RNA–Protein interactions for RNA: YLR199C

PBA1, Transcript of Protein involved in 20S proteasome assembly, yeastyeast

Gene PBA1, Length 831 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PBA1YLR199C HTA2P04912 132 aa8.1□□□□□ -1.11
PBA1YLR199C RCR1P38212 213 aa8.08□□□□□ -1.12
PBA1YLR199C DCW1P36091 449 aa8.07□□□□□ -1.12
PBA1YLR199C PTC4P38089 393 aa8.07□□□□□ -1.12
PBA1YLR199C YEL023CP39992 682 aa8.05□□□□□ -1.12
PBA1YLR199C XDJ1P39102 459 aa7.99□□□□□ -1.13
PBA1YLR199C VRP1P37370 817 aa7.98□□□□□ -1.13
PBA1YLR199C YDR344CQ05510 147 aa7.94□□□□□ -1.14
PBA1YLR199C ELP4Q02884 456 aaKnown RBP7.91□□□□□ -1.14
PBA1YLR199C PML39Q03760 334 aa7.91□□□□□ -1.14
PBA1YLR199C GRE2Q12068 342 aaKnown RBP7.89□□□□□ -1.15
PBA1YLR199C DPS1P04802 557 aaKnown RBP7.86□□□□□ -1.15
PBA1YLR199C ARH1P48360 493 aa7.83□□□□□ -1.16
PBA1YLR199C ATH1P48016 1211 aa7.79□□□□□ -1.16
PBA1YLR199C GUT1P32190 709 aa7.78□□□□□ -1.16
PBA1YLR199C MIF2P35201 549 aa7.76□□□□□ -1.17
PBA1YLR199C MID1P41821 548 aa7.76□□□□□ -1.17
PBA1YLR199C PTC3P34221 468 aaKnown RBP7.75□□□□□ -1.17
PBA1YLR199C NST1P53935 1240 aa7.75□□□□□ -1.17
PBA1YLR199C SPT23P35210 1082 aa7.74□□□□□ -1.17
PBA1YLR199C EDS1P38073 919 aa7.73□□□□□ -1.17
PBA1YLR199C MAK11P20484 414 aaKnown RBP7.72□□□□□ -1.17
PBA1YLR199C PEX29Q03370 554 aa7.71□□□□□ -1.18
PBA1YLR199C SRC1Q03707 834 aa7.69□□□□□ -1.18
PBA1YLR199C RGA2Q06407 1009 aa7.69□□□□□ -1.18
PBA1YLR199C AI4P03878 556 aa7.67□□□□□ -1.18
PBA1YLR199C SOL3P38858 249 aa7.67□□□□□ -1.18
PBA1YLR199C MPH3P0CE00 602 aa7.66□□□□□ -1.18
PBA1YLR199C HAP5Q02516 242 aa7.66□□□□□ -1.18
PBA1YLR199C RAM2P29703 316 aa7.65□□□□□ -1.18
PBA1YLR199C BNI4P53858 892 aa7.64□□□□□ -1.19
PBA1YLR199C YML082WQ04533 649 aaKnown RBP7.62□□□□□ -1.19
PBA1YLR199C COQ8P27697 501 aa7.61□□□□□ -1.19
PBA1YLR199C ILV3P39522 585 aaKnown RBP7.61□□□□□ -1.19
PBA1YLR199C PTC2P39966 464 aaKnown RBP7.6□□□□□ -1.19
PBA1YLR199C RGA1P39083 1007 aa7.58□□□□□ -1.2
PBA1YLR199C MPC54Q08550 464 aa7.56□□□□□ -1.2
PBA1YLR199C YGR273CP53329 174 aa7.52□□□□□ -1.21
PBA1YLR199C NMA111P53920 997 aa7.5□□□□□ -1.21
PBA1YLR199C RAS1P01119 309 aa7.48□□□□□ -1.21
PBA1YLR199C NOP53Q12080 455 aaKnown RBP7.47□□□□□ -1.21
PBA1YLR199C SLI15P38283 698 aa7.45□□□□□ -1.22
PBA1YLR199C DPL1Q05567 589 aa7.45□□□□□ -1.22
PBA1YLR199C YPR015CQ12531 247 aa7.43□□□□□ -1.22
PBA1YLR199C RAM1P22007 431 aa7.39□□□□□ -1.23
PBA1YLR199C TRK1P12685 1235 aa7.37□□□□□ -1.23
PBA1YLR199C AMS1P22855 1083 aa7.36□□□□□ -1.23
PBA1YLR199C ISU2Q12056 156 aa7.36□□□□□ -1.23
PBA1YLR199C GYP1Q08484 637 aa7.35□□□□□ -1.23
PBA1YLR199C KEX1P09620 729 aa7.31□□□□□ -1.24
PBA1YLR199C CDC73Q06697 393 aa7.28□□□□□ -1.24
