RNA–Protein interactions for RNA: YMR138W

CIN4, Transcript of GTP-binding protein involved in beta-tubulin (Tub2p) folding, yeastyeast

Gene CIN4, Length 576 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
CIN4YMR138W LTE1P07866 1435 aa9.37□□□□□ -0.91
CIN4YMR138W STH1P32597 1359 aa9.37□□□□□ -0.91
CIN4YMR138W RPO21P04050 1733 aaKnown RBP9.36□□□□□ -0.91
CIN4YMR138W YRF1-1P0CX20 1796 aa9.32□□□□□ -0.92
CIN4YMR138W YRF1-5P0CX21 1796 aa9.32□□□□□ -0.92
CIN4YMR138W YRF1-8P0CX22 1796 aa9.32□□□□□ -0.92
CIN4YMR138W VPS15P22219 1454 aa9.29□□□□□ -0.92
CIN4YMR138W ULS1Q08562 1619 aa9.29□□□□□ -0.92
CIN4YMR138W GEA2P39993 1459 aaKnown RBP9.28□□□□□ -0.92
CIN4YMR138W PDR12Q02785 1511 aa9.27□□□□□ -0.93
CIN4YMR138W MLP2P40457 1679 aa9.26□□□□□ -0.93
CIN4YMR138W PDR15Q04182 1529 aaKnown RBP9.26□□□□□ -0.93
CIN4YMR138W TAF7Q05021 590 aa9.26□□□□□ -0.93
CIN4YMR138W IRC20Q06554 1556 aa9.24□□□□□ -0.93
CIN4YMR138W BNI1P41832 1953 aa9.21□□□□□ -0.94
CIN4YMR138W MET10P39692 1035 aa9.2□□□□□ -0.94
CIN4YMR138W SAS10Q12136 610 aaPredicted RBP9.2□□□□□ -0.94
CIN4YMR138W GDB1Q06625 1536 aa9.18□□□□□ -0.94
CIN4YMR138W SPO14P36126 1683 aa9.16□□□□□ -0.94
CIN4YMR138W GEA1P47102 1408 aaPredicted RBP9.15□□□□□ -0.94
CIN4YMR138W RTT106P40161 455 aa9.14□□□□□ -0.95
CIN4YMR138W DRS2P39524 1355 aa9.13□□□□□ -0.95
CIN4YMR138W TY3B-GQ99315 1547 aa9.13□□□□□ -0.95
CIN4YMR138W CAT8P39113 1433 aa9.13□□□□□ -0.95
CIN4YMR138W ITT1Q04638 464 aa9.12□□□□□ -0.95
CIN4YMR138W PDR10P51533 1564 aa9.12□□□□□ -0.95
CIN4YMR138W NUP170P38181 1502 aa9.1□□□□□ -0.95
CIN4YMR138W NUP157P40064 1391 aaKnown RBP9.1□□□□□ -0.95
CIN4YMR138W IQG1Q12280 1495 aa9.09□□□□□ -0.95
CIN4YMR138W TRM3Q07527 1436 aa9.06□□□□□ -0.96
CIN4YMR138W BUD3P25558 1636 aa9.06□□□□□ -0.96
CIN4YMR138W YBT1P32386 1661 aa9.06□□□□□ -0.96
CIN4YMR138W IFH1P39520 1085 aa9.03□□□□□ -0.96
CIN4YMR138W MMS1Q06211 1407 aa9.03□□□□□ -0.96
CIN4YMR138W DOP1Q03921 1698 aa9□□□□□ -0.97
CIN4YMR138W ARO1P08566 1588 aaKnown RBP8.99□□□□□ -0.97
CIN4YMR138W YSP2Q06681 1438 aa8.98□□□□□ -0.97
CIN4YMR138W IKI3Q06706 1349 aaKnown RBP8.93□□□□□ -0.98
CIN4YMR138W DNF2Q12675 1612 aa8.93□□□□□ -0.98
CIN4YMR138W SRB8P25648 1427 aa8.91□□□□□ -0.98
CIN4YMR138W CHC1P22137 1653 aaKnown RBP8.91□□□□□ -0.98
CIN4YMR138W SEC7P11075 2009 aaKnown RBP8.89□□□□□ -0.99
CIN4YMR138W BNR1P40450 1375 aa8.86□□□□□ -0.99
CIN4YMR138W CKB1P43639 278 aa8.84□□□□□ -0.99
CIN4YMR138W YOR093CQ12275 1648 aa8.8□□□□□ -1
CIN4YMR138W SSM4P40318 1319 aa8.8□□□□□ -1
CIN4YMR138W ABP1P15891 592 aaKnown RBP8.78□□□□□ -1
CIN4YMR138W MIF2P35201 549 aa8.77□□□□□ -1.01
