RNA–Protein interactions for RNA: tP(UGG)A

TRN1, Transcript of Proline tRNA (tRNA-Pro), predicted by tRNAscan-SE analysis, yeastyeast

Gene TRN1, Length 72 nt, Biotype tRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRN1tP(UGG)A NUP159P40477 1460 aa24.38■■□□□ 1.49
TRN1tP(UGG)A SAS10Q12136 610 aaPredicted RBP24.35■■□□□ 1.49
TRN1tP(UGG)A YRF1-1P0CX20 1796 aa24.32■■□□□ 1.48
TRN1tP(UGG)A YRF1-5P0CX21 1796 aa24.32■■□□□ 1.48
TRN1tP(UGG)A YRF1-8P0CX22 1796 aa24.32■■□□□ 1.48
TRN1tP(UGG)A STH1P32597 1359 aa24.3■■□□□ 1.48
TRN1tP(UGG)A ULS1Q08562 1619 aa24.26■■□□□ 1.47
TRN1tP(UGG)A PDR15Q04182 1529 aaKnown RBP24.24■■□□□ 1.47
TRN1tP(UGG)A SNT2P53127 1403 aa24.23■■□□□ 1.47
TRN1tP(UGG)A LTE1P07866 1435 aa24.13■■□□□ 1.45
TRN1tP(UGG)A VPS15P22219 1454 aa24.12■■□□□ 1.45
TRN1tP(UGG)A TAF7Q05021 590 aa24.07■■□□□ 1.44
TRN1tP(UGG)A GEA2P39993 1459 aaKnown RBP24.04■■□□□ 1.44
TRN1tP(UGG)A RTT106P40161 455 aa23.99■■□□□ 1.43
TRN1tP(UGG)A SPO14P36126 1683 aa23.95■■□□□ 1.42
TRN1tP(UGG)A IRC20Q06554 1556 aa23.93■■□□□ 1.42
TRN1tP(UGG)A IFH1P39520 1085 aa23.9■■□□□ 1.42
TRN1tP(UGG)A PDR12Q02785 1511 aa23.87■■□□□ 1.41
TRN1tP(UGG)A GEA1P47102 1408 aaPredicted RBP23.85■■□□□ 1.41
TRN1tP(UGG)A MET10P39692 1035 aa23.84■■□□□ 1.41
TRN1tP(UGG)A GDB1Q06625 1536 aa23.8■■□□□ 1.4
TRN1tP(UGG)A BNI1P41832 1953 aa23.8■■□□□ 1.4
TRN1tP(UGG)A TY3B-GQ99315 1547 aa23.74■■□□□ 1.39
TRN1tP(UGG)A NUP170P38181 1502 aa23.73■■□□□ 1.39
TRN1tP(UGG)A YBT1P32386 1661 aa23.73■■□□□ 1.39
TRN1tP(UGG)A DRS2P39524 1355 aa23.69■■□□□ 1.38
TRN1tP(UGG)A NUP157P40064 1391 aaKnown RBP23.68■■□□□ 1.38
TRN1tP(UGG)A PDR10P51533 1564 aa23.65■■□□□ 1.38
TRN1tP(UGG)A ITT1Q04638 464 aa23.63■■□□□ 1.37
TRN1tP(UGG)A CAT8P39113 1433 aa23.6■■□□□ 1.37
TRN1tP(UGG)A IQG1Q12280 1495 aa23.57■■□□□ 1.36
TRN1tP(UGG)A ARO1P08566 1588 aaKnown RBP23.48■■□□□ 1.35
TRN1tP(UGG)A BUD3P25558 1636 aa23.47■■□□□ 1.35
TRN1tP(UGG)A DOP1Q03921 1698 aa23.47■■□□□ 1.35
TRN1tP(UGG)A MMS1Q06211 1407 aa23.45■■□□□ 1.34
TRN1tP(UGG)A TRM3Q07527 1436 aa23.37■■□□□ 1.33
TRN1tP(UGG)A CHC1P22137 1653 aaKnown RBP23.29■■□□□ 1.32
TRN1tP(UGG)A CKB1P43639 278 aa23.28■■□□□ 1.32
TRN1tP(UGG)A IKI3Q06706 1349 aaKnown RBP23.25■■□□□ 1.31
TRN1tP(UGG)A DNF2Q12675 1612 aa23.25■■□□□ 1.31
TRN1tP(UGG)A SEC7P11075 2009 aaKnown RBP23.23■■□□□ 1.31
TRN1tP(UGG)A YSP2Q06681 1438 aa23.21■■□□□ 1.31
TRN1tP(UGG)A SRB8P25648 1427 aa23.17■■□□□ 1.3
TRN1tP(UGG)A BNR1P40450 1375 aa23.06■■□□□ 1.28
TRN1tP(UGG)A SSM4P40318 1319 aa23.03■■□□□ 1.28
TRN1tP(UGG)A ABP1P15891 592 aaKnown RBP22.97■■□□□ 1.27
TRN1tP(UGG)A YOR093CQ12275 1648 aa22.89■■□□□ 1.25
TRN1tP(UGG)A BUD21Q08492 214 aaPredicted RBP22.86■■□□□ 1.25
