RNA–Protein interactions for RNA: YPL087W

YDC1, Transcript of Alkaline dihydroceramidase, involved in sphingolipid metabolism, yeastyeast

Gene YDC1, Length 954 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YDC1YPL087W SET4P42948 560 aa9.66□□□□□ -0.86
YDC1YPL087W ULI1P43604 169 aa9.64□□□□□ -0.87
YDC1YPL087W HTA1P04911 132 aaKnown RBP9.62□□□□□ -0.87
YDC1YPL087W HTA2P04912 132 aa9.62□□□□□ -0.87
YDC1YPL087W LDB19Q12502 818 aa9.62□□□□□ -0.87
YDC1YPL087W IOC2Q12072 812 aa9.59□□□□□ -0.87
YDC1YPL087W DCW1P36091 449 aa9.58□□□□□ -0.88
YDC1YPL087W SPB4P25808 606 aaPredicted RBP9.55□□□□□ -0.88
YDC1YPL087W REF2P42073 533 aaPredicted RBP9.55□□□□□ -0.88
YDC1YPL087W TRP5P00931 707 aaKnown RBP9.51□□□□□ -0.89
YDC1YPL087W MAK21Q12176 1025 aaKnown RBP9.51□□□□□ -0.89
YDC1YPL087W YGR273CP53329 174 aa9.5□□□□□ -0.89
YDC1YPL087W JIP4Q03361 876 aa9.5□□□□□ -0.89
YDC1YPL087W BMT6Q12291 365 aa9.5□□□□□ -0.89
YDC1YPL087W PBS2P08018 668 aa9.49□□□□□ -0.89
YDC1YPL087W LEU3P08638 886 aa9.48□□□□□ -0.89
YDC1YPL087W YEL023CP39992 682 aa9.48□□□□□ -0.89
YDC1YPL087W PTC4P38089 393 aa9.47□□□□□ -0.89
YDC1YPL087W RTG1P32607 177 aa9.44□□□□□ -0.9
YDC1YPL087W KIC1P38692 1080 aa9.44□□□□□ -0.9
YDC1YPL087W YNL035CP53962 389 aaKnown RBP9.44□□□□□ -0.9
YDC1YPL087W AI4P03878 556 aa9.43□□□□□ -0.9
YDC1YPL087W DSF2P38213 736 aa9.43□□□□□ -0.9
YDC1YPL087W VHR2P40041 505 aa9.42□□□□□ -0.9
YDC1YPL087W COX6P00427 148 aa9.41□□□□□ -0.9
YDC1YPL087W MPH3P0CE00 602 aa9.41□□□□□ -0.9
YDC1YPL087W SOL3P38858 249 aa9.41□□□□□ -0.9
YDC1YPL087W MAM3Q12296 706 aa9.4□□□□□ -0.9
YDC1YPL087W UBP14P38237 781 aaKnown RBP9.39□□□□□ -0.91
YDC1YPL087W TFG1P41895 735 aaPredicted RBP9.39□□□□□ -0.91
YDC1YPL087W YLR326WQ06170 240 aaKnown RBP9.39□□□□□ -0.91
YDC1YPL087W NCR1Q12200 1170 aa9.39□□□□□ -0.91
YDC1YPL087W KEX1P09620 729 aa9.38□□□□□ -0.91
YDC1YPL087W RAD54P32863 898 aa9.38□□□□□ -0.91
YDC1YPL087W SEC61P32915 480 aa9.38□□□□□ -0.91
YDC1YPL087W NST1P53935 1240 aa9.37□□□□□ -0.91
YDC1YPL087W DAN4P47179 1161 aa9.36□□□□□ -0.91
YDC1YPL087W RPP1BP10622 106 aaKnown RBP9.34□□□□□ -0.91
YDC1YPL087W YDR090CQ03193 310 aa9.31□□□□□ -0.92
YDC1YPL087W LEO1P38439 464 aa9.3□□□□□ -0.92
YDC1YPL087W PCS60P38137 543 aaKnown RBP RIP-Chip data9.29□□□□□ -0.92 RIP-Chip
YDC1YPL087W RPN1P38764 993 aaKnown RBP9.28□□□□□ -0.92
YDC1YPL087W IES2P40154 320 aa9.28□□□□□ -0.92
YDC1YPL087W ILV3P39522 585 aaKnown RBP9.25□□□□□ -0.93
YDC1YPL087W PML39Q03760 334 aa9.25□□□□□ -0.93
YDC1YPL087W SLI15P38283 698 aa9.24□□□□□ -0.93
YDC1YPL087W YDL129WQ07555 291 aa9.24□□□□□ -0.93
YDC1YPL087W YNR021WP53723 404 aaKnown RBP9.23□□□□□ -0.93
