RNA–Protein interactions for RNA: YPL047W

SGF11, Transcript of Integral subunit of SAGA histone acetyltransferase complex, yeastyeast

Gene SGF11, Length 300 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGF11YPL047W BCK2P33306 851 aa5.05□□□□□ -1.6
SGF11YPL047W YEL023CP39992 682 aa5.04□□□□□ -1.6
SGF11YPL047W CHL1P22516 861 aaPredicted RBP5.03□□□□□ -1.6
SGF11YPL047W PTC4P38089 393 aa5.02□□□□□ -1.61
SGF11YPL047W PRE3P38624 215 aa5.02□□□□□ -1.61
SGF11YPL047W YDR344CQ05510 147 aa4.98□□□□□ -1.61
SGF11YPL047W PML39Q03760 334 aa4.95□□□□□ -1.62
SGF11YPL047W GRE2Q12068 342 aaKnown RBP4.95□□□□□ -1.62
SGF11YPL047W MIF2P35201 549 aa4.93□□□□□ -1.62
SGF11YPL047W VRP1P37370 817 aa4.93□□□□□ -1.62
SGF11YPL047W ELP4Q02884 456 aaKnown RBP4.92□□□□□ -1.62
SGF11YPL047W EDS1P38073 919 aa4.91□□□□□ -1.62
SGF11YPL047W XDJ1P39102 459 aa4.91□□□□□ -1.62
SGF11YPL047W ATH1P48016 1211 aa4.9□□□□□ -1.63
SGF11YPL047W RGA2Q06407 1009 aa4.9□□□□□ -1.63
SGF11YPL047W PTC3P34221 468 aaKnown RBP4.89□□□□□ -1.63
SGF11YPL047W MID1P41821 548 aa4.89□□□□□ -1.63
SGF11YPL047W MAK11P20484 414 aaKnown RBP4.88□□□□□ -1.63
SGF11YPL047W RAM2P29703 316 aa4.88□□□□□ -1.63
SGF11YPL047W GUT1P32190 709 aa4.88□□□□□ -1.63
SGF11YPL047W ARH1P48360 493 aa4.86□□□□□ -1.63
SGF11YPL047W NST1P53935 1240 aa4.86□□□□□ -1.63
SGF11YPL047W SOL3P38858 249 aa4.85□□□□□ -1.63
SGF11YPL047W DPS1P04802 557 aaKnown RBP4.84□□□□□ -1.63
SGF11YPL047W COQ8P27697 501 aa4.82□□□□□ -1.64
SGF11YPL047W PEX29Q03370 554 aa4.82□□□□□ -1.64
SGF11YPL047W AI4P03878 556 aa4.8□□□□□ -1.64
SGF11YPL047W MPH3P0CE00 602 aa4.8□□□□□ -1.64
SGF11YPL047W SPT23P35210 1082 aa4.8□□□□□ -1.64
SGF11YPL047W ILV3P39522 585 aaKnown RBP4.8□□□□□ -1.64
SGF11YPL047W HAP5Q02516 242 aa4.77□□□□□ -1.65
SGF11YPL047W YGR273CP53329 174 aa4.74□□□□□ -1.65
SGF11YPL047W BNI4P53858 892 aa4.74□□□□□ -1.65
SGF11YPL047W SRC1Q03707 834 aa4.74□□□□□ -1.65
SGF11YPL047W MPC54Q08550 464 aa4.74□□□□□ -1.65
SGF11YPL047W PTC2P39966 464 aaKnown RBP4.72□□□□□ -1.65
SGF11YPL047W YML082WQ04533 649 aaKnown RBP4.72□□□□□ -1.65
SGF11YPL047W RGA1P39083 1007 aa4.71□□□□□ -1.66
SGF11YPL047W SLI15P38283 698 aa4.7□□□□□ -1.66
SGF11YPL047W NMA111P53920 997 aa4.7□□□□□ -1.66
SGF11YPL047W DPL1Q05567 589 aa4.67□□□□□ -1.66
SGF11YPL047W NOP53Q12080 455 aaKnown RBP4.67□□□□□ -1.66
SGF11YPL047W YPR015CQ12531 247 aa4.66□□□□□ -1.66
SGF11YPL047W RAS1P01119 309 aa4.65□□□□□ -1.67
SGF11YPL047W KEX1P09620 729 aa4.62□□□□□ -1.67
SGF11YPL047W RAM1P22007 431 aa4.62□□□□□ -1.67
SGF11YPL047W CDC73Q06697 393 aa4.61□□□□□ -1.67
SGF11YPL047W ISU2Q12056 156 aa4.61□□□□□ -1.67
SGF11YPL047W PDR1P12383 1068 aa4.58□□□□□ -1.68
SGF11YPL047W GYP1Q08484 637 aa4.58□□□□□ -1.68
SGF11YPL047W AMS1P22855 1083 aa4.56□□□□□ -1.68
