RNA–Protein interactions for RNA: YNR004W

SWM2, Transcript of Protein with a role in snRNA and snoRNA cap trimethylation, yeastyeast

Gene SWM2, Length 441 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWM2YNR004W RCR1P38212 213 aa8.81□□□□□ -1
SWM2YNR004W DCW1P36091 449 aa8.77□□□□□ -1.01
SWM2YNR004W PRE3P38624 215 aa8.77□□□□□ -1.01
SWM2YNR004W YEL023CP39992 682 aa8.75□□□□□ -1.01
SWM2YNR004W PTC4P38089 393 aa8.73□□□□□ -1.01
SWM2YNR004W VRP1P37370 817 aa8.6□□□□□ -1.03
SWM2YNR004W GRE2Q12068 342 aaKnown RBP8.6□□□□□ -1.03
SWM2YNR004W XDJ1P39102 459 aa8.59□□□□□ -1.03
SWM2YNR004W PML39Q03760 334 aa8.59□□□□□ -1.03
SWM2YNR004W ELP4Q02884 456 aaKnown RBP8.58□□□□□ -1.04
SWM2YNR004W YDR344CQ05510 147 aa8.57□□□□□ -1.04
SWM2YNR004W MIF2P35201 549 aa8.51□□□□□ -1.05
SWM2YNR004W ATH1P48016 1211 aa8.51□□□□□ -1.05
SWM2YNR004W DPS1P04802 557 aaKnown RBP8.49□□□□□ -1.05
SWM2YNR004W GUT1P32190 709 aa8.47□□□□□ -1.05
SWM2YNR004W ARH1P48360 493 aa8.45□□□□□ -1.06
SWM2YNR004W MAK11P20484 414 aaKnown RBP8.44□□□□□ -1.06
SWM2YNR004W PTC3P34221 468 aaKnown RBP8.44□□□□□ -1.06
SWM2YNR004W MID1P41821 548 aa8.42□□□□□ -1.06
SWM2YNR004W PEX29Q03370 554 aa8.42□□□□□ -1.06
SWM2YNR004W EDS1P38073 919 aa8.41□□□□□ -1.06
SWM2YNR004W SPT23P35210 1082 aa8.37□□□□□ -1.07
SWM2YNR004W NST1P53935 1240 aa8.37□□□□□ -1.07
SWM2YNR004W RAM2P29703 316 aa8.36□□□□□ -1.07
SWM2YNR004W AI4P03878 556 aa8.32□□□□□ -1.08
SWM2YNR004W COQ8P27697 501 aa8.32□□□□□ -1.08
SWM2YNR004W HAP5Q02516 242 aa8.32□□□□□ -1.08
SWM2YNR004W MPH3P0CE00 602 aa8.31□□□□□ -1.08
SWM2YNR004W SOL3P38858 249 aa8.31□□□□□ -1.08
SWM2YNR004W BNI4P53858 892 aa8.27□□□□□ -1.09
SWM2YNR004W ILV3P39522 585 aaKnown RBP8.26□□□□□ -1.09
SWM2YNR004W PTC2P39966 464 aaKnown RBP8.26□□□□□ -1.09
SWM2YNR004W SRC1Q03707 834 aa8.24□□□□□ -1.09
SWM2YNR004W YML082WQ04533 649 aaKnown RBP8.22□□□□□ -1.09
SWM2YNR004W MPC54Q08550 464 aa8.22□□□□□ -1.09
SWM2YNR004W YGR273CP53329 174 aa8.18□□□□□ -1.1
SWM2YNR004W NMA111P53920 997 aa8.14□□□□□ -1.11
SWM2YNR004W RGA2Q06407 1009 aa8.12□□□□□ -1.11
SWM2YNR004W NOP53Q12080 455 aaKnown RBP8.12□□□□□ -1.11
SWM2YNR004W SLI15P38283 698 aa8.11□□□□□ -1.11
SWM2YNR004W DPL1Q05567 589 aa8.1□□□□□ -1.11
SWM2YNR004W RGA1P39083 1007 aa8.06□□□□□ -1.12
SWM2YNR004W RAS1P01119 309 aa8.05□□□□□ -1.12
SWM2YNR004W YPR015CQ12531 247 aa8.04□□□□□ -1.12
SWM2YNR004W GYP1Q08484 637 aa8□□□□□ -1.13
SWM2YNR004W ISU2Q12056 156 aa8□□□□□ -1.13
SWM2YNR004W RAM1P22007 431 aa7.99□□□□□ -1.13
SWM2YNR004W KEX1P09620 729 aa7.97□□□□□ -1.13
SWM2YNR004W AMS1P22855 1083 aa7.96□□□□□ -1.14
SWM2YNR004W TRK1P12685 1235 aa7.95□□□□□ -1.14
SWM2YNR004W CDC73Q06697 393 aa7.93□□□□□ -1.14
