RNA–Protein interactions for RNA: YOR362C

PRE10, Transcript of Alpha 7 subunit of the 20S proteasome, yeastyeast

Gene PRE10, Length 867 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE10YOR362C RTT106P40161 455 aa11.69□□□□□ -0.54
PRE10YOR362C NUP159P40477 1460 aa11.67□□□□□ -0.54
PRE10YOR362C NTE1Q04958 1679 aa11.67□□□□□ -0.54
PRE10YOR362C SNT2P53127 1403 aa11.67□□□□□ -0.54
PRE10YOR362C MLP2P40457 1679 aa11.66□□□□□ -0.54
PRE10YOR362C PDR15Q04182 1529 aaKnown RBP11.64□□□□□ -0.55
PRE10YOR362C RPO21P04050 1733 aaKnown RBP11.63□□□□□ -0.55
PRE10YOR362C IFH1P39520 1085 aa11.61□□□□□ -0.55
PRE10YOR362C ULS1Q08562 1619 aa11.59□□□□□ -0.55
PRE10YOR362C GEA2P39993 1459 aaKnown RBP11.58□□□□□ -0.56
PRE10YOR362C MET10P39692 1035 aa11.56□□□□□ -0.56
PRE10YOR362C LTE1P07866 1435 aa11.54□□□□□ -0.56
PRE10YOR362C GEA1P47102 1408 aaPredicted RBP11.54□□□□□ -0.56
PRE10YOR362C VPS15P22219 1454 aa11.52□□□□□ -0.56
PRE10YOR362C YRF1-1P0CX20 1796 aa11.51□□□□□ -0.57
PRE10YOR362C YRF1-5P0CX21 1796 aa11.51□□□□□ -0.57
PRE10YOR362C YRF1-8P0CX22 1796 aa11.51□□□□□ -0.57
PRE10YOR362C PDR12Q02785 1511 aa11.46□□□□□ -0.57
PRE10YOR362C IRC20Q06554 1556 aa11.45□□□□□ -0.58
PRE10YOR362C CAT8P39113 1433 aa11.44□□□□□ -0.58
PRE10YOR362C NUP157P40064 1391 aaKnown RBP11.41□□□□□ -0.58
PRE10YOR362C SPO14P36126 1683 aa11.4□□□□□ -0.58
PRE10YOR362C GDB1Q06625 1536 aa11.39□□□□□ -0.59
PRE10YOR362C IKI3Q06706 1349 aaKnown RBP11.38□□□□□ -0.59
PRE10YOR362C DRS2P39524 1355 aa11.38□□□□□ -0.59
PRE10YOR362C PDR10P51533 1564 aa11.36□□□□□ -0.59
PRE10YOR362C TY3B-GQ99315 1547 aa11.35□□□□□ -0.59
PRE10YOR362C NUP170P38181 1502 aa11.35□□□□□ -0.59
PRE10YOR362C IQG1Q12280 1495 aa11.33□□□□□ -0.6
PRE10YOR362C YBT1P32386 1661 aa11.32□□□□□ -0.6
PRE10YOR362C BUD3P25558 1636 aa11.31□□□□□ -0.6
PRE10YOR362C CKB1P43639 278 aa11.3□□□□□ -0.6
PRE10YOR362C ITT1Q04638 464 aa11.3□□□□□ -0.6
PRE10YOR362C ARO1P08566 1588 aaKnown RBP11.25□□□□□ -0.61
PRE10YOR362C BNI1P41832 1953 aa11.24□□□□□ -0.61
PRE10YOR362C SRB8P25648 1427 aa11.24□□□□□ -0.61
PRE10YOR362C TRM3Q07527 1436 aa11.24□□□□□ -0.61
PRE10YOR362C MMS1Q06211 1407 aa11.2□□□□□ -0.62
PRE10YOR362C YSP2Q06681 1438 aa11.18□□□□□ -0.62
PRE10YOR362C DOP1Q03921 1698 aa11.18□□□□□ -0.62
PRE10YOR362C SSM4P40318 1319 aa11.18□□□□□ -0.62
PRE10YOR362C BUD21Q08492 214 aaPredicted RBP11.16□□□□□ -0.62
PRE10YOR362C BNR1P40450 1375 aa11.16□□□□□ -0.62
PRE10YOR362C SEC7P11075 2009 aaKnown RBP11.11□□□□□ -0.63
PRE10YOR362C CHC1P22137 1653 aaKnown RBP11.08□□□□□ -0.64
PRE10YOR362C ABP1P15891 592 aaKnown RBP11.01□□□□□ -0.65
PRE10YOR362C URN1Q06525 465 aaKnown RBP11.01□□□□□ -0.65
PRE10YOR362C DNF2Q12675 1612 aa11.01□□□□□ -0.65
PRE10YOR362C GCN2P15442 1659 aa10.95□□□□□ -0.66
