RNA–Protein interactions for RNA: YLR351C

NIT3, Transcript of Nit protein, yeastyeast

Gene NIT3, Length 876 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIT3YLR351C YGR273CP53329 174 aa8.41□□□□□ -1.06
NIT3YLR351C WSC3Q12215 556 aa8.41□□□□□ -1.06
NIT3YLR351C UBP14P38237 781 aaKnown RBP8.39□□□□□ -1.07
NIT3YLR351C VHR2P40041 505 aa8.39□□□□□ -1.07
NIT3YLR351C HTA1P04911 132 aaKnown RBP8.38□□□□□ -1.07
NIT3YLR351C HTA2P04912 132 aa8.38□□□□□ -1.07
NIT3YLR351C UBP9P39967 754 aa8.38□□□□□ -1.07
NIT3YLR351C SOL3P38858 249 aa8.37□□□□□ -1.07
NIT3YLR351C EAP1P36041 632 aaKnown RBP8.36□□□□□ -1.07
NIT3YLR351C YLR326WQ06170 240 aaKnown RBP8.36□□□□□ -1.07
NIT3YLR351C IES2P40154 320 aa8.35□□□□□ -1.07
NIT3YLR351C YDR090CQ03193 310 aa8.35□□□□□ -1.07
NIT3YLR351C YBL029C-AQ3E756 94 aa8.35□□□□□ -1.07
NIT3YLR351C VNX1P42839 908 aa8.34□□□□□ -1.07
NIT3YLR351C YNR021WP53723 404 aaKnown RBP8.34□□□□□ -1.07
NIT3YLR351C KEX1P09620 729 aa8.32□□□□□ -1.08
NIT3YLR351C KIC1P38692 1080 aa8.32□□□□□ -1.08
NIT3YLR351C NUP42P49686 430 aaKnown RBP8.32□□□□□ -1.08
NIT3YLR351C NST1P53935 1240 aa8.32□□□□□ -1.08
NIT3YLR351C RAD54P32863 898 aa8.3□□□□□ -1.08
NIT3YLR351C TRP5P00931 707 aaKnown RBP8.29□□□□□ -1.08
NIT3YLR351C AI4P03878 556 aa8.29□□□□□ -1.08
NIT3YLR351C MPH3P0CE00 602 aa8.29□□□□□ -1.08
NIT3YLR351C DIT2P21595 489 aa8.29□□□□□ -1.08
NIT3YLR351C TIF11P38912 153 aaKnown RBP8.29□□□□□ -1.08
NIT3YLR351C YEL023CP39992 682 aa8.29□□□□□ -1.08
NIT3YLR351C PCS60P38137 543 aaKnown RBP RIP-Chip data8.28□□□□□ -1.08not detected
NIT3YLR351C ULI1P43604 169 aa8.28□□□□□ -1.08
NIT3YLR351C SPP1Q03012 353 aa8.28□□□□□ -1.08
NIT3YLR351C PTC4P38089 393 aa8.27□□□□□ -1.09
NIT3YLR351C TAF7Q05021 590 aa8.26□□□□□ -1.09
NIT3YLR351C JIP4Q03361 876 aa8.25□□□□□ -1.09
NIT3YLR351C AIM7Q12156 149 aa8.25□□□□□ -1.09
NIT3YLR351C GLC3P32775 704 aa8.24□□□□□ -1.09
NIT3YLR351C DAN4P47179 1161 aa8.23□□□□□ -1.09
NIT3YLR351C IOC2Q12072 812 aa8.22□□□□□ -1.09
NIT3YLR351C KIN1P13185 1064 aa8.21□□□□□ -1.1
NIT3YLR351C ILV3P39522 585 aaKnown RBP8.21□□□□□ -1.1
NIT3YLR351C ATF2P53296 535 aa8.21□□□□□ -1.1
NIT3YLR351C PSE1P32337 1089 aaKnown RBP8.19□□□□□ -1.1
NIT3YLR351C YNL035CP53962 389 aaKnown RBP8.18□□□□□ -1.1
NIT3YLR351C SLI15P38283 698 aa8.16□□□□□ -1.1
NIT3YLR351C ORC6P38826 435 aa8.16□□□□□ -1.1
NIT3YLR351C RPP1BP10622 106 aaKnown RBP8.15□□□□□ -1.1
NIT3YLR351C BUD31P25337 157 aaPredicted RBP8.15□□□□□ -1.1
NIT3YLR351C LDB19Q12502 818 aa8.14□□□□□ -1.11
NIT3YLR351C RTG1P32607 177 aa8.12□□□□□ -1.11
NIT3YLR351C SEC61P32915 480 aa8.12□□□□□ -1.11