TRN1tP(UGG)A GCN2P15442 1659 aa22.71■■□□□ 1.23
TRN1tP(UGG)A NUP188P52593 1655 aaKnown RBP22.68■■□□□ 1.22
TRN1tP(UGG)A MIF2P35201 549 aa22.67■■□□□ 1.22
TRN1tP(UGG)A DNF3Q12674 1656 aa22.66■■□□□ 1.22
TRN1tP(UGG)A VMR1P38735 1592 aa22.63■■□□□ 1.21
TRN1tP(UGG)A YAP3P38749 330 aa22.55■■□□□ 1.2
TRN1tP(UGG)A PDR5P33302 1511 aaKnown RBP22.52■■□□□ 1.19
TRN1tP(UGG)A URN1Q06525 465 aaKnown RBP22.51■■□□□ 1.19
TRN1tP(UGG)A IML1P47170 1584 aa22.49■■□□□ 1.19
TRN1tP(UGG)A IPL1P38991 367 aa22.37■■□□□ 1.17
TRN1tP(UGG)A TYS1P36421 394 aaKnown RBP22.31■■□□□ 1.16
TRN1tP(UGG)A PDR11P40550 1411 aa22.3■■□□□ 1.16
TRN1tP(UGG)A HAP1P0CE41 1502 aa22.25■■□□□ 1.15
TRN1tP(UGG)A PAF1P38351 445 aa22.2■■□□□ 1.14
TRN1tP(UGG)A MAK10Q02197 733 aa22.19■■□□□ 1.14
TRN1tP(UGG)A USO1P25386 1790 aa22.17■■□□□ 1.14
TRN1tP(UGG)A RAV1P47104 1357 aa22.12■■□□□ 1.13
TRN1tP(UGG)A NOP7P53261 605 aaKnown RBP22.12■■□□□ 1.13
TRN1tP(UGG)A BFR2Q06631 534 aaKnown RBP22.07■■□□□ 1.12
TRN1tP(UGG)A YFR006WP43590 535 aa22■■□□□ 1.11
TRN1tP(UGG)A NUP192P47054 1683 aa21.98■■□□□ 1.11
TRN1tP(UGG)A RTC1Q08281 1341 aa21.98■■□□□ 1.11
TRN1tP(UGG)A TY1B-NL2Q99337 1749 aaKnown RBP21.96■■□□□ 1.11
TRN1tP(UGG)A BCK1Q01389 1478 aa21.85■■□□□ 1.09
TRN1tP(UGG)A KRE5P22023 1365 aa21.82■■□□□ 1.08
TRN1tP(UGG)A MRX12P47084 519 aa21.76■■□□□ 1.07
TRN1tP(UGG)A RAD9P14737 1309 aa21.76■■□□□ 1.07
TRN1tP(UGG)A RIA1P53893 1110 aa21.72■■□□□ 1.07
TRN1tP(UGG)A CFT1Q06632 1357 aaKnown RBP21.72■■□□□ 1.07
TRN1tP(UGG)A TAF5P38129 798 aa21.71■■□□□ 1.07
TRN1tP(UGG)A ALD4P46367 519 aaKnown RBP21.7■■□□□ 1.06
TRN1tP(UGG)A CAB1Q04430 367 aa21.7■■□□□ 1.06
TRN1tP(UGG)A YMR196WQ04336 1088 aa21.69■■□□□ 1.06
TRN1tP(UGG)A ESL2P36168 1195 aa21.66■■□□□ 1.06
TRN1tP(UGG)A THI12P42883 340 aa21.64■■□□□ 1.05
TRN1tP(UGG)A THI5P43534 340 aa21.64■■□□□ 1.05
TRN1tP(UGG)A THI11P47183 340 aa21.64■■□□□ 1.05
TRN1tP(UGG)A THI13Q07748 340 aa21.64■■□□□ 1.05
TRN1tP(UGG)A TY3B-IQ7LHG5 1498 aaKnown RBP21.56■■□□□ 1.04
TRN1tP(UGG)A YNR029CP53729 429 aaKnown RBP21.54■■□□□ 1.04
TRN1tP(UGG)A TAF8Q03750 510 aa21.53■■□□□ 1.04
TRN1tP(UGG)A NAP1P25293 417 aaKnown RBP21.5■■□□□ 1.03
TRN1tP(UGG)A KIP3P53086 805 aaKnown RBP21.46■■□□□ 1.03
TRN1tP(UGG)A ORC1P54784 914 aaPredicted RBP21.46■■□□□ 1.03
TRN1tP(UGG)A YLR419WQ06698 1435 aaKnown RBP21.4■■□□□ 1.02
TRN1tP(UGG)A SPE2P21182 396 aa21.38■■□□□ 1.01
TRN1tP(UGG)A POL5P39985 1022 aaKnown RBP21.32■■□□□ 1
TRN1tP(UGG)A RCM1P53972 490 aa21.3■■□□□ 1
TRN1tP(UGG)A CPS1P27614 576 aa21.21■□□□□ 0.99
TRN1tP(UGG)A PPH3P32345 308 aa21.2■□□□□ 0.98
TRN1tP(UGG)A TY4B-HP0C2J7 1802 aa21.17■□□□□ 0.98
TRN1tP(UGG)A TY4B-JP47024 1803 aa21.17■□□□□ 0.98
Retrieved 100 of 5,963 RNA–protein pairs in 8.2 ms