PRE10YOR362C PAF1P38351 445 aa10.91□□□□□ -0.66
PRE10YOR362C YAP3P38749 330 aa10.91□□□□□ -0.66
PRE10YOR362C YOR093CQ12275 1648 aa10.87□□□□□ -0.67
PRE10YOR362C NOP7P53261 605 aaKnown RBP10.86□□□□□ -0.67
PRE10YOR362C NUP188P52593 1655 aaKnown RBP10.85□□□□□ -0.67
PRE10YOR362C IPL1P38991 367 aa10.85□□□□□ -0.67
PRE10YOR362C PDR5P33302 1511 aaKnown RBP10.84□□□□□ -0.67
PRE10YOR362C IML1P47170 1584 aa10.82□□□□□ -0.68
PRE10YOR362C MIF2P35201 549 aa10.81□□□□□ -0.68
PRE10YOR362C BFR2Q06631 534 aaKnown RBP10.8□□□□□ -0.68
PRE10YOR362C VMR1P38735 1592 aa10.8□□□□□ -0.68
PRE10YOR362C TYS1P36421 394 aaKnown RBP10.77□□□□□ -0.69
PRE10YOR362C DNF3Q12674 1656 aa10.76□□□□□ -0.69
PRE10YOR362C RAV1P47104 1357 aa10.75□□□□□ -0.69
PRE10YOR362C HAP1P0CE41 1502 aa10.74□□□□□ -0.69
PRE10YOR362C MAK10Q02197 733 aa10.72□□□□□ -0.69
PRE10YOR362C PDR11P40550 1411 aa10.72□□□□□ -0.69
PRE10YOR362C RTC1Q08281 1341 aa10.71□□□□□ -0.69
PRE10YOR362C ESL2P36168 1195 aa10.63□□□□□ -0.71
PRE10YOR362C MRX12P47084 519 aa10.6□□□□□ -0.71
PRE10YOR362C NAP1P25293 417 aaKnown RBP10.58□□□□□ -0.72
PRE10YOR362C TAF5P38129 798 aa10.58□□□□□ -0.72
PRE10YOR362C ALD4P46367 519 aaKnown RBP10.58□□□□□ -0.72
PRE10YOR362C POL5P39985 1022 aaKnown RBP10.57□□□□□ -0.72
PRE10YOR362C FAP1P53971 965 aa10.57□□□□□ -0.72
PRE10YOR362C SCT1P32784 759 aa10.56□□□□□ -0.72
PRE10YOR362C BCK1Q01389 1478 aa10.55□□□□□ -0.72
PRE10YOR362C YMR196WQ04336 1088 aa10.53□□□□□ -0.72
PRE10YOR362C TY1B-NL2Q99337 1749 aaKnown RBP10.53□□□□□ -0.72
PRE10YOR362C CAB1Q04430 367 aa10.52□□□□□ -0.73
PRE10YOR362C NUP192P47054 1683 aa10.52□□□□□ -0.73
PRE10YOR362C RAD9P14737 1309 aa10.52□□□□□ -0.73
PRE10YOR362C RIA1P53893 1110 aa10.51□□□□□ -0.73
PRE10YOR362C KRE5P22023 1365 aa10.5□□□□□ -0.73
PRE10YOR362C KIP3P53086 805 aaKnown RBP10.49□□□□□ -0.73
PRE10YOR362C TY3B-IQ7LHG5 1498 aaKnown RBP10.49□□□□□ -0.73
PRE10YOR362C TAF8Q03750 510 aa10.48□□□□□ -0.73
PRE10YOR362C CFT1Q06632 1357 aaKnown RBP10.48□□□□□ -0.73
PRE10YOR362C YFR006WP43590 535 aa10.47□□□□□ -0.73
PRE10YOR362C ORC1P54784 914 aaPredicted RBP10.47□□□□□ -0.73
PRE10YOR362C USO1P25386 1790 aa10.46□□□□□ -0.74
PRE10YOR362C SPE2P21182 396 aa10.45□□□□□ -0.74
PRE10YOR362C YNR029CP53729 429 aaKnown RBP10.42□□□□□ -0.74
PRE10YOR362C THI12P42883 340 aa10.41□□□□□ -0.74
PRE10YOR362C THI5P43534 340 aa10.41□□□□□ -0.74
PRE10YOR362C THI11P47183 340 aa10.41□□□□□ -0.74
PRE10YOR362C THI13Q07748 340 aa10.41□□□□□ -0.74
PRE10YOR362C YLR419WQ06698 1435 aaKnown RBP10.39□□□□□ -0.75
PRE10YOR362C MHP1P43638 1398 aa10.37□□□□□ -0.75
PRE10YOR362C CHZ1P40019 153 aaPredicted RBP10.35□□□□□ -0.75
PRE10YOR362C RCM1P53972 490 aa10.33□□□□□ -0.76
Retrieved 100 of 5,963 RNA–protein pairs in 13.6 ms