RNA–Protein interactions for RNA: YNL304W

YPT11, Transcript of Rab GTPase, yeastyeast

Gene YPT11, Length 1,254 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
YPT11YNL304W TY1B-BLQ12490 1755 aa12.46□□□□□ -0.41
YPT11YNL304W NTE1Q04958 1679 aa12.44□□□□□ -0.42
YPT11YNL304W RTT106P40161 455 aa12.41□□□□□ -0.42
YPT11YNL304W NUP159P40477 1460 aa12.4□□□□□ -0.43
YPT11YNL304W RPO21P04050 1733 aaKnown RBP12.39□□□□□ -0.43
YPT11YNL304W PDR15Q04182 1529 aaKnown RBP12.38□□□□□ -0.43
YPT11YNL304W IFH1P39520 1085 aa12.35□□□□□ -0.43
YPT11YNL304W SNT2P53127 1403 aa12.35□□□□□ -0.43
YPT11YNL304W ULS1Q08562 1619 aa12.33□□□□□ -0.43
YPT11YNL304W GEA2P39993 1459 aaKnown RBP12.3□□□□□ -0.44
YPT11YNL304W GEA1P47102 1408 aaPredicted RBP12.26□□□□□ -0.45
YPT11YNL304W MET10P39692 1035 aa12.25□□□□□ -0.45
YPT11YNL304W YRF1-1P0CX20 1796 aa12.25□□□□□ -0.45
YPT11YNL304W YRF1-5P0CX21 1796 aa12.25□□□□□ -0.45
YPT11YNL304W YRF1-8P0CX22 1796 aa12.25□□□□□ -0.45
YPT11YNL304W LTE1P07866 1435 aa12.24□□□□□ -0.45
YPT11YNL304W VPS15P22219 1454 aa12.24□□□□□ -0.45
YPT11YNL304W IRC20Q06554 1556 aa12.16□□□□□ -0.46
YPT11YNL304W PDR12Q02785 1511 aa12.16□□□□□ -0.46
YPT11YNL304W CAT8P39113 1433 aa12.14□□□□□ -0.47
YPT11YNL304W SPO14P36126 1683 aa12.13□□□□□ -0.47
YPT11YNL304W NUP157P40064 1391 aaKnown RBP12.11□□□□□ -0.47
YPT11YNL304W GDB1Q06625 1536 aa12.11□□□□□ -0.47
YPT11YNL304W IKI3Q06706 1349 aaKnown RBP12.09□□□□□ -0.47
YPT11YNL304W DRS2P39524 1355 aa12.07□□□□□ -0.48
YPT11YNL304W YBT1P32386 1661 aa12.07□□□□□ -0.48
YPT11YNL304W NUP170P38181 1502 aa12.06□□□□□ -0.48
YPT11YNL304W TY3B-GQ99315 1547 aa12.06□□□□□ -0.48
YPT11YNL304W PDR10P51533 1564 aa12.05□□□□□ -0.48
YPT11YNL304W BUD3P25558 1636 aa12.03□□□□□ -0.48
YPT11YNL304W IQG1Q12280 1495 aa12.02□□□□□ -0.48
YPT11YNL304W CKB1P43639 278 aa12.01□□□□□ -0.49
YPT11YNL304W ARO1P08566 1588 aaKnown RBP11.97□□□□□ -0.49
YPT11YNL304W ITT1Q04638 464 aa11.95□□□□□ -0.5
YPT11YNL304W SRB8P25648 1427 aa11.94□□□□□ -0.5
YPT11YNL304W TRM3Q07527 1436 aa11.93□□□□□ -0.5
YPT11YNL304W BNI1P41832 1953 aa11.92□□□□□ -0.5
YPT11YNL304W DOP1Q03921 1698 aa11.91□□□□□ -0.5
YPT11YNL304W MMS1Q06211 1407 aa11.88□□□□□ -0.51
YPT11YNL304W SSM4P40318 1319 aa11.86□□□□□ -0.51
YPT11YNL304W BUD21Q08492 214 aaPredicted RBP11.85□□□□□ -0.51
YPT11YNL304W YSP2Q06681 1438 aa11.85□□□□□ -0.51
YPT11YNL304W BNR1P40450 1375 aa11.84□□□□□ -0.51
YPT11YNL304W SEC7P11075 2009 aaKnown RBP11.84□□□□□ -0.51
YPT11YNL304W CHC1P22137 1653 aaKnown RBP11.81□□□□□ -0.52
YPT11YNL304W DNF2Q12675 1612 aa11.71□□□□□ -0.53
YPT11YNL304W ABP1P15891 592 aaKnown RBP11.69□□□□□ -0.54
YPT11YNL304W GCN2P15442 1659 aa11.68□□□□□ -0.54
YPT11YNL304W URN1Q06525 465 aaKnown RBP11.67□□□□□ -0.54
