RNA–Protein interactions for RNA: YPR057W

BRR1, Transcript of snRNP protein component of spliceosomal snRNPs, yeastyeast

Gene BRR1, Length 1,026 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BRR1YPR057W TY1B-MR2Q04670 1755 aaKnown RBP13.88□□□□□ -0.19
BRR1YPR057W TY1B-LR1Q12088 1755 aaKnown RBP13.88□□□□□ -0.19
BRR1YPR057W TY1B-NL1Q12112 1755 aa13.88□□□□□ -0.19
BRR1YPR057W TY1B-GR1Q12141 1755 aa13.88□□□□□ -0.19
BRR1YPR057W TY1B-BLQ12490 1755 aa13.88□□□□□ -0.19
BRR1YPR057W IKI3Q06706 1349 aaKnown RBP13.83□□□□□ -0.2
BRR1YPR057W NUP159P40477 1460 aa13.82□□□□□ -0.2
BRR1YPR057W RTT106P40161 455 aa13.82□□□□□ -0.2
BRR1YPR057W MET5P47169 1442 aa13.81□□□□□ -0.2
BRR1YPR057W GEA2P39993 1459 aaKnown RBP13.8□□□□□ -0.2
BRR1YPR057W NTE1Q04958 1679 aa13.79□□□□□ -0.2
BRR1YPR057W RPO21P04050 1733 aaKnown RBP13.76□□□□□ -0.21
BRR1YPR057W TY3B-GQ99315 1547 aa13.72□□□□□ -0.21
BRR1YPR057W IRC20Q06554 1556 aa13.71□□□□□ -0.21
BRR1YPR057W VPS15P22219 1454 aa13.71□□□□□ -0.21
BRR1YPR057W NUP170P38181 1502 aa13.69□□□□□ -0.22
BRR1YPR057W MET10P39692 1035 aa13.69□□□□□ -0.22
BRR1YPR057W CAT8P39113 1433 aa13.68□□□□□ -0.22
BRR1YPR057W PDR12Q02785 1511 aa13.64□□□□□ -0.23
BRR1YPR057W SSM4P40318 1319 aa13.64□□□□□ -0.23
BRR1YPR057W YRF1-1P0CX20 1796 aa13.6□□□□□ -0.23
BRR1YPR057W YRF1-5P0CX21 1796 aa13.6□□□□□ -0.23
BRR1YPR057W YRF1-8P0CX22 1796 aa13.6□□□□□ -0.23
BRR1YPR057W NUP157P40064 1391 aaKnown RBP13.57□□□□□ -0.24
BRR1YPR057W PDR10P51533 1564 aa13.56□□□□□ -0.24
BRR1YPR057W YBT1P32386 1661 aa13.56□□□□□ -0.24
BRR1YPR057W GDB1Q06625 1536 aa13.54□□□□□ -0.24
BRR1YPR057W SPO14P36126 1683 aa13.53□□□□□ -0.24
BRR1YPR057W LTE1P07866 1435 aa13.49□□□□□ -0.25
BRR1YPR057W SRB8P25648 1427 aa13.48□□□□□ -0.25
BRR1YPR057W CKB1P43639 278 aa13.48□□□□□ -0.25
BRR1YPR057W ARO1P08566 1588 aaKnown RBP13.46□□□□□ -0.25
BRR1YPR057W IQG1Q12280 1495 aa13.42□□□□□ -0.26
BRR1YPR057W YSP2Q06681 1438 aa13.41□□□□□ -0.26
BRR1YPR057W BUD3P25558 1636 aa13.35□□□□□ -0.27
BRR1YPR057W MMS1Q06211 1407 aa13.35□□□□□ -0.27
BRR1YPR057W BUD21Q08492 214 aaPredicted RBP13.32□□□□□ -0.28
BRR1YPR057W DRS2P39524 1355 aa13.32□□□□□ -0.28
BRR1YPR057W BNR1P40450 1375 aa13.27□□□□□ -0.29
BRR1YPR057W TRM3Q07527 1436 aa13.25□□□□□ -0.29
BRR1YPR057W ITT1Q04638 464 aa13.24□□□□□ -0.29
BRR1YPR057W SEC7P11075 2009 aaKnown RBP13.17□□□□□ -0.3
BRR1YPR057W GCN2P15442 1659 aa13.15□□□□□ -0.3
BRR1YPR057W BNI1P41832 1953 aa13.15□□□□□ -0.3
BRR1YPR057W DOP1Q03921 1698 aa13.15□□□□□ -0.31
BRR1YPR057W CHC1P22137 1653 aaKnown RBP13.06□□□□□ -0.32
BRR1YPR057W NOP7P53261 605 aaKnown RBP13.04□□□□□ -0.32
BRR1YPR057W PAF1P38351 445 aa13.03□□□□□ -0.32
BRR1YPR057W PDR5P33302 1511 aaKnown RBP13.01□□□□□ -0.33