PBA1YLR199C SDH2P21801 266 aa7.27□□□□□ -1.25
PBA1YLR199C SAS4Q04003 481 aa7.27□□□□□ -1.25
PBA1YLR199C PDR1P12383 1068 aa7.25□□□□□ -1.25
PBA1YLR199C YEL077CQ3E7X8 1277 aa7.22□□□□□ -1.25
PBA1YLR199C YPL062WQ02781 134 aa7.19□□□□□ -1.26
PBA1YLR199C YLR326WQ06170 240 aaKnown RBP7.19□□□□□ -1.26
PBA1YLR199C MRF1P30775 413 aaPredicted RBP7.16□□□□□ -1.26
PBA1YLR199C UBP14P38237 781 aaKnown RBP7.16□□□□□ -1.26
PBA1YLR199C RPP1BP10622 106 aaKnown RBP7.14□□□□□ -1.27
PBA1YLR199C PCS60P38137 543 aaKnown RBP RIP-Chip data7.14□□□□□ -1.27 RIP-Chip
PBA1YLR199C VHR2P40041 505 aa7.14□□□□□ -1.27
PBA1YLR199C RAD54P32863 898 aa7.12□□□□□ -1.27
PBA1YLR199C BUD20Q08004 166 aaPredicted RBP7.1□□□□□ -1.27
PBA1YLR199C PRT1P06103 763 aaKnown RBP7.09□□□□□ -1.27
PBA1YLR199C BRE2P43132 505 aa7.08□□□□□ -1.28
PBA1YLR199C SET1P38827 1080 aaKnown RBP7.07□□□□□ -1.28
PBA1YLR199C ERG12P07277 443 aa7.05□□□□□ -1.28
PBA1YLR199C YRR1Q12172 810 aa7.05□□□□□ -1.28
PBA1YLR199C STR2P47164 639 aa7.04□□□□□ -1.28
PBA1YLR199C GCR2Q01722 534 aa7.03□□□□□ -1.28
PBA1YLR199C AIR1P40507 360 aaKnown RBP7.02□□□□□ -1.29
PBA1YLR199C PEX21P50091 288 aa7.02□□□□□ -1.29
PBA1YLR199C GAR1P28007 205 aaKnown RBP7.01□□□□□ -1.29
PBA1YLR199C ISM1P48526 1002 aa7.01□□□□□ -1.29
PBA1YLR199C GBP2P25555 427 aaKnown RBP RIP-Chip data7□□□□□ -1.29not detected
PBA1YLR199C CST6P40535 587 aa7□□□□□ -1.29
PBA1YLR199C CLA4P48562 842 aa6.99□□□□□ -1.29
PBA1YLR199C GAP1P19145 602 aaPredicted RBP6.98□□□□□ -1.29
PBA1YLR199C NUD1P32336 851 aa6.98□□□□□ -1.29
PBA1YLR199C YDR090CQ03193 310 aa6.98□□□□□ -1.29
PBA1YLR199C KIC1P38692 1080 aa6.97□□□□□ -1.29
PBA1YLR199C TFB4Q12004 338 aa6.97□□□□□ -1.29
PBA1YLR199C CSC1Q06538 782 aa6.96□□□□□ -1.3
PBA1YLR199C LAM6Q08001 693 aa6.96□□□□□ -1.3
PBA1YLR199C TUM1Q08686 304 aaKnown RBP6.94□□□□□ -1.3
PBA1YLR199C RQC2Q12532 1038 aaKnown RBP6.94□□□□□ -1.3
PBA1YLR199C NPL4P33755 580 aa6.93□□□□□ -1.3
PBA1YLR199C SPT16P32558 1035 aaKnown RBP6.92□□□□□ -1.3
PBA1YLR199C CDC4P07834 779 aa6.91□□□□□ -1.3
PBA1YLR199C TY1A-DR4O74302 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-HP0C2I4 478 aaKnown RBP6.9□□□□□ -1.3
PBA1YLR199C TY1A-AP0CX57 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-PR1P0CX58 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-ORP0CX59 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-PR2P0CX60 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-DR5P0CX65 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-ER2P0CX66 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-GR3P0CX67 440 aa6.9□□□□□ -1.3
PBA1YLR199C TY1A-LR1P0CX68 440 aa6.9□□□□□ -1.3
Retrieved 100 of 5,963 RNA–protein pairs in 16.5 ms