RNA–Protein interactions for RNA: YMR190C

SGS1, Transcript of RecQ family nucleolar DNA helicase, yeastyeast

Gene SGS1, Length 4,344 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SGS1YMR190C TY1B-PLQ12414 1755 aaKnown RBP3.93□□□□□ -1.78
SGS1YMR190C SCT1P32784 759 aa3.93□□□□□ -1.78
SGS1YMR190C NUP170P38181 1502 aa3.92□□□□□ -1.78
SGS1YMR190C STU1P38198 1513 aa3.92□□□□□ -1.78
SGS1YMR190C UBP1P25037 809 aa3.92□□□□□ -1.78
SGS1YMR190C MMS22Q06164 1454 aa3.91□□□□□ -1.78
SGS1YMR190C SMC4Q12267 1418 aa3.91□□□□□ -1.78
SGS1YMR190C NUP159P40477 1460 aa3.91□□□□□ -1.78
SGS1YMR190C YOR1P53049 1477 aa3.9□□□□□ -1.79
SGS1YMR190C BFR2Q06631 534 aaKnown RBP3.89□□□□□ -1.79
SGS1YMR190C MYO4P32492 1471 aa3.86□□□□□ -1.79
SGS1YMR190C TY1B-JR2P47100 1755 aaKnown RBP3.86□□□□□ -1.79
SGS1YMR190C TY1B-ER2Q03619 1755 aa3.86□□□□□ -1.79
SGS1YMR190C TY1B-MR1Q04214 1755 aa3.86□□□□□ -1.79
SGS1YMR190C TY1B-MR2Q04670 1755 aaKnown RBP3.86□□□□□ -1.79
SGS1YMR190C TY1B-LR1Q12088 1755 aaKnown RBP3.86□□□□□ -1.79
SGS1YMR190C TY1B-NL1Q12112 1755 aa3.86□□□□□ -1.79
SGS1YMR190C TY1B-GR1Q12141 1755 aa3.86□□□□□ -1.79
SGS1YMR190C TY1B-BLQ12490 1755 aa3.86□□□□□ -1.79
SGS1YMR190C NAP1P25293 417 aaKnown RBP3.85□□□□□ -1.79
SGS1YMR190C NSR1P27476 414 aaKnown RBP RIP-Chip data3.85□□□□□ -1.79not detected
SGS1YMR190C YAP3P38749 330 aa3.83□□□□□ -1.8
SGS1YMR190C GTT3P39996 337 aa3.83□□□□□ -1.8
SGS1YMR190C SPP41P38904 1435 aa3.83□□□□□ -1.8
SGS1YMR190C SNT2P53127 1403 aa3.83□□□□□ -1.8
SGS1YMR190C YAH1Q12184 172 aaKnown RBP3.83□□□□□ -1.8
SGS1YMR190C MLP2P40457 1679 aa3.83□□□□□ -1.8
SGS1YMR190C ULS1Q08562 1619 aa3.82□□□□□ -1.8
SGS1YMR190C IQG1Q12280 1495 aa3.82□□□□□ -1.8
SGS1YMR190C DNF2Q12675 1612 aa3.82□□□□□ -1.8
SGS1YMR190C MAK10Q02197 733 aa3.81□□□□□ -1.8
SGS1YMR190C PDR10P51533 1564 aa3.81□□□□□ -1.8
SGS1YMR190C RPS9BP05755 195 aaKnown RBP3.79□□□□□ -1.8
SGS1YMR190C TSC11P40061 1430 aa3.79□□□□□ -1.8
SGS1YMR190C NTE1Q04958 1679 aa3.79□□□□□ -1.8
SGS1YMR190C RPO21P04050 1733 aaKnown RBP3.79□□□□□ -1.8
SGS1YMR190C CFT1Q06632 1357 aaKnown RBP3.79□□□□□ -1.8
SGS1YMR190C UGA2P38067 497 aa3.79□□□□□ -1.8
SGS1YMR190C SNQ2P32568 1501 aaKnown RBP3.78□□□□□ -1.8
SGS1YMR190C NUP157P40064 1391 aaKnown RBP3.76□□□□□ -1.81
SGS1YMR190C YBT1P32386 1661 aa3.76□□□□□ -1.81
SGS1YMR190C YJL181WP46987 611 aa3.76□□□□□ -1.81
SGS1YMR190C TY3B-GQ99315 1547 aa3.76□□□□□ -1.81
SGS1YMR190C VTH1P40438 1549 aa3.76□□□□□ -1.81
SGS1YMR190C VTH2P40890 1549 aa3.76□□□□□ -1.81
SGS1YMR190C SPT7P35177 1332 aa3.75□□□□□ -1.81
SGS1YMR190C BNI1P41832 1953 aa3.75□□□□□ -1.81
SGS1YMR190C DOP1Q03921 1698 aa3.75□□□□□ -1.81
SGS1YMR190C TY1B-NL2Q99337 1749 aaKnown RBP3.75□□□□□ -1.81
