RNA–Protein interactions for RNA: snR55

snR55, Transcript of C/D box small nucleolar RNA (snoRNA), yeastyeast

Gene snR55, Length 98 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
snR55snR55 YEL023CP39992 682 aa5.89□□□□□ -1.47
snR55snR55 PTC4P38089 393 aa5.88□□□□□ -1.47
snR55snR55 BCK2P33306 851 aa5.87□□□□□ -1.47
snR55snR55 CHL1P22516 861 aaPredicted RBP5.86□□□□□ -1.47
snR55snR55 PRE3P38624 215 aa5.86□□□□□ -1.47
snR55snR55 YDR344CQ05510 147 aa5.85□□□□□ -1.47
snR55snR55 RAM2P29703 316 aa5.8□□□□□ -1.48
snR55snR55 EDS1P38073 919 aa5.8□□□□□ -1.48
snR55snR55 GRE2Q12068 342 aaKnown RBP5.8□□□□□ -1.48
snR55snR55 MAK11P20484 414 aaKnown RBP5.78□□□□□ -1.48
snR55snR55 NST1P53935 1240 aa5.78□□□□□ -1.48
snR55snR55 PML39Q03760 334 aa5.78□□□□□ -1.48
snR55snR55 PTC3P34221 468 aaKnown RBP5.77□□□□□ -1.49
snR55snR55 MIF2P35201 549 aa5.76□□□□□ -1.49
snR55snR55 GUT1P32190 709 aa5.75□□□□□ -1.49
snR55snR55 ATH1P48016 1211 aa5.74□□□□□ -1.49
snR55snR55 VRP1P37370 817 aa5.73□□□□□ -1.49
snR55snR55 SOL3P38858 249 aa5.73□□□□□ -1.49
snR55snR55 XDJ1P39102 459 aa5.72□□□□□ -1.49
snR55snR55 MID1P41821 548 aa5.72□□□□□ -1.49
snR55snR55 ELP4Q02884 456 aaKnown RBP5.71□□□□□ -1.5
snR55snR55 COQ8P27697 501 aa5.7□□□□□ -1.5
snR55snR55 ARH1P48360 493 aa5.7□□□□□ -1.5
snR55snR55 ILV3P39522 585 aaKnown RBP5.69□□□□□ -1.5
snR55snR55 MPH3P0CE00 602 aa5.67□□□□□ -1.5
snR55snR55 AI4P03878 556 aa5.66□□□□□ -1.5
snR55snR55 DPS1P04802 557 aaKnown RBP5.61□□□□□ -1.51
snR55snR55 SPT23P35210 1082 aa5.61□□□□□ -1.51
snR55snR55 PEX29Q03370 554 aa5.61□□□□□ -1.51
snR55snR55 HAP5Q02516 242 aa5.6□□□□□ -1.51
snR55snR55 YGR273CP53329 174 aa5.59□□□□□ -1.51
snR55snR55 BNI4P53858 892 aa5.58□□□□□ -1.52
snR55snR55 MPC54Q08550 464 aa5.58□□□□□ -1.52
snR55snR55 NOP53Q12080 455 aaKnown RBP5.57□□□□□ -1.52
snR55snR55 SRC1Q03707 834 aa5.56□□□□□ -1.52
snR55snR55 YML082WQ04533 649 aaKnown RBP5.55□□□□□ -1.52
snR55snR55 SLI15P38283 698 aa5.54□□□□□ -1.52
snR55snR55 PTC2P39966 464 aaKnown RBP5.52□□□□□ -1.53
snR55snR55 NMA111P53920 997 aa5.51□□□□□ -1.53
snR55snR55 YPR015CQ12531 247 aa5.5□□□□□ -1.53
snR55snR55 DPL1Q05567 589 aa5.49□□□□□ -1.53
snR55snR55 KEX1P09620 729 aa5.47□□□□□ -1.53
snR55snR55 RAM1P22007 431 aa5.47□□□□□ -1.53
snR55snR55 RAS1P01119 309 aa5.43□□□□□ -1.54
snR55snR55 CDC73Q06697 393 aa5.43□□□□□ -1.54
snR55snR55 YLR326WQ06170 240 aaKnown RBP5.41□□□□□ -1.54
snR55snR55 ISU2Q12056 156 aa5.41□□□□□ -1.54
snR55snR55 UBP14P38237 781 aaKnown RBP5.4□□□□□ -1.54
snR55snR55 PDR1P12383 1068 aa5.38□□□□□ -1.55
snR55snR55 SDH2P21801 266 aa5.38□□□□□ -1.55
snR55snR55 SET1P38827 1080 aaKnown RBP5.38□□□□□ -1.55
