RNA–Protein interactions for RNA: ENSMUST00000029222.7

Ccdc39-201, Transcript of Coiled-coil domain-containing protein 39, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ccdc39, Length 3,606 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc39-201ENSMUST00000029222 Carmil3Q3UFQ8 1375 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Wdr33Q8K4P0 1330 aaKnown RBP9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Lbhd1A0A087WPA0 259 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Zscan29E9Q5B4 869 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 TrdnE9Q9K5 693 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Tmem59lQ7TNI2 337 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Sec62Q8BU14 398 aaKnown RBP9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ubxn4Q8VCH8 506 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cd248Q91V98 765 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Hip1rQ9JKY5 1068 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Acot9Q9R0X4 439 aaKnown RBP9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 IkQ9Z1M8 557 aaKnown RBP9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Mrc1Q61830 1456 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Siah1aP61092 282 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Sptlc2P97363 560 aaKnown RBP9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Znf667Q2TL60 609 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ctr9Q62018 1173 aaKnown RBP9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Fam196bQ6GQV1 535 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Smc2Q8CG48 1191 aaKnown RBP9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Rcan3Q9JKK0 239 aa9.04□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cfap73J3QPZ5 306 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Slc44a1Q6X893 653 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 QarsQ8BML9 775 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Pus7lQ8CE46 702 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Trim29Q8R2Q0 587 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 HibadhQ99L13 335 aaKnown RBP9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Clic4Q9QYB1 253 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 FocadA2AKG8 1798 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Myh1Q5SX40 1942 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Gm3893E9Q1I1 302 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Kif3aP28741 701 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Hmgb2P30681 210 aaKnown RBP9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Aak1Q3UHJ0 959 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Ncbp1Q3UYV9 790 aaKnown RBP9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Usp28Q5I043 1051 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Atp2b4Q6Q477 1205 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Zscan22Q8BGS5 496 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Slc4a8Q8JZR6 1089 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Xrcc4Q924T3 326 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Cnpy3Q9DAU1 276 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Bnip3O55003 187 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Copb2O55029 905 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Spata18Q0P557 537 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Gpatch11Q3UFS4 262 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Il17raQ60943 864 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 B4galnt4Q766D5 1034 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 SnrkQ8VDU5 748 aa9.03□□□□□ -0.96
Ccdc39-201ENSMUST00000029222 Frmd7A2AD83 703 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ranbp6Q8BIV3 1105 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Col20a1Q923P0 1320 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 BcorQ8CGN4 1759 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ezh2Q61188 746 aaKnown RBP9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Isy1Q69ZQ2 285 aaKnown RBP9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ift74Q8BKE9 600 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Hps6Q8BLY7 805 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gimap7Q8R379 293 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Trim11Q99PQ2 467 aa9.02□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ano3A2AHL1 981 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Casp12O08736 419 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Rgs9O54828 675 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 DnttP09838 530 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Eya3P97480 510 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gja5Q01231 358 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Llgl2Q3TJ91 1027 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Q3TYL0 343 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ift122Q6NWV3 1182 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Shisa4Q8CA71 197 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Sept14Q9DA97 430 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Olfr247E9PVJ7 320 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Olfr819K7N727 320 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Grem2O88273 168 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 MycnP03966 462 aaKnown RBP9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ncf1Q09014 390 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Znf697Q569E7 569 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cyp2c67Q569X9 491 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 AsnsQ61024 561 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cep120Q7TSG1 988 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Tbc1d23Q8K0F1 684 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Col4a3bpQ9EQG9 624 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Atp8b3Q6UQ17 1335 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Usp25P57080 1055 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Gtf3c3Q3TMP1 882 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Stk39Q9Z1W9 556 aa9.01□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 EvplQ9D952 2035 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ubr2Q6WKZ8 1755 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 1700113H08RikE9Q9Q5 327 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Tyro3P55144 880 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Fam178bQ24JP3 464 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Madcam1Q61826 405 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Smarcc2Q6PDG5 1213 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cdca7Q9D0M2 382 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Cypt2Q6P924 180 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Hps3Q91VB4 1002 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Ndufv1Q91YT0 464 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Golgb1E9PVZ8 3238 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Oxr1Q4KMM3 866 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Slc27a1Q60714 646 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Rrp12Q6P5B0 1295 aaKnown RBP9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Fnbp4Q6ZQ03 1031 aa9□□□□□ -0.97
Ccdc39-201ENSMUST00000029222 Nod2Q8K3Z0 1020 aa9□□□□□ -0.97
Retrieved 100 of 22,080 RNA–protein pairs in 20.4 ms