RNA–Protein interactions for RNA: ENSMUST00000038665.5

Ptchd1-201, Transcript of Patched domain-containing protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ptchd1, Length 2,768 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd1-201ENSMUST00000038665 HdlbpQ8VDJ3 1268 aaKnown RBP9.82□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ndufb9Q9CQJ8 179 aa9.82□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Stag1Q9D3E6 1258 aa9.82□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Col4a3bpQ9EQG9 624 aa9.82□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Kcnn1Q9EQR3 537 aa9.82□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 PdcQ9QW08 244 aa9.82□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Cdc45Q9Z1X9 566 aa9.82□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Col11a2Q64739 1736 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 TbcaP48428 108 aaKnown RBP9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Rbm26Q6NZN0 1012 aaKnown RBP9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Lrrc15Q80X72 579 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Epha10Q8BYG9 1007 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Rtn1Q8K0T0 780 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Nup133Q8R0G9 1155 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Bach2P97303 839 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Nbr1P97432 988 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Apobec3Q99J72 440 aaKnown RBP9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Mx2Q9WVP9 655 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Snapc4Q8BP86 1333 aa9.81□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ccng2O08918 344 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Prl7d1P04769 244 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Il15P48346 162 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Cplx1P63040 134 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gjb4Q02738 266 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ano6Q6P9J9 911 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Arid5bQ8BM75 1188 aaKnown RBP9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Cxcl11Q9JHH5 100 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Prr16A3KMN5 304 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Cfap58B2RW38 873 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Sptlc2P97363 560 aaKnown RBP9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gja5Q01231 358 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 CtcfQ61164 736 aaKnown RBP9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Slc44a1Q6X893 653 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Znf653Q6YND2 615 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Kcnf1Q7TSH7 493 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Slitrk3Q810B9 980 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Hook1Q8BIL5 728 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Pus7lQ8CE46 702 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ipo4Q8VI75 1082 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Krtap5-3Q9D226 196 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Igsf9bE9PZ19 1328 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Sh3tc1G3X9F6 1346 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Aox4Q3TYQ9 1336 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Zkscan7E9PVW1 718 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Zscan29E9Q5B4 869 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Myo1bP46735 1107 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 CebpzP53569 1052 aaKnown RBP9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Sec23aQ01405 765 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gzf1Q4VBD9 706 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Mdh1bQ5F204 500 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Usp49Q6P9L4 685 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 RabggtaQ9JHK4 567 aa9.8□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 A0A1W2P7S8 802 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gm3893E9Q1I1 302 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Aknad1E9Q8N6 675 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Stx8O88983 236 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Fam89aQ14BJ1 175 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Tmem109Q3UBX0 243 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 C87499Q3UX49 493 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Cdc5lQ6A068 802 aaKnown RBP9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Adck5Q80V03 582 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gpatch3Q8BIY1 525 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Tsen34Q8BMZ5 316 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Acot9Q9R0X4 439 aaKnown RBP9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Epb41l3Q9WV92 929 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Vnn1Q9Z0K8 512 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gdf11Q9Z1W4 405 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Hap1O35668 628 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Pfkfb1P70266 471 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 MycbpapQ5SUV2 932 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Cyp4x1Q6A152 507 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Pcdhb14Q6PB90 796 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ctdspl2Q8BG15 465 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Stn1Q8K2X3 378 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ndufv1Q91YT0 464 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Rai14Q9EP71 979 aaKnown RBP9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Hip1rQ9JKY5 1068 aa9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Znf638Q61464 1960 aaKnown RBP9.79□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Col4a5Q63ZW6 1691 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Prr29B1ARI9 187 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 MpndQ3TV65 487 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Fam198bQ3UPI1 517 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Rc3h1Q4VGL6 1130 aaKnown RBP9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ankrd13aQ80UP5 588 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Haus7Q8BKT8 364 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Skor1Q8BX46 964 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ptf1aQ9QX98 324 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Stk39Q9Z1W9 556 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Peak1Q69Z38 1735 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Kifc2O08672 792 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Ftl1P29391 183 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 XpcP51612 930 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gas2l3Q3UWW6 683 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Pim2Q62070 370 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 NenfQ9CQ45 171 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Cep89Q9CZX2 791 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 GdaQ9R111 454 aa9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Rbbp6P97868 1790 aaKnown RBP9.78□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gnat2P50149 354 aa9.77□□□□□ -0.84
Ptchd1-201ENSMUST00000038665 Gtf2f1Q3THK3 508 aaKnown RBP9.77□□□□□ -0.84
Retrieved 100 of 22,080 RNA–protein pairs in 27.9 ms