RNA–Protein interactions for RNA: YPL254W

HFI1, Transcript of Adaptor protein required for structural integrity of the SAGA complex, yeastyeast

Gene HFI1, Length 1,467 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HFI1YPL254W EAP1P36041 632 aaKnown RBP9.44□□□□□ -0.9
HFI1YPL254W TIF11P38912 153 aaKnown RBP9.44□□□□□ -0.9
HFI1YPL254W PBS2P08018 668 aa9.42□□□□□ -0.9
HFI1YPL254W SOL3P38858 249 aa9.41□□□□□ -0.9
HFI1YPL254W ULI1P43604 169 aa9.41□□□□□ -0.9
HFI1YPL254W YGR273CP53329 174 aa9.41□□□□□ -0.9
HFI1YPL254W TRP5P00931 707 aaKnown RBP9.4□□□□□ -0.9
HFI1YPL254W VHR2P40041 505 aa9.4□□□□□ -0.91
HFI1YPL254W LEU3P08638 886 aa9.38□□□□□ -0.91
HFI1YPL254W YEL023CP39992 682 aa9.36□□□□□ -0.91
HFI1YPL254W UBP14P38237 781 aaKnown RBP9.35□□□□□ -0.91
HFI1YPL254W NST1P53935 1240 aa9.35□□□□□ -0.91
HFI1YPL254W DSF2P38213 736 aa9.34□□□□□ -0.91
HFI1YPL254W YLR326WQ06170 240 aaKnown RBP9.34□□□□□ -0.91
HFI1YPL254W IOC2Q12072 812 aa9.34□□□□□ -0.91
HFI1YPL254W KEX1P09620 729 aa9.31□□□□□ -0.92
HFI1YPL254W COX6P00427 148 aa9.3□□□□□ -0.92
HFI1YPL254W PTC4P38089 393 aa9.3□□□□□ -0.92
HFI1YPL254W MAK21Q12176 1025 aaKnown RBP9.3□□□□□ -0.92
HFI1YPL254W MAM3Q12296 706 aa9.3□□□□□ -0.92
HFI1YPL254W LDB19Q12502 818 aa9.3□□□□□ -0.92
HFI1YPL254W YDR090CQ03193 310 aa9.29□□□□□ -0.92
HFI1YPL254W MPH3P0CE00 602 aa9.28□□□□□ -0.92
HFI1YPL254W AI4P03878 556 aa9.28□□□□□ -0.92
HFI1YPL254W KIC1P38692 1080 aa9.28□□□□□ -0.92
HFI1YPL254W JIP4Q03361 876 aa9.28□□□□□ -0.92
HFI1YPL254W ILV3P39522 585 aaKnown RBP9.27□□□□□ -0.93
HFI1YPL254W RAD54P32863 898 aa9.26□□□□□ -0.93
HFI1YPL254W PCS60P38137 543 aaKnown RBP RIP-Chip data9.26□□□□□ -0.93not detected
HFI1YPL254W YNL035CP53962 389 aaKnown RBP9.25□□□□□ -0.93
HFI1YPL254W RTG1P32607 177 aa9.24□□□□□ -0.93
HFI1YPL254W IES2P40154 320 aa9.24□□□□□ -0.93
HFI1YPL254W DAN4P47179 1161 aa9.24□□□□□ -0.93
HFI1YPL254W LEO1P38439 464 aa9.22□□□□□ -0.93
HFI1YPL254W SGS1P35187 1447 aa9.18□□□□□ -0.94
HFI1YPL254W SEC61P32915 480 aa9.18□□□□□ -0.94
HFI1YPL254W DIT2P21595 489 aa9.17□□□□□ -0.94
HFI1YPL254W SLI15P38283 698 aa9.17□□□□□ -0.94
HFI1YPL254W RPN1P38764 993 aaKnown RBP9.17□□□□□ -0.94
HFI1YPL254W NUP42P49686 430 aaKnown RBP9.17□□□□□ -0.94
HFI1YPL254W PML39Q03760 334 aa9.15□□□□□ -0.94
HFI1YPL254W NCR1Q12200 1170 aa9.15□□□□□ -0.94
HFI1YPL254W SIS1P25294 352 aaKnown RBP9.15□□□□□ -0.95
HFI1YPL254W TFG1P41895 735 aaPredicted RBP9.14□□□□□ -0.95
HFI1YPL254W FKH1P40466 484 aa9.13□□□□□ -0.95
HFI1YPL254W MID1P41821 548 aa9.13□□□□□ -0.95
HFI1YPL254W YNR021WP53723 404 aaKnown RBP9.13□□□□□ -0.95
