RNA–Protein interactions for RNA: ENSMUST00000003645.8

Ercc1-201, Transcript of DNA excision repair protein ERCC-1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ercc1, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc1-201ENSMUST00000003645 Cypt1Q8CH20 168 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Shtn1Q8K2Q9 631 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Krt84Q99M73 603 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Ccdc7Q9D541 371 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Q9D9S1 216 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Zbtb43Q9DAI4 467 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Cyp27a1Q9DBG1 533 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Dpp7Q9ET22 506 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Col24a1Q30D77 1733 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Gm29094F6Q785 221 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Znf667Q2TL60 609 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Stk11ipQ3TAA7 1072 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Cnnm2Q3TWN3 875 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Oog3Q3UWY1 500 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Gm21985Q6P6P5 1106 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Efcc1Q9JJF6 558 aa17.4■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Med23Q80YQ2 1367 aa17.39■□□□□ 0.38
Ercc1-201ENSMUST00000003645 AfdnQ9QZQ1 1820 aaKnown RBP17.39■□□□□ 0.38
Ercc1-201ENSMUST00000003645 Myh6Q02566 1938 aaKnown RBP17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Prss51A0A286YDY8 319 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Ano3A2AHL1 981 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Abl1P00520 1123 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Myo1bP46735 1107 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 EvcP57680 1005 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Pkp1P97350 728 aaKnown RBP17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Irf6P97431 467 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Ints3Q7TPD0 1041 aaKnown RBP17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Lman1lQ8VCD3 505 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Kdm4cQ8VCD7 1054 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Dynll2Q9D0M5 89 aa17.39■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Plekhg2Q6KAU7 1340 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 1700003F12RikA2AKE5 210 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Lipo1J3QME6 396 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Vmn2r68L7N2B3 851 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Znf326O88291 580 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Slc27a3O88561 667 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Tnni2P13412 182 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 CenpbP27790 599 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 PcQ05920 1178 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Aak1Q3UHJ0 959 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Slc44a1Q6X893 653 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Tmc4Q7TQ65 694 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 PaoxQ8C0L6 504 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Tceanc2Q8R2M0 207 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Ndufv1Q91YT0 464 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Gbp7Q91Z40 638 aa17.38■□□□□ 0.37
Ercc1-201ENSMUST00000003645 1700006A11RikB9EHI3 544 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Il7P10168 154 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 LeprP48356 1162 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 VrtnQ3SYK4 740 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 MyrflQ3UN70 904 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Cep131Q62036 1060 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Fam170aQ66LM6 333 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Sez6lQ6P1D5 963 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Ncaph2Q8BSP2 607 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Odf2lQ9D478 642 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Sil1Q9EPK6 465 aa17.37■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Tcof1O08784 1320 aaKnown RBP17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Cchcr1Q8K2I2 770 aa17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Cdk8Q8R3L8 464 aa17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Atxn7Q8R4I1 867 aa17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Mrpl50Q8VDT9 159 aaKnown RBP17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Gpr108Q91WD0 569 aa17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Rufy3Q9D394 469 aa17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Bcorl1A2AQH4 1781 aa17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Lamb1P02469 1786 aa17.36■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Rgs12Q8CGE9 1381 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Pappa2E9PZ87 1789 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Gm36210A0A1B0GS00 229 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 F2rP30558 430 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Klrg2Q3UM83 387 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Tbc1d9bQ5SVR0 1263 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Scaf8Q6DID3 1268 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Col2a1P28481 1487 aa17.35■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Nova2D3YVV7 556 aaKnown RBP17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Vwa3bJ9JI28 736 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Slc1a4O35874 532 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Smarce1O54941 411 aaKnown RBP17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Tmprss11eQ5S248 423 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Cep55Q8BT07 462 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Fsd2Q8BZ52 692 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Dnai1Q8C0M8 701 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 KinQ8K339 391 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Klrc1Q9Z202 244 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Myh2G3UW82 1942 aa17.34■□□□□ 0.37
Ercc1-201ENSMUST00000003645 Pde6aP27664 859 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Lgr6Q3UVD5 967 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Prdm1Q60636 856 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 KhnynQ80U38 671 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Tmem39bQ810L4 492 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 QarsQ8BML9 775 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Styxl1Q9DAR2 321 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Ltbp2O08999 1813 aa17.33■□□□□ 0.36
Ercc1-201ENSMUST00000003645 ArxO35085 564 aa17.32■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Mei1Q9D4I2 1268 aa17.32■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Tjap1Q9DCD5 539 aa17.32■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Dock5B2RY04 1868 aa17.32■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Tspoap1Q7TNF8 1846 aa17.32■□□□□ 0.36
Ercc1-201ENSMUST00000003645 A0A1W2P6Q8 802 aa17.31■□□□□ 0.36
Ercc1-201ENSMUST00000003645 Gm9048A0A1W2P7H4 802 aa17.31■□□□□ 0.36
Retrieved 100 of 22,080 RNA–protein pairs in 46.5 ms