RNA–Protein interactions for RNA: ENSMUST00000034060.6

Sh3rf1-201, Transcript of E3 ubiquitin-protein ligase SH3RF1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Sh3rf1, Length 5,479 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Sh3rf1-201ENSMUST00000034060 Trpc3Q9QZC1 836 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Thoc2B1AZI6 1594 aaKnown RBP25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Rbm26Q6NZN0 1012 aaKnown RBP25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Tmod2Q9JKK7 351 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Rlbp1Q9Z275 317 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Nucks1Q80XU3 234 aaKnown RBP25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Spata16Q8C636 571 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Atg3Q9CPX6 314 aa25.78■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Ncf2O70145 525 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Exoc5Q3TPX4 708 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Surf6P70279 355 aaKnown RBP25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Rad17Q6NXW6 688 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Dydc2Q9D3X8 139 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Cetn3O35648 167 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Rbm12b2Q66JV4 834 aaKnown RBP25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Fgd5Q80UZ0 1219 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Farp2Q91VS8 1065 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Naa16Q9DBB4 864 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Actn2Q9JI91 894 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Atp10dQ8K2X1 1416 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Speer2E9Q9U2 264 aa25.77■■□□□ 1.72
Sh3rf1-201ENSMUST00000034060 Lrrc9Q8CDN9 1456 aa25.76■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Fam170aQ66LM6 333 aa25.76■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Bag2Q91YN9 210 aa25.76■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 ChmQ9QXG2 665 aa25.76■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Anks6Q6GQX6 883 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 B4galnt4Q766D5 1034 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ppp2r2cQ8BG02 447 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Uba5Q8VE47 403 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Exoc3Q6KAR6 755 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Gkap1Q9JMB0 366 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Skint5A7XUY5 1461 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Krt18P05784 423 aa25.75■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ctnna3Q65CL1 895 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 LdhaP06151 332 aaKnown RBP25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ccdc160Q3UYG1 323 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Rab34Q64008 259 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Rexo1Q7TT28 1213 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Snx25Q3ZT31 840 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Tpx2A2APB8 745 aaKnown RBP25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 NelfbQ8C4Y3 580 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Zscan18E9PUD6 809 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 PalldQ9ET54 1408 aa25.74■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Rsad2Q8CBB9 362 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Card14Q99KF0 999 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Stoml1Q8CI66 399 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 LgsnQ8CIX8 563 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Apbb1ipQ8R5A3 670 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Lrrc2Q8VDB8 371 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Stx17Q9D0I4 301 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 TnksQ6PFX9 1320 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Zfp781Q0P5U5 243 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ccdc174Q3U155 467 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Tekt2Q922G7 430 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Krt71Q9R0H5 524 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Bpifb4A2BGH0 617 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Serpinb1cQ5SV42 375 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Trerf1Q8BXJ2 1205 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 BC005561E9Q5E2 1589 aa25.73■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Chmp6P0C0A3 200 aa25.72■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Slc12a2P55012 1205 aa25.72■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Tsr1Q5SWD9 803 aa25.72■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Klhl7Q8BUL5 586 aa25.72■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Appbp2Q9DAX9 585 aa25.72■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 PtprgQ05909 1442 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Prl3d3A0A0M6L0J6 224 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Krt20Q9D312 431 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Prl3d2F6R3P9 224 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Actn3O88990 900 aaKnown RBP25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 GnpatP98192 678 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ufl1Q8CCJ3 793 aaKnown RBP25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ddx41Q91VN6 622 aaKnown RBP25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Vps54Q5SPW0 977 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Camsap3Q80VC9 1252 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Capn12Q9ER56 720 aa25.71■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Skor2A7M7C7 1008 aa25.7■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ctnna1P26231 906 aaKnown RBP25.7■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Wdr62Q3U3T8 1523 aa25.7■■□□□ 1.71
Sh3rf1-201ENSMUST00000034060 Ncoa3O09000 1398 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Tcp1P11983 556 aaKnown RBP25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Ccdc110Q3V125 848 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Abtb2Q7TQI7 1024 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Atg4a-psA0A0G2JFS9 396 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Svs3aF2Z472 265 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Myl3P09542 204 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Lrriq3Q14DL3 633 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Atg4aQ8C9S8 396 aa25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Sept11Q8C1B7 431 aaKnown RBP25.7■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Rad23aP54726 363 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Morc2aQ69ZX6 1030 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Dzip1Q8BMD2 852 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Osbpl1aQ91XL9 950 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 St5Q924W7 1134 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Ptcd1Q8C2E4 695 aaKnown RBP25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Bbs5Q9CZQ9 341 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Prr16A3KMN5 304 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Krt90E9Q1Z0 538 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Pla2g4fQ50L41 855 aa25.69■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Proca1B0QZF7 307 aa25.68■■□□□ 1.7
Sh3rf1-201ENSMUST00000034060 Ccdc175E9PVB3 822 aa25.68■■□□□ 1.7
Retrieved 100 of 22,080 RNA–protein pairs in 9.8 ms