HFI1YPL254W GLC3P32775 704 aa9.09□□□□□ -0.95
HFI1YPL254W ORC6P38826 435 aa9.08□□□□□ -0.96
HFI1YPL254W CDC73Q06697 393 aa9.08□□□□□ -0.96
HFI1YPL254W AIR2Q12476 344 aaKnown RBP9.08□□□□□ -0.96
HFI1YPL254W YDL129WQ07555 291 aa9.06□□□□□ -0.96
HFI1YPL254W RPP1BP10622 106 aaKnown RBP9.05□□□□□ -0.96
HFI1YPL254W PEX29Q03370 554 aa9.05□□□□□ -0.96
HFI1YPL254W PSE1P32337 1089 aaKnown RBP9.03□□□□□ -0.96
HFI1YPL254W MPC54Q08550 464 aa9.03□□□□□ -0.96
HFI1YPL254W ATF2P53296 535 aa9.02□□□□□ -0.96
HFI1YPL254W SAP30P38429 201 aa9.02□□□□□ -0.97
HFI1YPL254W DPL1Q05567 589 aa9.02□□□□□ -0.97
HFI1YPL254W AIM7Q12156 149 aa9□□□□□ -0.97
HFI1YPL254W GAP1P19145 602 aaPredicted RBP8.99□□□□□ -0.97
HFI1YPL254W RGR1P19263 1082 aa8.99□□□□□ -0.97
HFI1YPL254W CSC1Q06538 782 aa8.99□□□□□ -0.97
HFI1YPL254W MVP1P40959 511 aaKnown RBP8.98□□□□□ -0.97
HFI1YPL254W KIN1P13185 1064 aa8.97□□□□□ -0.97
HFI1YPL254W YJL171CP46992 396 aa8.97□□□□□ -0.97
HFI1YPL254W PEX21P50091 288 aa8.97□□□□□ -0.97
HFI1YPL254W NMA111P53920 997 aa8.96□□□□□ -0.97
HFI1YPL254W BMT6Q12291 365 aa8.95□□□□□ -0.98
HFI1YPL254W TFB4Q12004 338 aa8.93□□□□□ -0.98
HFI1YPL254W ISU2Q12056 156 aa8.93□□□□□ -0.98
HFI1YPL254W TEA1P47988 759 aa8.92□□□□□ -0.98
HFI1YPL254W YDR344CQ05510 147 aa8.92□□□□□ -0.98
HFI1YPL254W YPR109WQ06104 294 aa8.92□□□□□ -0.98
HFI1YPL254W TUM1Q08686 304 aaKnown RBP8.92□□□□□ -0.98
HFI1YPL254W SPA2P23201 1466 aaKnown RBP8.91□□□□□ -0.98
HFI1YPL254W ARH1P48360 493 aa8.89□□□□□ -0.99
HFI1YPL254W HAP5Q02516 242 aa8.89□□□□□ -0.99
HFI1YPL254W SSN2P38931 1420 aa8.89□□□□□ -0.99
HFI1YPL254W ELP4Q02884 456 aaKnown RBP8.89□□□□□ -0.99
HFI1YPL254W YRR1Q12172 810 aa8.89□□□□□ -0.99
HFI1YPL254W CLB5P30283 435 aa8.88□□□□□ -0.99
HFI1YPL254W INO80P53115 1489 aa8.86□□□□□ -0.99
HFI1YPL254W PDR1P12383 1068 aa8.83□□□□□ -1
HFI1YPL254W PRE3P38624 215 aa8.81□□□□□ -1
HFI1YPL254W GUA1P38625 525 aaKnown RBP8.81□□□□□ -1
HFI1YPL254W NIS1P53939 407 aa8.81□□□□□ -1
HFI1YPL254W BNI4P53858 892 aa8.8□□□□□ -1
HFI1YPL254W SPT23P35210 1082 aa8.79□□□□□ -1
HFI1YPL254W DMA2P53924 522 aa8.78□□□□□ -1
HFI1YPL254W YMR196WQ04336 1088 aa8.77□□□□□ -1
HFI1YPL254W CHL1P22516 861 aaPredicted RBP8.77□□□□□ -1.01
HFI1YPL254W NUD1P32336 851 aa8.77□□□□□ -1.01
HFI1YPL254W CSN12P47130 423 aa8.77□□□□□ -1.01
HFI1YPL254W FPK1P53739 893 aa8.77□□□□□ -1.01
HFI1YPL254W PTC2P39966 464 aaKnown RBP8.76□□□□□ -1.01
HFI1YPL254W TYW1Q08960 810 aaKnown RBP8.76□□□□□ -1.01
HFI1YPL254W NPL4P33755 580 aa8.73□□□□□ -1.01
HFI1YPL254W SIT4P20604 311 aa8.72□□□□□ -1.01
HFI1YPL254W RAM1P22007 431 aa8.71□□□□□ -1.01
Retrieved 100 of 5,963 RNA–protein pairs in 18 ms