RNA–Protein interactions for RNA: ENSMUST00000022220.12

Msh3-201, Transcript of DNA mismatch repair protein Msh3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Msh3, Length 3,937 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Msh3-201ENSMUST00000022220 Kif3cO35066 796 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Clec11aO88200 328 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Pim2Q62070 370 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ncaph2Q8BSP2 607 aa12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 Smc1aQ9CU62 1233 aaKnown RBP12.36□□□□□ -0.43
Msh3-201ENSMUST00000022220 AK157302I3ITR1 129 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Tuft1O08970 390 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cyp26a1O55127 497 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Jakmip3Q5DTN8 844 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Adck5Q80V03 582 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Phf20l1Q8CCJ9 1013 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Isca1Q9D924 129 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Atp1a4Q9WV27 1032 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gm13023A2A8N2 498 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Trim30cD3YVI9 513 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Cyp3a57D3YYZ0 503 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 1700113H08RikE9Q9Q5 327 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Lnx1O70263 728 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gnat2P50149 354 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Pex1Q5BL07 1284 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Nlrp9bQ66X22 1003 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Bmp2kQ91Z96 1138 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Baiap2l1Q9DBJ3 514 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Gcom1E9PZ54 550 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Api5O35841 504 aaKnown RBP12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 GmnnO88513 206 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 MyzapQ3UIJ9 466 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Nat10Q8K224 1024 aaKnown RBP12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Adarb2Q9JI20 745 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ubn2Q80WC1 1314 aa12.35□□□□□ -0.43
Msh3-201ENSMUST00000022220 Kiaa0319Q5SZV5 1081 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ube2oQ6ZPJ3 1288 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Fam177a1Q8BR63 207 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Znf131Q8K3J5 619 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Xpo4Q9ESJ0 1151 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Flt4P35917 1363 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Abca14E9Q8F8 1683 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 DnmbpQ6TXD4 1580 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Nap1l1P28656 391 aaKnown RBP12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Q8BZJ8 459 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Mb21d2Q8C525 428 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ccdc12Q8R344 166 aaKnown RBP12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ica1lQ3TY65 431 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Tmem131lQ3U3D7 1597 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Rims2Q9EQZ7 1530 aa12.34□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ccdc121E9Q6D3 323 aa12.33□□□□□ -0.43
Msh3-201ENSMUST00000022220 Atp2b1G5E829 1220 aa12.33□□□□□ -0.43
Msh3-201ENSMUST00000022220 Lins1Q3U1D0 764 aa12.33□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ccdc57Q6PHN1 1016 aa12.33□□□□□ -0.43
Msh3-201ENSMUST00000022220 Zswim4Q8C7B8 1101 aa12.33□□□□□ -0.43
Msh3-201ENSMUST00000022220 Plagl1Q9JLQ4 704 aa12.33□□□□□ -0.43
Msh3-201ENSMUST00000022220 Suclg2Q9Z2I8 433 aa12.33□□□□□ -0.43
Msh3-201ENSMUST00000022220 Ube4aE9Q735 1028 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Capn2O08529 700 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 VrtnQ3SYK4 740 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Rbm15bQ6PHZ5 887 aaKnown RBP12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Zfp113Q8C689 439 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Gdap1l1Q8VE33 370 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Akt1s1Q9D1F4 257 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Pik3c2bE9QAN8 1632 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ampd3O08739 766 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Usp53P15975 1069 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tlr8P58682 1032 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Oxr1Q4KMM3 866 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ankrd40Q5SUE8 363 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Abcf1Q6P542 837 aaKnown RBP12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tacc1Q6Y685 774 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Uba5Q8VE47 403 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tlcd1Q99JT6 247 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Vps33aQ9D2N9 598 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 EcsitQ9QZH6 435 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Mroh6V9GX81 722 aa12.33□□□□□ -0.44
Msh3-201ENSMUST00000022220 Kansl3A2RSY1 903 aaKnown RBP12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Atg9aQ68FE2 551 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Atp1a2Q6PIE5 1020 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Q8C6G1 249 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Pcdhb15Q91Y04 786 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Krt23Q99PS0 422 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Q9D5Q8 446 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Cdca8Q8BHX3 289 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Amigo3Q8C2S7 508 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Eaf2Q91ZD6 262 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 FliiQ9JJ28 1271 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Pde11aP0C1Q2 933 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ms4a2P20490 235 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 GabrdP22933 449 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Abcd1P48410 736 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Tbc1d2bQ3U0J8 965 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Madcam1Q61826 405 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Etf1Q8BWY3 437 aaKnown RBP12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Nod2Q8K3Z0 1020 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 ChmQ9QXG2 665 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Npc1l1Q6T3U4 1333 aa12.32□□□□□ -0.44
Msh3-201ENSMUST00000022220 Copb2O55029 905 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 1700013D24RikQ0P521 120 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Cep112Q5PR68 954 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Smarcc2Q6PDG5 1213 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 LarsQ8BMJ2 1178 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Dnm3Q8BZ98 863 aa12.31□□□□□ -0.44
Msh3-201ENSMUST00000022220 Ciao1Q99KN2 339 aa12.31□□□□□ -0.44
Retrieved 100 of 22,080 RNA–protein pairs in 8.7 ms