YPT11YNL304W PAF1P38351 445 aa11.61□□□□□ -0.55
YPT11YNL304W YOR093CQ12275 1648 aa11.57□□□□□ -0.56
YPT11YNL304W NUP188P52593 1655 aaKnown RBP11.56□□□□□ -0.56
YPT11YNL304W YAP3P38749 330 aa11.56□□□□□ -0.56
YPT11YNL304W NOP7P53261 605 aaKnown RBP11.56□□□□□ -0.56
YPT11YNL304W PDR5P33302 1511 aaKnown RBP11.52□□□□□ -0.57
YPT11YNL304W IML1P47170 1584 aa11.5□□□□□ -0.57
YPT11YNL304W IPL1P38991 367 aa11.49□□□□□ -0.57
YPT11YNL304W VMR1P38735 1592 aa11.49□□□□□ -0.57
YPT11YNL304W BFR2Q06631 534 aaKnown RBP11.47□□□□□ -0.57
YPT11YNL304W DNF3Q12674 1656 aa11.46□□□□□ -0.58
YPT11YNL304W MIF2P35201 549 aa11.44□□□□□ -0.58
YPT11YNL304W RAV1P47104 1357 aa11.41□□□□□ -0.58
YPT11YNL304W TYS1P36421 394 aaKnown RBP11.41□□□□□ -0.58
YPT11YNL304W HAP1P0CE41 1502 aa11.37□□□□□ -0.59
YPT11YNL304W RTC1Q08281 1341 aa11.36□□□□□ -0.59
YPT11YNL304W PDR11P40550 1411 aa11.36□□□□□ -0.59
YPT11YNL304W MAK10Q02197 733 aa11.35□□□□□ -0.59
YPT11YNL304W ESL2P36168 1195 aa11.28□□□□□ -0.6
YPT11YNL304W MRX12P47084 519 aa11.27□□□□□ -0.61
YPT11YNL304W POL5P39985 1022 aaKnown RBP11.26□□□□□ -0.61
YPT11YNL304W NAP1P25293 417 aaKnown RBP11.25□□□□□ -0.61
YPT11YNL304W TAF5P38129 798 aa11.25□□□□□ -0.61
YPT11YNL304W SCT1P32784 759 aa11.23□□□□□ -0.61
YPT11YNL304W ALD4P46367 519 aaKnown RBP11.21□□□□□ -0.61
YPT11YNL304W BCK1Q01389 1478 aa11.2□□□□□ -0.62
YPT11YNL304W TY1B-NL2Q99337 1749 aaKnown RBP11.2□□□□□ -0.62
YPT11YNL304W NUP192P47054 1683 aa11.2□□□□□ -0.62
YPT11YNL304W USO1P25386 1790 aa11.18□□□□□ -0.62
YPT11YNL304W RAD9P14737 1309 aa11.17□□□□□ -0.62
YPT11YNL304W RIA1P53893 1110 aa11.17□□□□□ -0.62
YPT11YNL304W CAB1Q04430 367 aa11.17□□□□□ -0.62
YPT11YNL304W KRE5P22023 1365 aa11.16□□□□□ -0.62
YPT11YNL304W ORC1P54784 914 aaPredicted RBP11.16□□□□□ -0.62
YPT11YNL304W YMR196WQ04336 1088 aa11.16□□□□□ -0.62
YPT11YNL304W KIP3P53086 805 aaKnown RBP11.14□□□□□ -0.63
YPT11YNL304W TAF8Q03750 510 aa11.13□□□□□ -0.63
YPT11YNL304W TY3B-IQ7LHG5 1498 aaKnown RBP11.12□□□□□ -0.63
YPT11YNL304W SPE2P21182 396 aa11.1□□□□□ -0.63
YPT11YNL304W CFT1Q06632 1357 aaKnown RBP11.1□□□□□ -0.63
YPT11YNL304W YFR006WP43590 535 aa11.08□□□□□ -0.64
YPT11YNL304W YNR029CP53729 429 aaKnown RBP11.05□□□□□ -0.64
YPT11YNL304W YLR419WQ06698 1435 aaKnown RBP11.05□□□□□ -0.64
YPT11YNL304W MHP1P43638 1398 aa11.03□□□□□ -0.64
YPT11YNL304W THI12P42883 340 aa11.03□□□□□ -0.64
YPT11YNL304W THI5P43534 340 aa11.03□□□□□ -0.64
YPT11YNL304W THI11P47183 340 aa11.03□□□□□ -0.64
YPT11YNL304W THI13Q07748 340 aa11.03□□□□□ -0.64
YPT11YNL304W CHZ1P40019 153 aaPredicted RBP11□□□□□ -0.65
YPT11YNL304W RCM1P53972 490 aa10.97□□□□□ -0.65
YPT11YNL304W SEC3P33332 1336 aaKnown RBP10.96□□□□□ -0.65
Retrieved 100 of 5,963 RNA–protein pairs in 56.5 ms