snR55snR55 PCS60P38137 543 aaKnown RBP RIP-Chip data5.37□□□□□ -1.55not detected
snR55snR55 RGA2Q06407 1009 aa5.37□□□□□ -1.55
snR55snR55 VHR2P40041 505 aa5.36□□□□□ -1.55
snR55snR55 AMS1P22855 1083 aa5.34□□□□□ -1.55
snR55snR55 RGA1P39083 1007 aa5.34□□□□□ -1.55
snR55snR55 GYP1Q08484 637 aa5.33□□□□□ -1.56
snR55snR55 RAD54P32863 898 aa5.32□□□□□ -1.56
snR55snR55 YDR090CQ03193 310 aa5.3□□□□□ -1.56
snR55snR55 TRK1P12685 1235 aa5.28□□□□□ -1.56
snR55snR55 SAS4Q04003 481 aa5.28□□□□□ -1.56
snR55snR55 GAP1P19145 602 aaPredicted RBP5.26□□□□□ -1.57
snR55snR55 BUD20Q08004 166 aaPredicted RBP5.26□□□□□ -1.57
snR55snR55 STR2P47164 639 aa5.25□□□□□ -1.57
snR55snR55 RPP1BP10622 106 aaKnown RBP5.23□□□□□ -1.57
snR55snR55 YRR1Q12172 810 aa5.23□□□□□ -1.57
snR55snR55 YEL077CQ3E7X8 1277 aa5.23□□□□□ -1.57
snR55snR55 ISM1P48526 1002 aa5.22□□□□□ -1.57
snR55snR55 PRT1P06103 763 aaKnown RBP5.21□□□□□ -1.58
snR55snR55 YPR148CQ06523 435 aa5.2□□□□□ -1.58
snR55snR55 MRF1P30775 413 aaPredicted RBP5.19□□□□□ -1.58
snR55snR55 NUD1P32336 851 aa5.19□□□□□ -1.58
snR55snR55 ORC6P38826 435 aa5.19□□□□□ -1.58
snR55snR55 CSC1Q06538 782 aa5.19□□□□□ -1.58
snR55snR55 TFB4Q12004 338 aa5.19□□□□□ -1.58
snR55snR55 KIC1P38692 1080 aa5.18□□□□□ -1.58
snR55snR55 IFH1P39520 1085 aa5.18□□□□□ -1.58
snR55snR55 PEX21P50091 288 aa5.18□□□□□ -1.58
snR55snR55 TY1A-DR4O74302 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-HP0C2I4 478 aaKnown RBP5.17□□□□□ -1.58
snR55snR55 TY1A-AP0CX57 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-PR1P0CX58 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-ORP0CX59 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-PR2P0CX60 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-DR5P0CX65 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-ER2P0CX66 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-GR3P0CX67 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-LR1P0CX68 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-MR2P0CX69 440 aa5.17□□□□□ -1.58
snR55snR55 CST6P40535 587 aa5.17□□□□□ -1.58
snR55snR55 REF2P42073 533 aaPredicted RBP5.17□□□□□ -1.58
snR55snR55 TY1A-JR2P47099 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-DR1Q03856 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-ML1Q04706 440 aaKnown RBP5.17□□□□□ -1.58
snR55snR55 TUM1Q08686 304 aaKnown RBP5.17□□□□□ -1.58
snR55snR55 TY1A-BRQ12217 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-NL2Q12470 440 aa5.17□□□□□ -1.58
snR55snR55 TY1A-GR2Q12485 440 aa5.17□□□□□ -1.58
snR55snR55 AIR1P40507 360 aaKnown RBP5.16□□□□□ -1.58
snR55snR55 CLA4P48562 842 aa5.16□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 20.8 ms