RNA–Protein interactions for RNA: YMR117C

SPC24, Transcript of Component of the kinetochore-associated Ndc80 complex, yeastyeast

Gene SPC24, Length 642 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SPC24YMR117C SPP1Q03012 353 aa10.48□□□□□ -0.73
SPC24YMR117C BUD31P25337 157 aaPredicted RBP10.47□□□□□ -0.73
SPC24YMR117C TIF11P38912 153 aaKnown RBP10.47□□□□□ -0.73
SPC24YMR117C PBS2P08018 668 aa10.45□□□□□ -0.74
SPC24YMR117C YGR273CP53329 174 aa10.44□□□□□ -0.74
SPC24YMR117C ULI1P43604 169 aa10.42□□□□□ -0.74
SPC24YMR117C TRP5P00931 707 aaKnown RBP10.4□□□□□ -0.74
SPC24YMR117C DSF2P38213 736 aa10.4□□□□□ -0.74
SPC24YMR117C MAK21Q12176 1025 aaKnown RBP10.4□□□□□ -0.74
SPC24YMR117C SOL3P38858 249 aa10.39□□□□□ -0.75
SPC24YMR117C VHR2P40041 505 aa10.39□□□□□ -0.75
SPC24YMR117C YEL023CP39992 682 aa10.38□□□□□ -0.75
SPC24YMR117C UBP14P38237 781 aaKnown RBP10.35□□□□□ -0.75
SPC24YMR117C NST1P53935 1240 aa10.35□□□□□ -0.75
SPC24YMR117C YLR326WQ06170 240 aaKnown RBP10.35□□□□□ -0.75
SPC24YMR117C JIP4Q03361 876 aa10.34□□□□□ -0.75
SPC24YMR117C AI4P03878 556 aa10.33□□□□□ -0.76
SPC24YMR117C IOC2Q12072 812 aa10.33□□□□□ -0.76
SPC24YMR117C MAM3Q12296 706 aa10.33□□□□□ -0.76
SPC24YMR117C COX6P00427 148 aa10.32□□□□□ -0.76
SPC24YMR117C KEX1P09620 729 aa10.32□□□□□ -0.76
SPC24YMR117C MPH3P0CE00 602 aa10.31□□□□□ -0.76
SPC24YMR117C PTC4P38089 393 aa10.31□□□□□ -0.76
SPC24YMR117C KIC1P38692 1080 aa10.3□□□□□ -0.76
SPC24YMR117C RAD54P32863 898 aa10.29□□□□□ -0.76
SPC24YMR117C YDR090CQ03193 310 aa10.29□□□□□ -0.76
SPC24YMR117C LDB19Q12502 818 aa10.29□□□□□ -0.76
SPC24YMR117C YNL035CP53962 389 aaKnown RBP10.28□□□□□ -0.76
SPC24YMR117C LEO1P38439 464 aa10.27□□□□□ -0.77
SPC24YMR117C IES2P40154 320 aa10.26□□□□□ -0.77
SPC24YMR117C ILV3P39522 585 aaKnown RBP10.24□□□□□ -0.77
SPC24YMR117C DAN4P47179 1161 aa10.24□□□□□ -0.77
SPC24YMR117C RTG1P32607 177 aa10.23□□□□□ -0.77
SPC24YMR117C PCS60P38137 543 aaKnown RBP RIP-Chip data10.23□□□□□ -0.77not detected
SPC24YMR117C RPN1P38764 993 aaKnown RBP10.22□□□□□ -0.77
SPC24YMR117C SEC61P32915 480 aa10.21□□□□□ -0.77
SPC24YMR117C NUP42P49686 430 aaKnown RBP10.17□□□□□ -0.78
SPC24YMR117C YNR021WP53723 404 aaKnown RBP10.17□□□□□ -0.78
SPC24YMR117C TFG1P41895 735 aaPredicted RBP10.16□□□□□ -0.78
SPC24YMR117C SLI15P38283 698 aa10.15□□□□□ -0.78
SPC24YMR117C FKH1P40466 484 aa10.15□□□□□ -0.78
SPC24YMR117C NCR1Q12200 1170 aa10.13□□□□□ -0.79
SPC24YMR117C RPP1BP10622 106 aaKnown RBP10.12□□□□□ -0.79
SPC24YMR117C PML39Q03760 334 aa10.12□□□□□ -0.79
SPC24YMR117C DIT2P21595 489 aa10.11□□□□□ -0.79
SPC24YMR117C SIS1P25294 352 aaKnown RBP10.1□□□□□ -0.79
SPC24YMR117C ORC6P38826 435 aa10.09□□□□□ -0.79