SGF11YPL047W UBP14P38237 781 aaKnown RBP4.56□□□□□ -1.68
SGF11YPL047W VHR2P40041 505 aa4.56□□□□□ -1.68
SGF11YPL047W YLR326WQ06170 240 aaKnown RBP4.56□□□□□ -1.68
SGF11YPL047W SDH2P21801 266 aa4.54□□□□□ -1.68
SGF11YPL047W TRK1P12685 1235 aa4.53□□□□□ -1.68
SGF11YPL047W PCS60P38137 543 aaKnown RBP RIP-Chip data4.53□□□□□ -1.68not detected
SGF11YPL047W SET1P38827 1080 aaKnown RBP4.53□□□□□ -1.68
SGF11YPL047W RAD54P32863 898 aa4.51□□□□□ -1.69
SGF11YPL047W SAS4Q04003 481 aa4.5□□□□□ -1.69
SGF11YPL047W YEL077CQ3E7X8 1277 aa4.48□□□□□ -1.69
SGF11YPL047W BUD20Q08004 166 aaPredicted RBP4.47□□□□□ -1.69
SGF11YPL047W RPP1BP10622 106 aaKnown RBP4.46□□□□□ -1.7
SGF11YPL047W YRR1Q12172 810 aa4.46□□□□□ -1.7
SGF11YPL047W YDR090CQ03193 310 aa4.45□□□□□ -1.7
SGF11YPL047W MRF1P30775 413 aaPredicted RBP4.44□□□□□ -1.7
SGF11YPL047W PRT1P06103 763 aaKnown RBP4.43□□□□□ -1.7
SGF11YPL047W STR2P47164 639 aa4.43□□□□□ -1.7
SGF11YPL047W ISM1P48526 1002 aa4.43□□□□□ -1.7
SGF11YPL047W PEX21P50091 288 aa4.43□□□□□ -1.7
SGF11YPL047W KIC1P38692 1080 aa4.42□□□□□ -1.7
SGF11YPL047W AIR1P40507 360 aaKnown RBP4.41□□□□□ -1.7
SGF11YPL047W TUM1Q08686 304 aaKnown RBP4.41□□□□□ -1.7
SGF11YPL047W GAP1P19145 602 aaPredicted RBP4.4□□□□□ -1.71
SGF11YPL047W NUD1P32336 851 aa4.4□□□□□ -1.71
SGF11YPL047W CLA4P48562 842 aa4.4□□□□□ -1.71
SGF11YPL047W ERG12P07277 443 aa4.39□□□□□ -1.71
SGF11YPL047W IFH1P39520 1085 aa4.39□□□□□ -1.71
SGF11YPL047W CST6P40535 587 aa4.39□□□□□ -1.71
SGF11YPL047W CSC1Q06538 782 aa4.39□□□□□ -1.71
SGF11YPL047W YPL062WQ02781 134 aa4.38□□□□□ -1.71
SGF11YPL047W TFB4Q12004 338 aa4.38□□□□□ -1.71
SGF11YPL047W BRE2P43132 505 aa4.37□□□□□ -1.71
SGF11YPL047W TY1A-DR4O74302 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-HP0C2I4 478 aaKnown RBP4.36□□□□□ -1.71
SGF11YPL047W TY1A-AP0CX57 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-PR1P0CX58 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-ORP0CX59 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-PR2P0CX60 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-DR5P0CX65 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-ER2P0CX66 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-GR3P0CX67 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-LR1P0CX68 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-MR2P0CX69 440 aa4.36□□□□□ -1.71
SGF11YPL047W SEC2P17065 759 aa4.36□□□□□ -1.71
SGF11YPL047W GCD11P32481 527 aaKnown RBP4.36□□□□□ -1.71
SGF11YPL047W TY1A-JR2P47099 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-DR1Q03856 440 aa4.36□□□□□ -1.71
SGF11YPL047W TY1A-ML1Q04706 440 aaKnown RBP4.36□□□□□ -1.71
SGF11YPL047W TY1A-BRQ12217 440 aa4.36□□□□□ -1.71
Retrieved 100 of 5,963 RNA–protein pairs in 14.5 ms