NIT3YLR351C DMA2P53924 522 aa8.11□□□□□ -1.11
NIT3YLR351C CSC1Q06538 782 aa8.1□□□□□ -1.11
NIT3YLR351C RGR1P19263 1082 aa8.09□□□□□ -1.11
NIT3YLR351C PML39Q03760 334 aa8.09□□□□□ -1.11
NIT3YLR351C GAP1P19145 602 aaPredicted RBP8.08□□□□□ -1.12
NIT3YLR351C MVP1P40959 511 aaKnown RBP8.08□□□□□ -1.12
NIT3YLR351C TFG1P41895 735 aaPredicted RBP8.07□□□□□ -1.12
NIT3YLR351C CDC73Q06697 393 aa8.07□□□□□ -1.12
NIT3YLR351C MID1P41821 548 aa8.06□□□□□ -1.12
NIT3YLR351C TEA1P47988 759 aa8.06□□□□□ -1.12
NIT3YLR351C NCR1Q12200 1170 aa8.06□□□□□ -1.12
NIT3YLR351C CLB5P30283 435 aa8.05□□□□□ -1.12
NIT3YLR351C DPL1Q05567 589 aa8.04□□□□□ -1.12
NIT3YLR351C TFB4Q12004 338 aa8.04□□□□□ -1.12
NIT3YLR351C GUA1P38625 525 aaKnown RBP8.03□□□□□ -1.12
NIT3YLR351C HGH1P48362 394 aaKnown RBP8.03□□□□□ -1.12
NIT3YLR351C PEX21P50091 288 aa8.03□□□□□ -1.12
NIT3YLR351C MPC54Q08550 464 aa8.02□□□□□ -1.13
NIT3YLR351C PEX29Q03370 554 aa8.01□□□□□ -1.13
NIT3YLR351C YPR109WQ06104 294 aa8.01□□□□□ -1.13
NIT3YLR351C YDL129WQ07555 291 aa8.01□□□□□ -1.13
NIT3YLR351C HPC2Q01448 625 aa7.99□□□□□ -1.13
NIT3YLR351C FKH1P40466 484 aa7.98□□□□□ -1.13
NIT3YLR351C ISU2Q12056 156 aa7.98□□□□□ -1.13
NIT3YLR351C SSA2P10592 639 aaKnown RBP7.97□□□□□ -1.13
NIT3YLR351C CSN12P47130 423 aa7.97□□□□□ -1.13
NIT3YLR351C NMA111P53920 997 aa7.97□□□□□ -1.13
NIT3YLR351C TUM1Q08686 304 aaKnown RBP7.97□□□□□ -1.13
NIT3YLR351C NIS1P53939 407 aa7.93□□□□□ -1.14
NIT3YLR351C YRR1Q12172 810 aa7.93□□□□□ -1.14
NIT3YLR351C SAP30P38429 201 aa7.92□□□□□ -1.14
NIT3YLR351C YMR196WQ04336 1088 aa7.92□□□□□ -1.14
NIT3YLR351C AIR2Q12476 344 aaKnown RBP7.92□□□□□ -1.14
NIT3YLR351C FPK1P53739 893 aa7.91□□□□□ -1.14
NIT3YLR351C BRL1P38770 471 aa7.9□□□□□ -1.14
NIT3YLR351C ARH1P48360 493 aa7.9□□□□□ -1.14
NIT3YLR351C HST2P53686 357 aa7.9□□□□□ -1.14
NIT3YLR351C GLN1P32288 370 aaKnown RBP7.89□□□□□ -1.15
NIT3YLR351C HAP5Q02516 242 aa7.89□□□□□ -1.15
NIT3YLR351C TFB3Q03290 321 aa7.89□□□□□ -1.15
NIT3YLR351C SIT4P20604 311 aa7.88□□□□□ -1.15
NIT3YLR351C TYW1Q08960 810 aaKnown RBP7.88□□□□□ -1.15
NIT3YLR351C SIS1P25294 352 aaKnown RBP7.87□□□□□ -1.15
NIT3YLR351C KTR1P27810 393 aaKnown RBP7.87□□□□□ -1.15
NIT3YLR351C MMP1Q12372 583 aa7.86□□□□□ -1.15
NIT3YLR351C ELP4Q02884 456 aaKnown RBP7.84□□□□□ -1.15
NIT3YLR351C RLF2Q12495 606 aa7.84□□□□□ -1.15
NIT3YLR351C NUD1P32336 851 aa7.83□□□□□ -1.16
NIT3YLR351C YJL171CP46992 396 aa7.83□□□□□ -1.16
NIT3YLR351C RTF1P53064 558 aa7.83□□□□□ -1.16
NIT3YLR351C BMT6Q12291 365 aa7.83□□□□□ -1.16
NIT3YLR351C SCJ1P25303 377 aa7.82□□□□□ -1.16
Retrieved 100 of 5,963 RNA–protein pairs in 31.5 ms