□□□□□ -0.34
Ssh1-201ENSMUST00000077689 Cplx4Q80WM3 160 aa12.93□□□□□ -0.34
Retrieved 100 of 22,080 RNA–protein pairs in 62.8 ms