RNA–Protein interactions for RNA: YOL006C

TOP1, Transcript of Topoisomerase I, yeastyeast

Gene TOP1, Length 2,310 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP1YOL006C SSF1P38789 453 aaPredicted RBP4.54□□□□□ -1.68
TOP1YOL006C ATF2P53296 535 aa4.54□□□□□ -1.68
TOP1YOL006C RPL34AP87262 121 aaPredicted RBP4.54□□□□□ -1.68
TOP1YOL006C SEN54Q02825 467 aaPredicted RBP4.54□□□□□ -1.68
TOP1YOL006C VPS72Q03388 795 aa4.54□□□□□ -1.68
TOP1YOL006C PKC1P24583 1151 aa4.53□□□□□ -1.68
TOP1YOL006C CDC3P32457 520 aaKnown RBP4.53□□□□□ -1.68
TOP1YOL006C YJR008WP47085 338 aa4.53□□□□□ -1.68
TOP1YOL006C BIM1P40013 344 aa4.52□□□□□ -1.69
TOP1YOL006C SIS1P25294 352 aaKnown RBP4.51□□□□□ -1.69
TOP1YOL006C GLN1P32288 370 aaKnown RBP4.51□□□□□ -1.69
TOP1YOL006C ATG32P40458 529 aa4.51□□□□□ -1.69
TOP1YOL006C YJL007CP47080 104 aa4.51□□□□□ -1.69
TOP1YOL006C AI2P03876 854 aa4.5□□□□□ -1.69
TOP1YOL006C YGL015CP33199 130 aa4.5□□□□□ -1.69
TOP1YOL006C FPR4Q06205 392 aaPredicted RBP4.5□□□□□ -1.69
TOP1YOL006C CPS1P27614 576 aa4.49□□□□□ -1.69
TOP1YOL006C YAF9P53930 226 aa4.49□□□□□ -1.69
TOP1YOL006C GIN4Q12263 1142 aa4.49□□□□□ -1.69
TOP1YOL006C ITT1Q04638 464 aa4.49□□□□□ -1.69
TOP1YOL006C SSA2P10592 639 aaKnown RBP4.48□□□□□ -1.69
TOP1YOL006C YKR023WP36119 530 aaKnown RBP4.48□□□□□ -1.69
TOP1YOL006C REF2P42073 533 aaPredicted RBP4.48□□□□□ -1.69
TOP1YOL006C OSW7P43611 510 aa4.48□□□□□ -1.69
TOP1YOL006C ALD4P46367 519 aaKnown RBP4.48□□□□□ -1.69
TOP1YOL006C MDG1P53885 366 aa4.48□□□□□ -1.69
TOP1YOL006C MAK11P20484 414 aaKnown RBP4.47□□□□□ -1.69
TOP1YOL006C RCR1P38212 213 aa4.47□□□□□ -1.69
TOP1YOL006C RPL34BP40525 121 aaKnown RBP4.47□□□□□ -1.69
TOP1YOL006C NMD2P38798 1089 aaKnown RBP4.47□□□□□ -1.69
TOP1YOL006C NOB1Q08444 459 aaKnown RBP4.46□□□□□ -1.69
TOP1YOL006C ERG12P07277 443 aa4.46□□□□□ -1.7
TOP1YOL006C TIF1P10081 395 aaKnown RBP4.46□□□□□ -1.7
TOP1YOL006C TPO2P53283 614 aa4.46□□□□□ -1.7
TOP1YOL006C HAT1Q12341 374 aa4.46□□□□□ -1.7
TOP1YOL006C KEX1P09620 729 aa4.45□□□□□ -1.7
TOP1YOL006C NNF1P47149 201 aa4.45□□□□□ -1.7
TOP1YOL006C TTI1P36097 1038 aa4.44□□□□□ -1.7
TOP1YOL006C CST6P40535 587 aa4.44□□□□□ -1.7
TOP1YOL006C BUD21Q08492 214 aaPredicted RBP4.44□□□□□ -1.7
TOP1YOL006C JSN1P47135 1091 aaKnown RBP RIP-Chip data4.44□□□□□ -1.7not detected
TOP1YOL006C CSN12P47130 423 aa4.43□□□□□ -1.7
TOP1YOL006C UBX5Q06682 500 aa4.43□□□□□ -1.7
TOP1YOL006C YPR204WQ08995 1032 aa4.43□□□□□ -1.7
TOP1YOL006C COX6P00427 148 aa4.42□□□□□ -1.7
TOP1YOL006C IPL1P38991 367 aa4.42□□□□□ -1.7
TOP1YOL006C ALD2P47771 506 aa4.42□□□□□ -1.7
TOP1YOL006C PDR1P12383 1068 aa4.41□□□□□ -1.7
TOP1YOL006C COQ8P27697 501 aa4.41□□□□□ -1.7
