RNA–Protein interactions for RNA: ENSMUST00000040783.10

Usp40-201, Transcript of Ubiquitin carboxyl-terminal hydrolase 40, mousemouse

APPRIS P3 TSL 1 (best) BASIC

Gene Usp40, Length 5,049 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Usp40-201ENSMUST00000040783 1700018F24RikB2RW27 314 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Fam186bD3Z420 943 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ranbp1P34022 203 aaKnown RBP8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Nacc1Q7TSZ8 514 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Trim52Q8CDV4 233 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ctage5Q8R311 779 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Uba5Q8VE47 403 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Calml3Q9D6P8 149 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Rcan3Q9JKK0 239 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Tbc1d2B1AVH7 922 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Luc7l2Q7TNC4 392 aaKnown RBP8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Galnt17Q7TT15 598 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Hexim1Q8R409 356 aaKnown RBP8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Lrrc2Q8VDB8 371 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Emilin1Q99K41 1017 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Syce1Q9D495 329 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Lonrf3Q9D4H7 753 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Acot9Q9R0X4 439 aaKnown RBP8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Pde8bE9Q4S1 865 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Prpf38aQ4FK66 312 aaKnown RBP8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Q4VA45 678 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Myl10Q62082 202 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Tmx3Q8BXZ1 456 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Rps6ka5Q8C050 863 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Dis3l2Q8CI75 870 aaKnown RBP8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Prpf40aQ9R1C7 953 aaKnown RBP8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Abcc4E9Q236 1325 aa8.43□□□□□ -1.06
Usp40-201ENSMUST00000040783 Zscan18E9PUD6 809 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Serpinc1P32261 465 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Eya3P97480 510 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Lrrc36Q3V0M2 755 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Elf1Q60775 612 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 PrimpolQ6P1E7 537 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 4931400O07RikQ9D4M5 137 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Myo3aQ8K3H5 1613 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Zkscan16A2ALW2 728 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 SdsQ8VBT2 327 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Nxf1Q99JX7 618 aaKnown RBP8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Grpel1Q99LP6 217 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ube3bQ9ES34 1070 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Prl7a2O54831 253 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Akap2O54931 893 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Rpl13P47963 211 aaKnown RBP8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Esyt1Q3U7R1 1092 aaKnown RBP8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Serpina10Q8R121 448 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 WaslQ91YD9 501 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Rbm43Q99J64 343 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ciao1Q99KN2 339 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 AmfrQ9R049 643 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Kiaa0556Q8C753 1610 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Zfp853A0A1D5RM95 733 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Paxbp1P58501 919 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 NyxP83503 476 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Hvcn1Q3U2S8 269 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Utp18Q5SSI6 552 aaKnown RBP8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Naa25Q8BWZ3 972 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Kif17Q99PW8 1038 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Efhd1Q9D4J1 240 aa8.42□□□□□ -1.06
Usp40-201ENSMUST00000040783 Trim30cD3YVI9 513 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Usp25P57080 1055 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Prkag2Q91WG5 566 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Sem1P60897 70 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Cyp2c67Q569X9 491 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Cyp4f39Q8BGU0 532 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Tcp11l1Q8BTG3 509 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Shtn1Q8K2Q9 631 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Hecw1Q8K4P8 1604 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Tulp4Q9JIL5 1547 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Knl1Q66JQ7 1612 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Setdb1O88974 1307 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 SsbP32067 415 aaKnown RBP8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ccdc181Q80ZU5 509 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Dmrtc1Q9D9R7 182 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 FliiQ9JJ28 1271 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Simc1E9Q6E9 1354 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ttll7A4Q9F0 912 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Fam178bQ24JP3 464 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Gas8Q60779 478 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Lrsam1Q80ZI6 727 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ccnt1Q9QWV9 724 aaKnown RBP8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 Mtmr2Q9Z2D1 643 aa8.41□□□□□ -1.06
Usp40-201ENSMUST00000040783 AsnsQ61024 561 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 GnptabQ69ZN6 1235 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Naa15Q80UM3 865 aaKnown RBP8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ano10Q8BH79 659 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Klhl30Q8C3F7 581 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Golga5Q9QYE6 729 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Gjc1P28229 396 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Gpr182P43142 395 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Adcy5P84309 1262 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Gm28047Q3US59 414 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 HelbQ6NVF4 1074 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Arhgef18Q6P9R4 1021 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Kdm1aQ6ZQ88 853 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Ubac1Q8VDI7 409 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Acot11Q8VHQ9 594 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Robo2Q7TPD3 1470 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Krt13P08730 437 aa8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 LdhbP16125 334 aaKnown RBP8.4□□□□□ -1.06
Usp40-201ENSMUST00000040783 Stat5bP42232 786 aa8.4□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 19.5 ms