CIN4YMR138W HAP1P0CE41 1502 aa8.74□□□□□ -1.01
CIN4YMR138W BUD21Q08492 214 aaPredicted RBP8.72□□□□□ -1.01
CIN4YMR138W YAP3P38749 330 aa8.7□□□□□ -1.02
CIN4YMR138W NUP188P52593 1655 aaKnown RBP8.69□□□□□ -1.02
CIN4YMR138W DNF3Q12674 1656 aa8.69□□□□□ -1.02
CIN4YMR138W PDR5P33302 1511 aaKnown RBP8.67□□□□□ -1.02
CIN4YMR138W VMR1P38735 1592 aa8.67□□□□□ -1.02
CIN4YMR138W URN1Q06525 465 aaKnown RBP8.67□□□□□ -1.02
CIN4YMR138W GCN2P15442 1659 aa8.66□□□□□ -1.02
CIN4YMR138W IPL1P38991 367 aa8.62□□□□□ -1.03
CIN4YMR138W IML1P47170 1584 aa8.61□□□□□ -1.03
CIN4YMR138W PDR11P40550 1411 aa8.58□□□□□ -1.04
CIN4YMR138W TYS1P36421 394 aaKnown RBP8.55□□□□□ -1.04
CIN4YMR138W MAK10Q02197 733 aa8.55□□□□□ -1.04
CIN4YMR138W RAV1P47104 1357 aa8.53□□□□□ -1.04
CIN4YMR138W YFR006WP43590 535 aa8.48□□□□□ -1.05
CIN4YMR138W RTC1Q08281 1341 aa8.47□□□□□ -1.05
CIN4YMR138W TY1B-NL2Q99337 1749 aaKnown RBP8.46□□□□□ -1.06
CIN4YMR138W PAF1P38351 445 aa8.43□□□□□ -1.06
CIN4YMR138W BFR2Q06631 534 aaKnown RBP8.43□□□□□ -1.06
CIN4YMR138W BCK1Q01389 1478 aa8.41□□□□□ -1.06
CIN4YMR138W CFT1Q06632 1357 aaKnown RBP8.41□□□□□ -1.06
CIN4YMR138W NUP192P47054 1683 aa8.4□□□□□ -1.06
CIN4YMR138W YMR196WQ04336 1088 aa8.39□□□□□ -1.07
CIN4YMR138W NOP7P53261 605 aaKnown RBP8.38□□□□□ -1.07
CIN4YMR138W USO1P25386 1790 aa8.35□□□□□ -1.07
CIN4YMR138W ALD4P46367 519 aaKnown RBP8.34□□□□□ -1.07
CIN4YMR138W KRE5P22023 1365 aa8.33□□□□□ -1.08
CIN4YMR138W RAD9P14737 1309 aa8.31□□□□□ -1.08
CIN4YMR138W TY3B-IQ7LHG5 1498 aaKnown RBP8.31□□□□□ -1.08
CIN4YMR138W THI12P42883 340 aa8.3□□□□□ -1.08
CIN4YMR138W THI5P43534 340 aa8.3□□□□□ -1.08
CIN4YMR138W THI11P47183 340 aa8.3□□□□□ -1.08
CIN4YMR138W THI13Q07748 340 aa8.3□□□□□ -1.08
CIN4YMR138W ESL2P36168 1195 aa8.29□□□□□ -1.08
CIN4YMR138W MRX12P47084 519 aa8.27□□□□□ -1.09
CIN4YMR138W YNR029CP53729 429 aaKnown RBP8.27□□□□□ -1.09
CIN4YMR138W RIA1P53893 1110 aa8.26□□□□□ -1.09
CIN4YMR138W CAB1Q04430 367 aa8.26□□□□□ -1.09
CIN4YMR138W TAF5P38129 798 aa8.22□□□□□ -1.09
CIN4YMR138W TAF8Q03750 510 aa8.2□□□□□ -1.1
CIN4YMR138W YLR419WQ06698 1435 aaKnown RBP8.2□□□□□ -1.1
CIN4YMR138W NAP1P25293 417 aaKnown RBP8.19□□□□□ -1.1
CIN4YMR138W PTP3P40048 928 aa8.17□□□□□ -1.1
CIN4YMR138W SPE2P21182 396 aa8.16□□□□□ -1.1
CIN4YMR138W PSK1P31374 1356 aa8.15□□□□□ -1.1
CIN4YMR138W CPS1P27614 576 aa8.15□□□□□ -1.1
CIN4YMR138W KIP3P53086 805 aaKnown RBP8.15□□□□□ -1.1
CIN4YMR138W SCT1P32784 759 aa8.12□□□□□ -1.11
CIN4YMR138W ADE6P38972 1358 aaKnown RBP8.11□□□□□ -1.11
CIN4YMR138W PPH3P32345 308 aa8.1□□□□□ -1.11
CIN4YMR138W RCM1P53972 490 aa8.1□□□□□ -1.11
Retrieved 100 of 5,963 RNA–protein pairs in 7.6 ms