RNA–Protein interactions for RNA: YLR234W

TOP3, Transcript of DNA Topoisomerase III, yeastyeast

Gene TOP3, Length 1,971 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TOP3YLR234W RPA190P10964 1664 aaKnown RBP10.69□□□□□ -0.7
TOP3YLR234W PDR15Q04182 1529 aaKnown RBP10.67□□□□□ -0.7
TOP3YLR234W TAF7Q05021 590 aa10.66□□□□□ -0.7
TOP3YLR234W ULS1Q08562 1619 aa10.66□□□□□ -0.7
TOP3YLR234W TRM732Q03496 1420 aa10.65□□□□□ -0.71
TOP3YLR234W NTE1Q04958 1679 aa10.62□□□□□ -0.71
TOP3YLR234W SNT2P53127 1403 aa10.61□□□□□ -0.71
TOP3YLR234W RPO21P04050 1733 aaKnown RBP10.58□□□□□ -0.72
TOP3YLR234W GEA1P47102 1408 aaPredicted RBP10.55□□□□□ -0.72
TOP3YLR234W CAB3P36076 571 aa10.54□□□□□ -0.72
TOP3YLR234W IFH1P39520 1085 aa10.52□□□□□ -0.72
TOP3YLR234W NUP159P40477 1460 aa10.52□□□□□ -0.73
TOP3YLR234W GEA2P39993 1459 aaKnown RBP10.5□□□□□ -0.73
TOP3YLR234W EBP2P36049 427 aaKnown RBP10.5□□□□□ -0.73
TOP3YLR234W MET5P47169 1442 aa10.5□□□□□ -0.73
TOP3YLR234W TY3B-GQ99315 1547 aa10.48□□□□□ -0.73
TOP3YLR234W IRC20Q06554 1556 aa10.48□□□□□ -0.73
TOP3YLR234W YRF1-1P0CX20 1796 aa10.47□□□□□ -0.73
TOP3YLR234W YRF1-5P0CX21 1796 aa10.47□□□□□ -0.73
TOP3YLR234W YRF1-8P0CX22 1796 aa10.47□□□□□ -0.73
TOP3YLR234W RTT106P40161 455 aa10.46□□□□□ -0.74
TOP3YLR234W IKI3Q06706 1349 aaKnown RBP10.45□□□□□ -0.74
TOP3YLR234W NUP170P38181 1502 aa10.44□□□□□ -0.74
TOP3YLR234W YBT1P32386 1661 aa10.43□□□□□ -0.74
TOP3YLR234W VPS15P22219 1454 aa10.41□□□□□ -0.74
TOP3YLR234W PDR12Q02785 1511 aa10.39□□□□□ -0.75
TOP3YLR234W SPO14P36126 1683 aa10.38□□□□□ -0.75
TOP3YLR234W CAT8P39113 1433 aa10.37□□□□□ -0.75
TOP3YLR234W GDB1Q06625 1536 aa10.35□□□□□ -0.75
TOP3YLR234W MET10P39692 1035 aa10.35□□□□□ -0.75
TOP3YLR234W PDR10P51533 1564 aa10.34□□□□□ -0.75
TOP3YLR234W SSM4P40318 1319 aa10.32□□□□□ -0.76
TOP3YLR234W NUP157P40064 1391 aaKnown RBP10.3□□□□□ -0.76
TOP3YLR234W ARO1P08566 1588 aaKnown RBP10.3□□□□□ -0.76
TOP3YLR234W LTE1P07866 1435 aa10.26□□□□□ -0.77
TOP3YLR234W SRB8P25648 1427 aa10.22□□□□□ -0.77
TOP3YLR234W IQG1Q12280 1495 aa10.21□□□□□ -0.77
TOP3YLR234W BUD3P25558 1636 aa10.21□□□□□ -0.77
TOP3YLR234W YPR148CQ06523 435 aa10.21□□□□□ -0.78
TOP3YLR234W CKB1P43639 278 aa10.19□□□□□ -0.78
TOP3YLR234W YSP2Q06681 1438 aa10.17□□□□□ -0.78
TOP3YLR234W ENP1P38333 483 aaKnown RBP10.13□□□□□ -0.79
TOP3YLR234W DRS2P39524 1355 aa10.12□□□□□ -0.79
TOP3YLR234W DOP1Q03921 1698 aa10.11□□□□□ -0.79
TOP3YLR234W SIS2P36024 562 aa10.1□□□□□ -0.79
TOP3YLR234W MMS1Q06211 1407 aa10.1□□□□□ -0.79
TOP3YLR234W SEC7P11075 2009 aaKnown RBP10.1□□□□□ -0.79
TOP3YLR234W BNI1P41832 1953 aa10.09□□□□□ -0.79
TOP3YLR234W TRM3Q07527 1436 aa10.08□□□□□ -0.8