SGS1YMR190C HAP1P0CE41 1502 aa3.75□□□□□ -1.81
SGS1YMR190C YMR074CQ04773 145 aa3.74□□□□□ -1.81
SGS1YMR190C ENV9Q08651 330 aa3.74□□□□□ -1.81
SGS1YMR190C GDB1Q06625 1536 aa3.74□□□□□ -1.81
SGS1YMR190C LEU3P08638 886 aa3.74□□□□□ -1.81
SGS1YMR190C YRF1-1P0CX20 1796 aa3.74□□□□□ -1.81
SGS1YMR190C YRF1-5P0CX21 1796 aa3.74□□□□□ -1.81
SGS1YMR190C YRF1-8P0CX22 1796 aa3.74□□□□□ -1.81
SGS1YMR190C PDR15Q04182 1529 aaKnown RBP3.74□□□□□ -1.81
SGS1YMR190C SSA1P10591 642 aaKnown RBP3.72□□□□□ -1.81
SGS1YMR190C YIL055CP40523 627 aaKnown RBP3.71□□□□□ -1.81
SGS1YMR190C MRX12P47084 519 aa3.71□□□□□ -1.82
SGS1YMR190C ALD2P47771 506 aa3.71□□□□□ -1.82
SGS1YMR190C CAT8P39113 1433 aa3.71□□□□□ -1.82
SGS1YMR190C PDR12Q02785 1511 aa3.71□□□□□ -1.82
SGS1YMR190C YEF3P16521 1044 aaKnown RBP3.7□□□□□ -1.82
SGS1YMR190C GLN1P32288 370 aaKnown RBP3.7□□□□□ -1.82
SGS1YMR190C PRP40P33203 583 aaKnown RBP3.69□□□□□ -1.82
SGS1YMR190C RRT14P40470 206 aa3.68□□□□□ -1.82
SGS1YMR190C SPO14P36126 1683 aa3.68□□□□□ -1.82
SGS1YMR190C RRD1P40454 393 aaKnown RBP3.67□□□□□ -1.82
SGS1YMR190C DNF3Q12674 1656 aa3.66□□□□□ -1.82
SGS1YMR190C PAF1P38351 445 aa3.65□□□□□ -1.83
SGS1YMR190C LAM6Q08001 693 aa3.64□□□□□ -1.83
SGS1YMR190C GEA1P47102 1408 aaPredicted RBP3.64□□□□□ -1.83
SGS1YMR190C ARO1P08566 1588 aaKnown RBP3.64□□□□□ -1.83
SGS1YMR190C ALD3P54114 506 aa3.63□□□□□ -1.83
SGS1YMR190C IMH1Q06704 911 aaKnown RBP3.63□□□□□ -1.83
SGS1YMR190C ENP1P38333 483 aaKnown RBP3.63□□□□□ -1.83
SGS1YMR190C PEX21P50091 288 aa3.63□□□□□ -1.83
SGS1YMR190C IKI3Q06706 1349 aaKnown RBP3.63□□□□□ -1.83
SGS1YMR190C THI12P42883 340 aa3.62□□□□□ -1.83
SGS1YMR190C THI5P43534 340 aa3.62□□□□□ -1.83
SGS1YMR190C THI11P47183 340 aa3.62□□□□□ -1.83
SGS1YMR190C THI13Q07748 340 aa3.62□□□□□ -1.83
SGS1YMR190C PDR11P40550 1411 aa3.62□□□□□ -1.83
SGS1YMR190C SAP155P43612 1002 aa3.61□□□□□ -1.83
SGS1YMR190C GCN2P15442 1659 aa3.61□□□□□ -1.83
SGS1YMR190C CHC1P22137 1653 aaKnown RBP3.6□□□□□ -1.83
SGS1YMR190C BCK1Q01389 1478 aa3.59□□□□□ -1.83
SGS1YMR190C PDR5P33302 1511 aaKnown RBP3.59□□□□□ -1.83
SGS1YMR190C BUD21Q08492 214 aaPredicted RBP3.59□□□□□ -1.84
SGS1YMR190C IML1P47170 1584 aa3.59□□□□□ -1.84
SGS1YMR190C BUD31P25337 157 aaPredicted RBP3.58□□□□□ -1.84
SGS1YMR190C SSM4P40318 1319 aa3.57□□□□□ -1.84
SGS1YMR190C IPL1P38991 367 aa3.57□□□□□ -1.84
SGS1YMR190C CKB1P43639 278 aa3.57□□□□□ -1.84
SGS1YMR190C VMR1P38735 1592 aa3.56□□□□□ -1.84
SGS1YMR190C ROM2P51862 1356 aaKnown RBP3.56□□□□□ -1.84
SGS1YMR190C SSA2P10592 639 aaKnown RBP3.55□□□□□ -1.84
SGS1YMR190C MEC3Q02574 474 aa3.55□□□□□ -1.84
Retrieved 100 of 5,963 RNA–protein pairs in 8.5 ms