TOP1YOL006C TOM20P35180 183 aa4.41□□□□□ -1.7
TOP1YOL006C NAB3P38996 802 aaKnown RBP RIP-Chip data4.41□□□□□ -1.7not detected
TOP1YOL006C BBC1P47068 1157 aa4.41□□□□□ -1.7
TOP1YOL006C MRM1P25270 412 aa4.41□□□□□ -1.7
TOP1YOL006C MNN4P36044 1178 aa4.41□□□□□ -1.7
TOP1YOL006C STM1P39015 273 aaKnown RBP4.41□□□□□ -1.7
TOP1YOL006C RNH70P53331 553 aa4.4□□□□□ -1.7
TOP1YOL006C YML083CQ04526 418 aa4.4□□□□□ -1.7
TOP1YOL006C SEC20P28791 383 aa4.4□□□□□ -1.71
TOP1YOL006C RTG2P32608 588 aaKnown RBP4.4□□□□□ -1.71
TOP1YOL006C HOP09932 586 aa4.39□□□□□ -1.71
TOP1YOL006C RTG3P38165 486 aa4.39□□□□□ -1.71
TOP1YOL006C SVF1Q05515 481 aa4.39□□□□□ -1.71
TOP1YOL006C NOP53Q12080 455 aaKnown RBP4.39□□□□□ -1.71
TOP1YOL006C TFC8Q12308 588 aa4.39□□□□□ -1.71
TOP1YOL006C PUP1P25043 261 aa4.38□□□□□ -1.71
TOP1YOL006C BIO2P32451 375 aa4.38□□□□□ -1.71
TOP1YOL006C RRP14P36080 434 aaKnown RBP4.38□□□□□ -1.71
TOP1YOL006C YBL036CP38197 257 aa4.38□□□□□ -1.71
TOP1YOL006C FPR3P38911 411 aaKnown RBP4.38□□□□□ -1.71
TOP1YOL006C RRP15Q06511 250 aaPredicted RBP4.38□□□□□ -1.71
TOP1YOL006C TSR4P25040 408 aa4.37□□□□□ -1.71
TOP1YOL006C KRI1P42846 591 aaKnown RBP4.37□□□□□ -1.71
TOP1YOL006C ZDS1P50111 915 aaKnown RBP4.37□□□□□ -1.71
TOP1YOL006C YOL098CQ12496 1037 aa4.37□□□□□ -1.71
TOP1YOL006C PPG1P32838 368 aa4.37□□□□□ -1.71
TOP1YOL006C UBP14P38237 781 aaKnown RBP4.37□□□□□ -1.71
TOP1YOL006C MAK16P10962 306 aaPredicted RBP4.35□□□□□ -1.71
TOP1YOL006C TSR3Q12094 313 aaKnown RBP4.35□□□□□ -1.71
TOP1YOL006C YBL113CQ7M4S9 792 aa4.35□□□□□ -1.71
TOP1YOL006C DCD1P06773 312 aa4.35□□□□□ -1.71
TOP1YOL006C POL32P47110 350 aa4.35□□□□□ -1.71
TOP1YOL006C ATE1P16639 503 aa4.34□□□□□ -1.71
TOP1YOL006C KTR1P27810 393 aaKnown RBP4.34□□□□□ -1.71
TOP1YOL006C MSC6Q08818 692 aaKnown RBP4.34□□□□□ -1.71
TOP1YOL006C YNL108CP53929 270 aa4.34□□□□□ -1.72
TOP1YOL006C SIS2P36024 562 aa4.33□□□□□ -1.72
TOP1YOL006C TPM2P40414 161 aa4.33□□□□□ -1.72
TOP1YOL006C TFG1P41895 735 aaPredicted RBP4.33□□□□□ -1.72
TOP1YOL006C SSB1P11484 613 aaKnown RBP4.33□□□□□ -1.72
TOP1YOL006C SSB2P40150 613 aaKnown RBP4.33□□□□□ -1.72
TOP1YOL006C JIP5Q06214 492 aaPredicted RBP4.33□□□□□ -1.72
TOP1YOL006C ERP5P38819 212 aa4.32□□□□□ -1.72
TOP1YOL006C PMC1P38929 1173 aaPredicted RBP4.32□□□□□ -1.72
TOP1YOL006C MAG2Q06436 670 aaKnown RBP4.32□□□□□ -1.72
TOP1YOL006C YFR016CP43597 1233 aaKnown RBP4.32□□□□□ -1.72
TOP1YOL006C PSE1P32337 1089 aaKnown RBP4.31□□□□□ -1.72
TOP1YOL006C MIF2P35201 549 aa4.31□□□□□ -1.72
TOP1YOL006C KIP3P53086 805 aaKnown RBP4.31□□□□□ -1.72
TOP1YOL006C ALG12P53730 551 aa4.31□□□□□ -1.72
TOP1YOL006C OYE2Q03558 400 aaKnown RBP4.31□□□□□ -1.72
Retrieved 100 of 5,963 RNA–protein pairs in 8.7 ms