TOP3YLR234W GCN2P15442 1659 aa10.07□□□□□ -0.8
TOP3YLR234W BUD21Q08492 214 aaPredicted RBP10.06□□□□□ -0.8
TOP3YLR234W CHC1P22137 1653 aaKnown RBP10.06□□□□□ -0.8
TOP3YLR234W BNR1P40450 1375 aa10.06□□□□□ -0.8
TOP3YLR234W ITT1Q04638 464 aa10.04□□□□□ -0.8
TOP3YLR234W URN1Q06525 465 aaKnown RBP10.02□□□□□ -0.81
TOP3YLR234W YOR093CQ12275 1648 aa9.97□□□□□ -0.81
TOP3YLR234W PDR5P33302 1511 aaKnown RBP9.94□□□□□ -0.82
TOP3YLR234W VMR1P38735 1592 aa9.91□□□□□ -0.82
TOP3YLR234W NUP188P52593 1655 aaKnown RBP9.9□□□□□ -0.82
TOP3YLR234W DNF2Q12675 1612 aa9.88□□□□□ -0.83
TOP3YLR234W POL5P39985 1022 aaKnown RBP9.88□□□□□ -0.83
TOP3YLR234W NOP7P53261 605 aaKnown RBP9.85□□□□□ -0.83
TOP3YLR234W SPT7P35177 1332 aa9.85□□□□□ -0.83
TOP3YLR234W IML1P47170 1584 aa9.85□□□□□ -0.83
TOP3YLR234W PAF1P38351 445 aa9.83□□□□□ -0.84
TOP3YLR234W PDR11P40550 1411 aa9.83□□□□□ -0.84
TOP3YLR234W MNN4P36044 1178 aa9.82□□□□□ -0.84
TOP3YLR234W TCB2P48231 1178 aa9.8□□□□□ -0.84
TOP3YLR234W RAV1P47104 1357 aa9.79□□□□□ -0.84
TOP3YLR234W SEC3P33332 1336 aaKnown RBP9.78□□□□□ -0.84
TOP3YLR234W TFA1P36100 482 aa9.77□□□□□ -0.84
TOP3YLR234W AVT3P36062 692 aa9.77□□□□□ -0.85
TOP3YLR234W PRS1P32895 427 aaKnown RBP9.76□□□□□ -0.85
TOP3YLR234W CLC1P17891 233 aa9.75□□□□□ -0.85
TOP3YLR234W RTC1Q08281 1341 aa9.75□□□□□ -0.85
TOP3YLR234W IPL1P38991 367 aa9.74□□□□□ -0.85
TOP3YLR234W TYS1P36421 394 aaKnown RBP9.73□□□□□ -0.85
TOP3YLR234W YAP3P38749 330 aa9.73□□□□□ -0.85
TOP3YLR234W NUP192P47054 1683 aa9.71□□□□□ -0.86
TOP3YLR234W DNF3Q12674 1656 aa9.71□□□□□ -0.86
TOP3YLR234W LEO1P38439 464 aa9.7□□□□□ -0.86
TOP3YLR234W IME2P32581 645 aa9.68□□□□□ -0.86
TOP3YLR234W HAP1P0CE41 1502 aa9.68□□□□□ -0.86
TOP3YLR234W TY3B-IQ7LHG5 1498 aaKnown RBP9.67□□□□□ -0.86
TOP3YLR234W YFR016CP43597 1233 aaKnown RBP9.64□□□□□ -0.87
TOP3YLR234W ABP1P15891 592 aaKnown RBP9.64□□□□□ -0.87
TOP3YLR234W AIM44Q99299 758 aa9.63□□□□□ -0.87
TOP3YLR234W TAF5P38129 798 aa9.63□□□□□ -0.87
TOP3YLR234W ESL2P36168 1195 aa9.62□□□□□ -0.87
TOP3YLR234W EAF7P53911 425 aaKnown RBP9.6□□□□□ -0.87
TOP3YLR234W ORC1P54784 914 aaPredicted RBP9.59□□□□□ -0.87
TOP3YLR234W BCK1Q01389 1478 aa9.58□□□□□ -0.88
TOP3YLR234W LEU3P08638 886 aa9.57□□□□□ -0.88
TOP3YLR234W CFT1Q06632 1357 aaKnown RBP9.57□□□□□ -0.88
TOP3YLR234W YLR419WQ06698 1435 aaKnown RBP9.57□□□□□ -0.88
TOP3YLR234W RAD9P14737 1309 aa9.56□□□□□ -0.88
TOP3YLR234W KIP3P53086 805 aaKnown RBP9.55□□□□□ -0.88
TOP3YLR234W MHP1P43638 1398 aa9.55□□□□□ -0.88
TOP3YLR234W OPY1P38271 328 aa9.55□□□□□ -0.88
TOP3YLR234W ALD4P46367 519 aaKnown RBP9.55□□□□□ -0.88
Retrieved 100 of 5,963 RNA–protein pairs in 11.6 ms