YDC1YPL087W PEX29Q03370 554 aa9.22□□□□□ -0.93
YDC1YPL087W NUP42P49686 430 aaKnown RBP9.19□□□□□ -0.94
YDC1YPL087W PSE1P32337 1089 aaKnown RBP9.18□□□□□ -0.94
YDC1YPL087W SAP30P38429 201 aa9.17□□□□□ -0.94
YDC1YPL087W CSC1Q06538 782 aa9.16□□□□□ -0.94
YDC1YPL087W DIT2P21595 489 aa9.15□□□□□ -0.94
YDC1YPL087W MID1P41821 548 aa9.15□□□□□ -0.94
YDC1YPL087W DPL1Q05567 589 aa9.15□□□□□ -0.94
YDC1YPL087W ORC6P38826 435 aa9.14□□□□□ -0.95
YDC1YPL087W PEX21P50091 288 aa9.14□□□□□ -0.95
YDC1YPL087W ATF2P53296 535 aa9.14□□□□□ -0.95
YDC1YPL087W AIM7Q12156 149 aa9.14□□□□□ -0.95
YDC1YPL087W MPC54Q08550 464 aa9.12□□□□□ -0.95
YDC1YPL087W TFB4Q12004 338 aa9.11□□□□□ -0.95
YDC1YPL087W CLB5P30283 435 aa9.1□□□□□ -0.95
YDC1YPL087W CDC73Q06697 393 aa9.1□□□□□ -0.95
YDC1YPL087W CHL1P22516 861 aaPredicted RBP9.09□□□□□ -0.95
YDC1YPL087W GLC3P32775 704 aa9.09□□□□□ -0.95
YDC1YPL087W ISU2Q12056 156 aa9.09□□□□□ -0.95
YDC1YPL087W GAP1P19145 602 aaPredicted RBP9.07□□□□□ -0.96
YDC1YPL087W MVP1P40959 511 aaKnown RBP9.06□□□□□ -0.96
YDC1YPL087W ARH1P48360 493 aa9.06□□□□□ -0.96
YDC1YPL087W NMA111P53920 997 aa9.06□□□□□ -0.96
YDC1YPL087W RGR1P19263 1082 aa9.05□□□□□ -0.96
YDC1YPL087W PRE3P38624 215 aa9.05□□□□□ -0.96
YDC1YPL087W HAP5Q02516 242 aa9.05□□□□□ -0.96
YDC1YPL087W BCK2P33306 851 aa9.04□□□□□ -0.96
YDC1YPL087W TEA1P47988 759 aa9.04□□□□□ -0.96
YDC1YPL087W ELP4Q02884 456 aaKnown RBP9.04□□□□□ -0.96
YDC1YPL087W KIN1P13185 1064 aa9.01□□□□□ -0.97
YDC1YPL087W TUM1Q08686 304 aaKnown RBP9□□□□□ -0.97
YDC1YPL087W YPR109WQ06104 294 aa8.99□□□□□ -0.97
YDC1YPL087W SPT23P35210 1082 aa8.98□□□□□ -0.97
YDC1YPL087W BNI4P53858 892 aa8.98□□□□□ -0.97
YDC1YPL087W YRR1Q12172 810 aa8.96□□□□□ -0.98
YDC1YPL087W PTC2P39966 464 aaKnown RBP8.93□□□□□ -0.98
YDC1YPL087W NPL4P33755 580 aa8.92□□□□□ -0.98
YDC1YPL087W HGH1P48362 394 aaKnown RBP8.92□□□□□ -0.98
YDC1YPL087W YMR196WQ04336 1088 aa8.91□□□□□ -0.98
YDC1YPL087W SSA2P10592 639 aaKnown RBP8.88□□□□□ -0.99
YDC1YPL087W NUD1P32336 851 aa8.86□□□□□ -0.99
YDC1YPL087W YML082WQ04533 649 aaKnown RBP8.86□□□□□ -0.99
YDC1YPL087W VRP1P37370 817 aa8.85□□□□□ -0.99
YDC1YPL087W YDR344CQ05510 147 aa8.85□□□□□ -0.99
YDC1YPL087W CSN12P47130 423 aa8.84□□□□□ -0.99
YDC1YPL087W RTF1P53064 558 aa8.84□□□□□ -0.99
YDC1YPL087W NIS1P53939 407 aa8.84□□□□□ -0.99
YDC1YPL087W PDR1P12383 1068 aa8.83□□□□□ -1
YDC1YPL087W XDJ1P39102 459 aa8.83□□□□□ -1
YDC1YPL087W GLN1P32288 370 aaKnown RBP8.82□□□□□ -1
YDC1YPL087W HST2P53686 357 aa8.82□□□□□ -1
YDC1YPL087W FPK1P53739 893 aa8.82□□□□□ -1
Retrieved 100 of 5,963 RNA–protein pairs in 7.5 ms