RNA–Protein interactions for RNA: ENSMUST00000035164.9

Topbp1-201, Transcript of DNA topoisomerase 2-binding protein 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Topbp1, Length 5,224 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Topbp1-201ENSMUST00000035164 Znf697Q569E7 569 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Phkg2Q9DB30 406 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Uchl5Q9WUP7 329 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Vnn1Q9Z0K8 512 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Tbc1d8bA3KGB4 1114 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Grin1P35438 938 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Adcy3Q8VHH7 1145 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Srgap2Q91Z67 1071 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Trim59Q922Y2 403 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Exosc10P56960 887 aaKnown RBP12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gnl3lQ6PGG6 577 aaKnown RBP12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Sdad1Q80UZ2 687 aaKnown RBP12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 RalylQ8BTF8 293 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Nup133Q8R0G9 1155 aa12.81□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Pnpla7A2AJ88 1352 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Myo5cE9Q1F5 1742 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Proca1B0QZF7 307 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Nlrp1aQ2LKU9 1182 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Igbp1Q61249 340 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gm10134F6ZQC6 126 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Vsnl1P62761 191 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Rnf34Q99KR6 376 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Cdc27A2A6Q5 825 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Slc4a4O88343 1079 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Sox5P35710 763 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Stim1P70302 685 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Nlrp9aQ66X03 949 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Apol10aQ8CCA5 318 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Rfc1P35601 1131 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Rad23bP54728 416 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Hdhd2Q3UGR5 259 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Erich4Q3UNU4 136 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 SfswapQ3USH5 945 aaKnown RBP12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Fam160b2Q80YR2 744 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Triml1Q8BVP1 470 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ccdc96Q9CR92 584 aa12.8□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Usp13Q5BKP2 858 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 March6Q6ZQ89 909 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Asic4Q7TNS7 539 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ripor2Q80U16 1078 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Csrnp2Q8BGQ2 534 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Tmem87aQ8BXN9 555 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Usp27Q8CEG8 438 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Tmem119Q8R138 280 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Tgs1Q923W1 853 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Emilin1Q99K41 1017 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 GdaQ9R111 454 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Uso1Q9Z1Z0 959 aaKnown RBP12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Sel1lQ9Z2G6 790 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Znf335A2A5K6 1337 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Kifc2O08672 792 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Nck2O55033 380 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ankrd13cQ3UX43 541 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ubac1Q8VDI7 409 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Pcdhb22Q91XZ8 794 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Efcc1Q9JJF6 558 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Rnf40Q3U319 1001 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Cyp7a1Q64505 503 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Mis18aQ9CZJ6 204 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 HdgfP51859 237 aaKnown RBP12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Brms1Q99N20 246 aa12.79□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Palm3A2TJV2 734 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ehmt1Q5DW34 1296 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Krt222Q8CCX5 294 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Abca8aQ8K442 1620 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Mroh1E0CZ22 1640 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gm28042B7ZCM9 1014 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Trim34bJ3QNR8 485 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 PpardP35396 440 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gucy2cQ3UWA6 1072 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ctnna3Q65CL1 895 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Abtb2Q7TQI7 1024 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Klhl40Q9D783 621 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Lig3P97386 1015 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Krit1Q6S5J6 736 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Telo2Q9DC40 840 aaKnown RBP12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Orc1Q9Z1N2 840 aaKnown RBP12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gucy1b3O54865 620 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 PparaP23204 468 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 HmmrQ00547 794 aaKnown RBP12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Asic3Q6X1Y6 530 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Als2cr12Q8BVM7 383 aa12.78□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ccdc114Q3UX62 658 aa12.77□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Caps2Q8BUG5 550 aa12.77□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Pcdha12Q91Y18 950 aa12.77□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Ndufab1Q9CR21 156 aa12.77□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Il7P10168 154 aa12.77□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Erlin1Q91X78 346 aa12.77□□□□□ -0.36
Topbp1-201ENSMUST00000035164 Gm5580A0A0N4SVP8 411 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ftl2P49945 183 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 RubcnlQ3TD16 648 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tspyl3Q3UYP3 334 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Nab2Q61127 525 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Spag7Q7TNE3 227 aaKnown RBP12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Tbc1d5Q80XQ2 815 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Kank3Q9Z1P7 791 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Epha2Q03145 977 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Nlrp9bQ66X22 1003 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 Ppm1mQ8BU27 406 aa12.77□□□□□ -0.37
Topbp1-201ENSMUST00000035164 2310002L09RikQ9D7L5 217 aa12.77□□□□□ -0.37
Retrieved 100 of 22,080 RNA–protein pairs in 48 ms