SWM2YNR004W PDR1P12383 1068 aa7.88□□□□□ -1.15
SWM2YNR004W SAS4Q04003 481 aa7.88□□□□□ -1.15
SWM2YNR004W YLR326WQ06170 240 aaKnown RBP7.85□□□□□ -1.15
SWM2YNR004W YEL077CQ3E7X8 1277 aa7.85□□□□□ -1.15
SWM2YNR004W SDH2P21801 266 aa7.84□□□□□ -1.15
SWM2YNR004W VHR2P40041 505 aa7.83□□□□□ -1.16
SWM2YNR004W RPP1BP10622 106 aaKnown RBP7.82□□□□□ -1.16
SWM2YNR004W RAD54P32863 898 aa7.8□□□□□ -1.16
SWM2YNR004W UBP14P38237 781 aaKnown RBP7.8□□□□□ -1.16
SWM2YNR004W PCS60P38137 543 aaKnown RBP RIP-Chip data7.79□□□□□ -1.16not detected
SWM2YNR004W MRF1P30775 413 aaPredicted RBP7.78□□□□□ -1.16
SWM2YNR004W SET1P38827 1080 aaKnown RBP7.78□□□□□ -1.16
SWM2YNR004W PRT1P06103 763 aaKnown RBP7.7□□□□□ -1.18
SWM2YNR004W PEX21P50091 288 aa7.7□□□□□ -1.18
SWM2YNR004W YPL062WQ02781 134 aa7.7□□□□□ -1.18
SWM2YNR004W BUD20Q08004 166 aaPredicted RBP7.7□□□□□ -1.18
SWM2YNR004W YRR1Q12172 810 aa7.7□□□□□ -1.18
SWM2YNR004W ERG12P07277 443 aa7.68□□□□□ -1.18
SWM2YNR004W KIC1P38692 1080 aa7.67□□□□□ -1.18
SWM2YNR004W BRE2P43132 505 aa7.66□□□□□ -1.18
SWM2YNR004W STR2P47164 639 aa7.66□□□□□ -1.18
SWM2YNR004W ISM1P48526 1002 aa7.63□□□□□ -1.19
SWM2YNR004W NUD1P32336 851 aa7.62□□□□□ -1.19
SWM2YNR004W AIR1P40507 360 aaKnown RBP7.62□□□□□ -1.19
SWM2YNR004W GCR2Q01722 534 aa7.62□□□□□ -1.19
SWM2YNR004W YDR090CQ03193 310 aa7.62□□□□□ -1.19
SWM2YNR004W TFB4Q12004 338 aa7.61□□□□□ -1.19
SWM2YNR004W GBP2P25555 427 aaKnown RBP RIP-Chip data7.6□□□□□ -1.19not detected
SWM2YNR004W GAR1P28007 205 aaKnown RBP7.6□□□□□ -1.19
SWM2YNR004W CST6P40535 587 aa7.6□□□□□ -1.19
SWM2YNR004W CSC1Q06538 782 aa7.6□□□□□ -1.19
SWM2YNR004W TUM1Q08686 304 aaKnown RBP7.6□□□□□ -1.19
SWM2YNR004W NPL4P33755 580 aa7.59□□□□□ -1.19
SWM2YNR004W GAP1P19145 602 aaPredicted RBP7.58□□□□□ -1.2
SWM2YNR004W CLA4P48562 842 aa7.58□□□□□ -1.2
SWM2YNR004W IFH1P39520 1085 aa7.57□□□□□ -1.2
SWM2YNR004W SPT16P32558 1035 aaKnown RBP7.55□□□□□ -1.2
SWM2YNR004W LAM6Q08001 693 aa7.54□□□□□ -1.2
SWM2YNR004W GCD11P32481 527 aaKnown RBP7.53□□□□□ -1.2
SWM2YNR004W FRK1Q03002 865 aaPredicted RBP7.53□□□□□ -1.2
SWM2YNR004W TY1A-DR4O74302 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-HP0C2I4 478 aaKnown RBP7.51□□□□□ -1.21
SWM2YNR004W TY1A-AP0CX57 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-PR1P0CX58 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-ORP0CX59 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-PR2P0CX60 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-DR5P0CX65 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-ER2P0CX66 440 aa7.51□□□□□ -1.21
SWM2YNR004W TY1A-GR3P0CX67 440 aa7.51□□□□□ -1.21
Retrieved 100 of 5,963 RNA–protein pairs in 12.4 ms