SPC24YMR117C PSE1P32337 1089 aaKnown RBP10.07□□□□□ -0.8
SPC24YMR117C GLC3P32775 704 aa10.07□□□□□ -0.8
SPC24YMR117C YDL129WQ07555 291 aa10.07□□□□□ -0.8
SPC24YMR117C MID1P41821 548 aa10.06□□□□□ -0.8
SPC24YMR117C PEX29Q03370 554 aa10.05□□□□□ -0.8
SPC24YMR117C AIM7Q12156 149 aa10.05□□□□□ -0.8
SPC24YMR117C AIR2Q12476 344 aaKnown RBP10.04□□□□□ -0.8
SPC24YMR117C ATF2P53296 535 aa10.02□□□□□ -0.81
SPC24YMR117C CDC73Q06697 393 aa10.02□□□□□ -0.81
SPC24YMR117C DPL1Q05567 589 aa10.01□□□□□ -0.81
SPC24YMR117C CSC1Q06538 782 aa10.01□□□□□ -0.81
SPC24YMR117C MPC54Q08550 464 aa10.01□□□□□ -0.81
SPC24YMR117C GAP1P19145 602 aaPredicted RBP9.99□□□□□ -0.81
SPC24YMR117C SAP30P38429 201 aa9.98□□□□□ -0.81
SPC24YMR117C KIN1P13185 1064 aa9.96□□□□□ -0.82
SPC24YMR117C RGR1P19263 1082 aa9.96□□□□□ -0.82
SPC24YMR117C MVP1P40959 511 aaKnown RBP9.96□□□□□ -0.82
SPC24YMR117C PEX21P50091 288 aa9.96□□□□□ -0.82
SPC24YMR117C TFB4Q12004 338 aa9.96□□□□□ -0.82
SPC24YMR117C YJL171CP46992 396 aa9.95□□□□□ -0.82
SPC24YMR117C CLB5P30283 435 aa9.94□□□□□ -0.82
SPC24YMR117C BMT6Q12291 365 aa9.93□□□□□ -0.82
SPC24YMR117C ISU2Q12056 156 aa9.92□□□□□ -0.82
SPC24YMR117C TEA1P47988 759 aa9.91□□□□□ -0.82
SPC24YMR117C NMA111P53920 997 aa9.91□□□□□ -0.82
SPC24YMR117C ARH1P48360 493 aa9.89□□□□□ -0.83
SPC24YMR117C HAP5Q02516 242 aa9.88□□□□□ -0.83
SPC24YMR117C YPR109WQ06104 294 aa9.87□□□□□ -0.83
SPC24YMR117C TUM1Q08686 304 aaKnown RBP9.87□□□□□ -0.83
SPC24YMR117C ELP4Q02884 456 aaKnown RBP9.85□□□□□ -0.83
SPC24YMR117C YRR1Q12172 810 aa9.84□□□□□ -0.83
SPC24YMR117C YDR344CQ05510 147 aa9.81□□□□□ -0.84
SPC24YMR117C BNI4P53858 892 aa9.8□□□□□ -0.84
SPC24YMR117C PRE3P38624 215 aa9.79□□□□□ -0.84
SPC24YMR117C SPT23P35210 1082 aa9.78□□□□□ -0.84
SPC24YMR117C NIS1P53939 407 aa9.76□□□□□ -0.85
SPC24YMR117C YMR196WQ04336 1088 aa9.76□□□□□ -0.85
SPC24YMR117C CHL1P22516 861 aaPredicted RBP9.75□□□□□ -0.85
SPC24YMR117C GUA1P38625 525 aaKnown RBP9.74□□□□□ -0.85
SPC24YMR117C PDR1P12383 1068 aa9.73□□□□□ -0.85
SPC24YMR117C NUD1P32336 851 aa9.73□□□□□ -0.85
SPC24YMR117C PTC2P39966 464 aaKnown RBP9.73□□□□□ -0.85
SPC24YMR117C SSA2P10592 639 aaKnown RBP9.72□□□□□ -0.85
SPC24YMR117C CSN12P47130 423 aa9.72□□□□□ -0.85
SPC24YMR117C FPK1P53739 893 aa9.72□□□□□ -0.85
SPC24YMR117C SIT4P20604 311 aa9.7□□□□□ -0.86
SPC24YMR117C NPL4P33755 580 aa9.7□□□□□ -0.86
SPC24YMR117C HST2P53686 357 aa9.7□□□□□ -0.86
SPC24YMR117C HGH1P48362 394 aaKnown RBP9.69□□□□□ -0.86
SPC24YMR117C DMA2P53924 522 aa9.69□□□□□ -0.86
SPC24YMR117C HPC2Q01448 625 aa9.69□□□□□ -0.86
SPC24YMR117C GLN1P32288 370 aaKnown RBP9.68□□□□□ -0.86
SPC24YMR117C RTF1P53064 558 aa9.67□□□□□ -0.86
Retrieved 100 of 5,963 RNA–protein pairs in 12.2 ms