BRR1YPR057W YOR093CQ12275 1648 aa13.01□□□□□ -0.33
BRR1YPR057W BFR2Q06631 534 aaKnown RBP12.98□□□□□ -0.33
BRR1YPR057W PDR11P40550 1411 aa12.95□□□□□ -0.34
BRR1YPR057W VMR1P38735 1592 aa12.94□□□□□ -0.34
BRR1YPR057W URN1Q06525 465 aaKnown RBP12.94□□□□□ -0.34
BRR1YPR057W RAV1P47104 1357 aa12.94□□□□□ -0.34
BRR1YPR057W NUP188P52593 1655 aaKnown RBP12.93□□□□□ -0.34
BRR1YPR057W POL5P39985 1022 aaKnown RBP12.92□□□□□ -0.34
BRR1YPR057W DNF2Q12675 1612 aa12.91□□□□□ -0.34
BRR1YPR057W IML1P47170 1584 aa12.9□□□□□ -0.34
BRR1YPR057W RTC1Q08281 1341 aa12.89□□□□□ -0.35
BRR1YPR057W IPL1P38991 367 aa12.89□□□□□ -0.35
BRR1YPR057W YAP3P38749 330 aa12.87□□□□□ -0.35
BRR1YPR057W TYS1P36421 394 aaKnown RBP12.85□□□□□ -0.35
BRR1YPR057W ESL2P36168 1195 aa12.75□□□□□ -0.37
BRR1YPR057W TAF5P38129 798 aa12.74□□□□□ -0.37
BRR1YPR057W TY3B-IQ7LHG5 1498 aaKnown RBP12.73□□□□□ -0.37
BRR1YPR057W HAP1P0CE41 1502 aa12.72□□□□□ -0.37
BRR1YPR057W ABP1P15891 592 aaKnown RBP12.71□□□□□ -0.37
BRR1YPR057W ORC1P54784 914 aaPredicted RBP12.68□□□□□ -0.38
BRR1YPR057W NUP192P47054 1683 aa12.67□□□□□ -0.38
BRR1YPR057W ALD4P46367 519 aaKnown RBP12.65□□□□□ -0.38
BRR1YPR057W KIP3P53086 805 aaKnown RBP12.64□□□□□ -0.39
BRR1YPR057W MHP1P43638 1398 aa12.64□□□□□ -0.39
BRR1YPR057W DNF3Q12674 1656 aa12.63□□□□□ -0.39
BRR1YPR057W SEC3P33332 1336 aaKnown RBP12.62□□□□□ -0.39
BRR1YPR057W YLR419WQ06698 1435 aaKnown RBP12.62□□□□□ -0.39
BRR1YPR057W RAD9P14737 1309 aa12.62□□□□□ -0.39
BRR1YPR057W MAK10Q02197 733 aa12.6□□□□□ -0.39
BRR1YPR057W BCK1Q01389 1478 aa12.59□□□□□ -0.39
BRR1YPR057W SPE2P21182 396 aa12.58□□□□□ -0.4
BRR1YPR057W SCT1P32784 759 aa12.57□□□□□ -0.4
BRR1YPR057W TAF8Q03750 510 aa12.57□□□□□ -0.4
BRR1YPR057W CAB1Q04430 367 aa12.57□□□□□ -0.4
BRR1YPR057W SPT7P35177 1332 aa12.55□□□□□ -0.4
BRR1YPR057W NAP1P25293 417 aaKnown RBP12.53□□□□□ -0.4
BRR1YPR057W MRX12P47084 519 aa12.53□□□□□ -0.4
BRR1YPR057W KRE5P22023 1365 aa12.51□□□□□ -0.41
BRR1YPR057W PDS5Q04264 1277 aa12.5□□□□□ -0.41
BRR1YPR057W CFT1Q06632 1357 aaKnown RBP12.49□□□□□ -0.41
BRR1YPR057W NSR1P27476 414 aaKnown RBP RIP-Chip data12.48□□□□□ -0.41not detected
BRR1YPR057W ENP1P38333 483 aaKnown RBP12.48□□□□□ -0.41
BRR1YPR057W RIA1P53893 1110 aa12.47□□□□□ -0.41
BRR1YPR057W PSD2P53037 1138 aaKnown RBP12.45□□□□□ -0.42
BRR1YPR057W CHZ1P40019 153 aaPredicted RBP12.44□□□□□ -0.42
BRR1YPR057W FKH1P40466 484 aa12.38□□□□□ -0.43
BRR1YPR057W YNR029CP53729 429 aaKnown RBP12.38□□□□□ -0.43
BRR1YPR057W LEU3P08638 886 aa12.37□□□□□ -0.43
BRR1YPR057W RTG3P38165 486 aa12.36□□□□□ -0.43
BRR1YPR057W RCM1P53972 490 aa12.35□□□□□ -0.43
BRR1YPR057W PSK1P31374 1356 aa12.33□□□□□ -0.44
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms